RNA–Protein interactions for RNA: ENST00000548709.1

ERBB3-206, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-206ENST00000548709 ZNF330Q9Y3S2 320 aaPredicted RBP9.84□□□□□ -0.83
ERBB3-206ENST00000548709 KIF20BQ96Q89 1820 aa9.84□□□□□ -0.83
ERBB3-206ENST00000548709 ANKRD26Q9UPS8 1709 aa9.83□□□□□ -0.84
ERBB3-206ENST00000548709 CAMTA2O94983 1202 aa9.83□□□□□ -0.84
ERBB3-206ENST00000548709 EPHX2P34913 555 aa9.83□□□□□ -0.84
ERBB3-206ENST00000548709 ECE1P42892 770 aa9.83□□□□□ -0.84
ERBB3-206ENST00000548709 LBX1P52954 281 aa9.83□□□□□ -0.84
ERBB3-206ENST00000548709 TRIM26Q12899 539 aaPredicted RBP9.83□□□□□ -0.84
ERBB3-206ENST00000548709 EAPPQ56P03 285 aaPredicted RBP9.83□□□□□ -0.84
ERBB3-206ENST00000548709 DZIP3Q86Y13 1208 aaKnown RBP9.83□□□□□ -0.84
ERBB3-206ENST00000548709 CNTROBQ8N137 903 aa9.83□□□□□ -0.84
ERBB3-206ENST00000548709 JDP2Q8WYK2 163 aa9.83□□□□□ -0.84
ERBB3-206ENST00000548709 PCDH10Q9P2E7 1040 aa9.83□□□□□ -0.84
ERBB3-206ENST00000548709 HEG1Q9ULI3 1381 aa9.83□□□□□ -0.84
ERBB3-206ENST00000548709 SLC34A2O95436 690 aa9.82□□□□□ -0.84
ERBB3-206ENST00000548709 POTEIP0CG38 1075 aa9.82□□□□□ -0.84
ERBB3-206ENST00000548709 POTEJP0CG39 1038 aa9.82□□□□□ -0.84
ERBB3-206ENST00000548709 HSPA5P11021 654 aaKnown RBP9.82□□□□□ -0.84
ERBB3-206ENST00000548709 AMER1Q5JTC6 1135 aaPredicted RBP9.82□□□□□ -0.84
ERBB3-206ENST00000548709 GPC2Q8N158 579 aa9.82□□□□□ -0.84
ERBB3-206ENST00000548709 WDR33Q9C0J8 1336 aaKnown RBP9.82□□□□□ -0.84
ERBB3-206ENST00000548709 MYH14Q7Z406 1995 aaKnown RBP9.81□□□□□ -0.84
ERBB3-206ENST00000548709 BTBD11A6QL63 1104 aa9.81□□□□□ -0.84
ERBB3-206ENST00000548709 FZD9O00144 591 aa9.81□□□□□ -0.84
ERBB3-206ENST00000548709 A1BGP04217 495 aa9.81□□□□□ -0.84
ERBB3-206ENST00000548709 GTF2E1P29083 439 aaPredicted RBP9.81□□□□□ -0.84
ERBB3-206ENST00000548709 IL17REQ8NFR9 667 aa9.81□□□□□ -0.84
ERBB3-206ENST00000548709 ABHD8Q96I13 439 aa9.81□□□□□ -0.84
ERBB3-206ENST00000548709 COL5A3P25940 1745 aaPredicted RBP9.8□□□□□ -0.84
ERBB3-206ENST00000548709 CA12O43570 354 aa9.8□□□□□ -0.84
ERBB3-206ENST00000548709 SNRPA1P09661 255 aaKnown RBP9.8□□□□□ -0.84
ERBB3-206ENST00000548709 LMOD1P29536 600 aaPredicted RBP9.8□□□□□ -0.84
ERBB3-206ENST00000548709 IARSP41252 1262 aaKnown RBP9.8□□□□□ -0.84
ERBB3-206ENST00000548709 EIF6P56537 245 aaKnown RBP9.8□□□□□ -0.84
ERBB3-206ENST00000548709 CCDC24Q8N4L8 307 aa9.8□□□□□ -0.84
ERBB3-206ENST00000548709 PSMD1Q99460 953 aa9.8□□□□□ -0.84
ERBB3-206ENST00000548709 ABT1Q9ULW3 272 aaKnown RBP9.8□□□□□ -0.84
ERBB3-206ENST00000548709 BRCA1P38398 1863 aaKnown RBP9.8□□□□□ -0.84
ERBB3-206ENST00000548709 MRC1P22897 1456 aa9.79□□□□□ -0.84
ERBB3-206ENST00000548709 HSPA8P11142 646 aaKnown RBP9.79□□□□□ -0.84
ERBB3-206ENST00000548709 MAP2K2P36507 400 aa9.79□□□□□ -0.84
ERBB3-206ENST00000548709 RGS19P49795 217 aa9.79□□□□□ -0.84
ERBB3-206ENST00000548709 MLLT1Q03111 559 aaPredicted RBP9.79□□□□□ -0.84
ERBB3-206ENST00000548709 SYNE4Q8N205 404 aa9.79□□□□□ -0.84
ERBB3-206ENST00000548709 NYXQ9GZU5 481 aa9.79□□□□□ -0.84
ERBB3-206ENST00000548709 TMX4Q9H1E5 349 aaPredicted RBP9.79□□□□□ -0.84
ERBB3-206ENST00000548709 DDX21Q9NR30 783 aaKnown RBP eCLIP9.79□□□□□ -0.84
ERBB3-206ENST00000548709 ZNF277Q9NRM2 450 aaPredicted RBP9.79□□□□□ -0.84
ERBB3-206ENST00000548709 NIP7Q9Y221 180 aaKnown RBP eCLIP9.79□□□□□ -0.84
ERBB3-206ENST00000548709 U2SURPO15042 1029 aaKnown RBP9.78□□□□□ -0.84
ERBB3-206ENST00000548709 MAP1SQ66K74 1059 aaPredicted RBP9.78□□□□□ -0.84
ERBB3-206ENST00000548709 USP50Q70EL3 339 aaPredicted RBP9.78□□□□□ -0.84
ERBB3-206ENST00000548709 RTF1Q92541 710 aaKnown RBP9.78□□□□□ -0.84
ERBB3-206ENST00000548709 GPR101Q96P66 508 aaPredicted RBP9.78□□□□□ -0.84
ERBB3-206ENST00000548709 VPS33BQ9H267 617 aa9.78□□□□□ -0.84
ERBB3-206ENST00000548709 NUDCQ9Y266 331 aa9.78□□□□□ -0.84
ERBB3-206ENST00000548709 USP16Q9Y5T5 823 aa9.78□□□□□ -0.84
ERBB3-206ENST00000548709 ERVV-1B6SEH8 477 aa9.76□□□□□ -0.85
ERBB3-206ENST00000548709 PER1O15534 1290 aaPredicted RBP9.76□□□□□ -0.85
ERBB3-206ENST00000548709 HTATSF1O43719 755 aaKnown RBP9.76□□□□□ -0.85
ERBB3-206ENST00000548709 FAM161AQ3B820 660 aa9.76□□□□□ -0.85
ERBB3-206ENST00000548709 HHIPL1Q96JK4 782 aa9.76□□□□□ -0.85
ERBB3-206ENST00000548709 CAPNS2Q96L46 248 aa9.76□□□□□ -0.85
ERBB3-206ENST00000548709 CFAP53Q96M91 514 aa9.76□□□□□ -0.85
ERBB3-206ENST00000548709 SBF1O95248 1867 aa9.76□□□□□ -0.85
ERBB3-206ENST00000548709 RNF123Q5XPI4 1314 aa9.76□□□□□ -0.85
ERBB3-206ENST00000548709 ZNF541Q9H0D2 1346 aa9.76□□□□□ -0.85
ERBB3-206ENST00000548709 NRXN2Q9P2S2 1712 aa9.76□□□□□ -0.85
ERBB3-206ENST00000548709 CEMIPQ8WUJ3 1361 aa9.75□□□□□ -0.85
ERBB3-206ENST00000548709 CCDC85CA6NKD9 419 aa9.75□□□□□ -0.85
ERBB3-206ENST00000548709 HOXA10P31260 410 aaPredicted RBP9.75□□□□□ -0.85
ERBB3-206ENST00000548709 CRY2Q49AN0 593 aa9.75□□□□□ -0.85
ERBB3-206ENST00000548709 PAXIP1Q6ZW49 1069 aaPredicted RBP9.75□□□□□ -0.85
ERBB3-206ENST00000548709 LARGE2Q8N3Y3 721 aa9.75□□□□□ -0.85
ERBB3-206ENST00000548709 RPGRQ92834 1020 aaKnown RBP9.75□□□□□ -0.85
ERBB3-206ENST00000548709 GJA3Q9Y6H8 435 aa9.75□□□□□ -0.85
ERBB3-206ENST00000548709 ADAMTS7Q9UKP4 1686 aa9.74□□□□□ -0.85
ERBB3-206ENST00000548709 TJP1Q07157 1748 aa9.74□□□□□ -0.85
ERBB3-206ENST00000548709 CC2D1BQ5T0F9 858 aaKnown RBP9.74□□□□□ -0.85
ERBB3-206ENST00000548709 RBM17Q96I25 401 aaKnown RBP9.74□□□□□ -0.85
ERBB3-206ENST00000548709 CRAMP1Q96RY5 1269 aa9.74□□□□□ -0.85
ERBB3-206ENST00000548709 TLL2Q9Y6L7 1015 aa9.74□□□□□ -0.85
ERBB3-206ENST00000548709 NPC1L1Q9UHC9 1359 aa9.74□□□□□ -0.85
ERBB3-206ENST00000548709 TAF7Q15545 349 aaPredicted RBP9.73□□□□□ -0.85
ERBB3-206ENST00000548709 NIM1KQ8IY84 436 aa9.73□□□□□ -0.85
ERBB3-206ENST00000548709 SUPT20HQ8NEM7 779 aa9.73□□□□□ -0.85
ERBB3-206ENST00000548709 PNISRQ8TF01 805 aaKnown RBP9.73□□□□□ -0.85
ERBB3-206ENST00000548709 ZC3H15Q8WU90 426 aaKnown RBP9.73□□□□□ -0.85
ERBB3-206ENST00000548709 ADARB2Q9NS39 739 aaKnown RBP9.73□□□□□ -0.85
ERBB3-206ENST00000548709 KIF7Q2M1P5 1343 aa9.73□□□□□ -0.85
ERBB3-206ENST00000548709 KCNQ3O43525 872 aa9.72□□□□□ -0.85
ERBB3-206ENST00000548709 NEFMP07197 916 aa9.72□□□□□ -0.85
ERBB3-206ENST00000548709 PRKAR2BP31323 418 aa9.72□□□□□ -0.85
ERBB3-206ENST00000548709 EPS15P42566 896 aa9.72□□□□□ -0.85
ERBB3-206ENST00000548709 BRPF1P55201 1214 aaPredicted RBP9.72□□□□□ -0.85
ERBB3-206ENST00000548709 CST9Q5W186 159 aa9.72□□□□□ -0.85
ERBB3-206ENST00000548709 PCGF6Q9BYE7 350 aa9.72□□□□□ -0.85
ERBB3-206ENST00000548709 FAM177BA6PVY3 158 aa9.71□□□□□ -0.86
ERBB3-206ENST00000548709 SCNN1DP51172 638 aa9.71□□□□□ -0.86
ERBB3-206ENST00000548709 TNIP1Q15025 636 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms