RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 KIAA1211Q6ZU35 1233 aa19.43■□□□□ 0.7
CNOT2-209ENST00000548159 RUFY3Q7L099 469 aa19.43■□□□□ 0.7
CNOT2-209ENST00000548159 CHMP4AQ9BY43 222 aa19.43■□□□□ 0.7
CNOT2-209ENST00000548159 USP42Q9H9J4 1324 aaKnown RBP19.42■□□□□ 0.7
CNOT2-209ENST00000548159 ZC3H6P61129 1189 aaKnown RBP19.42■□□□□ 0.7
CNOT2-209ENST00000548159 DDX54Q8TDD1 881 aaKnown RBP19.42■□□□□ 0.7
CNOT2-209ENST00000548159 SUCLG2Q96I99 432 aa19.42■□□□□ 0.7
CNOT2-209ENST00000548159 TTC41PQ6P2S7 1318 aa19.42■□□□□ 0.7
CNOT2-209ENST00000548159 ALDH1L1O75891 902 aa19.42■□□□□ 0.7
CNOT2-209ENST00000548159 ECHDC1Q9NTX5 307 aa19.42■□□□□ 0.7
CNOT2-209ENST00000548159 ADCK5Q3MIX3 580 aa19.41■□□□□ 0.7
CNOT2-209ENST00000548159 DIAPH3Q9NSV4 1193 aa19.41■□□□□ 0.7
CNOT2-209ENST00000548159 SASH1O94885 1247 aa19.41■□□□□ 0.7
CNOT2-209ENST00000548159 LARGE1O95461 756 aa19.41■□□□□ 0.7
CNOT2-209ENST00000548159 PDIA6Q15084 440 aa19.41■□□□□ 0.7
CNOT2-209ENST00000548159 TPRNQ4KMQ1 711 aa19.41■□□□□ 0.7
CNOT2-209ENST00000548159 AACSQ86V21 672 aa19.41■□□□□ 0.7
CNOT2-209ENST00000548159 RNF214Q8ND24 703 aa19.41■□□□□ 0.7
CNOT2-209ENST00000548159 BICC1Q9H694 974 aaKnown RBP19.41■□□□□ 0.7
CNOT2-209ENST00000548159 TCHHQ07283 1943 aa19.4■□□□□ 0.7
CNOT2-209ENST00000548159 RPAP1Q9BWH6 1393 aaPredicted RBP19.4■□□□□ 0.7
CNOT2-209ENST00000548159 IFIT2P09913 472 aaKnown RBP19.4■□□□□ 0.7
CNOT2-209ENST00000548159 CASTP20810 708 aaKnown RBP19.4■□□□□ 0.7
CNOT2-209ENST00000548159 USP48Q86UV5 1035 aa19.4■□□□□ 0.7
CNOT2-209ENST00000548159 GRM8O00222 908 aa19.4■□□□□ 0.7
CNOT2-209ENST00000548159 MBD3O95983 291 aa19.4■□□□□ 0.7
CNOT2-209ENST00000548159 KRT28Q7Z3Y7 464 aa19.4■□□□□ 0.7
CNOT2-209ENST00000548159 KLHDC4Q8TBB5 520 aa19.4■□□□□ 0.7
CNOT2-209ENST00000548159 CCDC8Q9H0W5 538 aaPredicted RBP19.4■□□□□ 0.7
CNOT2-209ENST00000548159 EAF2Q96CJ1 260 aaPredicted RBP19.39■□□□□ 0.69
CNOT2-209ENST00000548159 SIL1Q9H173 461 aa19.39■□□□□ 0.69
CNOT2-209ENST00000548159 PHRF1Q9P1Y6 1649 aaKnown RBP19.39■□□□□ 0.69
CNOT2-209ENST00000548159 NCAPD2Q15021 1401 aa19.39■□□□□ 0.69
CNOT2-209ENST00000548159 COL9A3Q14050 684 aaPredicted RBP19.39■□□□□ 0.69
CNOT2-209ENST00000548159 PRPF40BQ6NWY9 871 aaKnown RBP19.39■□□□□ 0.69
CNOT2-209ENST00000548159 LINS1Q8NG48 757 aa19.39■□□□□ 0.69
CNOT2-209ENST00000548159 HYPKQ9NX55 129 aa19.39■□□□□ 0.69
CNOT2-209ENST00000548159 TLR7Q9NYK1 1049 aaKnown RBP19.39■□□□□ 0.69
CNOT2-209ENST00000548159 WDR33Q9C0J8 1336 aaKnown RBP19.38■□□□□ 0.69
CNOT2-209ENST00000548159 IGKV5-2P06315 115 aa19.38■□□□□ 0.69
CNOT2-209ENST00000548159 MYL6BP14649 208 aa19.38■□□□□ 0.69
CNOT2-209ENST00000548159 LIMCH1Q9UPQ0 1083 aa19.38■□□□□ 0.69
CNOT2-209ENST00000548159 ZSCAN30Q86W11 494 aa19.38■□□□□ 0.69
CNOT2-209ENST00000548159 PDLIM2Q96JY6 352 aa19.38■□□□□ 0.69
CNOT2-209ENST00000548159 DDX21Q9NR30 783 aaKnown RBP eCLIP19.38■□□□□ 0.69
CNOT2-209ENST00000548159 FAM227BQ96M60 508 aa19.37■□□□□ 0.69
CNOT2-209ENST00000548159 SYT1P21579 422 aa19.36■□□□□ 0.69
CNOT2-209ENST00000548159 PIP4K2AP48426 406 aaPredicted RBP19.36■□□□□ 0.69
CNOT2-209ENST00000548159 JARID2Q92833 1246 aaPredicted RBP19.36■□□□□ 0.69
CNOT2-209ENST00000548159 JAKMIP1Q96N16 626 aaKnown RBP19.36■□□□□ 0.69
CNOT2-209ENST00000548159 SLIT3O75094 1523 aa19.36■□□□□ 0.69
CNOT2-209ENST00000548159 NFATC2IPQ8NCF5 419 aa19.36■□□□□ 0.69
CNOT2-209ENST00000548159 DDX17Q92841 729 aaKnown RBP19.36■□□□□ 0.69
CNOT2-209ENST00000548159 CNPY2Q9Y2B0 182 aa19.36■□□□□ 0.69
CNOT2-209ENST00000548159 CRYBG1Q9Y4K1 1723 aa19.36■□□□□ 0.69
CNOT2-209ENST00000548159 ERBB3P21860 1342 aa19.36■□□□□ 0.69
CNOT2-209ENST00000548159 ZNF790Q6PG37 636 aa19.35■□□□□ 0.69
CNOT2-209ENST00000548159 RGPD5Q99666 1765 aa19.35■□□□□ 0.69
CNOT2-209ENST00000548159 RIC3Q7Z5B4 369 aa19.35■□□□□ 0.69
CNOT2-209ENST00000548159 EPHA10Q5JZY3 1008 aa19.34■□□□□ 0.69
CNOT2-209ENST00000548159 ERC1Q8IUD2 1116 aa19.34■□□□□ 0.69
CNOT2-209ENST00000548159 CCDC83Q8IWF9 413 aa19.34■□□□□ 0.69
CNOT2-209ENST00000548159 RUFY2Q8WXA3 655 aa19.34■□□□□ 0.69
CNOT2-209ENST00000548159 G3BP1Q13283 466 aaKnown RBP eCLIP19.34■□□□□ 0.69
CNOT2-209ENST00000548159 EVI5LQ96CN4 794 aa19.34■□□□□ 0.69
CNOT2-209ENST00000548159 BOLA2Q9H3K6 86 aa19.34■□□□□ 0.69
CNOT2-209ENST00000548159 NLRP2Q9NX02 1062 aa19.34■□□□□ 0.69
CNOT2-209ENST00000548159 STX6O43752 255 aa19.33■□□□□ 0.69
CNOT2-209ENST00000548159 ZSCAN22P10073 491 aaPredicted RBP19.33■□□□□ 0.69
CNOT2-209ENST00000548159 PRKCSHP14314 528 aaPredicted RBP19.33■□□□□ 0.69
CNOT2-209ENST00000548159 NECTIN1Q15223 517 aa19.33■□□□□ 0.69
CNOT2-209ENST00000548159 GPATCH3Q96I76 525 aa19.33■□□□□ 0.69
CNOT2-209ENST00000548159 UTYO14607 1347 aa19.33■□□□□ 0.69
CNOT2-209ENST00000548159 NPHP4O75161 1426 aaPredicted RBP19.33■□□□□ 0.69
CNOT2-209ENST00000548159 DDX58O95786 925 aaKnown RBP19.33■□□□□ 0.68
CNOT2-209ENST00000548159 NMIQ13287 307 aaPredicted RBP19.33■□□□□ 0.68
CNOT2-209ENST00000548159 COPS6Q7L5N1 327 aa19.33■□□□□ 0.68
CNOT2-209ENST00000548159 PROSER2Q86WR7 435 aaPredicted RBP19.33■□□□□ 0.68
CNOT2-209ENST00000548159 PDRG1Q9NUG6 133 aa19.33■□□□□ 0.68
CNOT2-209ENST00000548159 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.33■□□□□ 0.68
CNOT2-209ENST00000548159 SMC3Q9UQE7 1217 aa19.33■□□□□ 0.68
CNOT2-209ENST00000548159 XAGE3Q8WTP9 111 aa19.32■□□□□ 0.68
CNOT2-209ENST00000548159 OVOS2A0A0G2JMS6 1433 aa19.32■□□□□ 0.68
CNOT2-209ENST00000548159 ST3GAL1Q11201 340 aa19.32■□□□□ 0.68
CNOT2-209ENST00000548159 ZSWIM6Q9HCJ5 1215 aa19.32■□□□□ 0.68
CNOT2-209ENST00000548159 RBM8AQ9Y5S9 174 aaKnown RBP19.32■□□□□ 0.68
CNOT2-209ENST00000548159 CCDC171Q6TFL3 1326 aa19.32■□□□□ 0.68
CNOT2-209ENST00000548159 MSNP26038 577 aaKnown RBP19.31■□□□□ 0.68
CNOT2-209ENST00000548159 NECAB1Q8N987 351 aa19.31■□□□□ 0.68
CNOT2-209ENST00000548159 RAPGEF4Q8WZA2 1011 aa19.31■□□□□ 0.68
CNOT2-209ENST00000548159 ZNF496Q96IT1 587 aaPredicted RBP19.31■□□□□ 0.68
CNOT2-209ENST00000548159 SLC52A2Q9HAB3 445 aa19.31■□□□□ 0.68
CNOT2-209ENST00000548159 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.31■□□□□ 0.68
CNOT2-209ENST00000548159 USP16Q9Y5T5 823 aa19.31■□□□□ 0.68
CNOT2-209ENST00000548159 TAF6LQ9Y6J9 622 aa19.31■□□□□ 0.68
CNOT2-209ENST00000548159 SIPA1L3O60292 1781 aaPredicted RBP19.31■□□□□ 0.68
CNOT2-209ENST00000548159 NPHP3Q7Z494 1330 aa19.31■□□□□ 0.68
CNOT2-209ENST00000548159 A0A0D9SFI3 127 aa19.31■□□□□ 0.68
CNOT2-209ENST00000548159 NEURL1BA8MQ27 555 aa19.31■□□□□ 0.68
CNOT2-209ENST00000548159 EDC3Q96F86 508 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms