RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
AC055716.3-201ENST00000547533 NBPF5PQ86XG9 351 aaPredicted RBP12.19□□□□□ -0.46
AC055716.3-201ENST00000547533 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
AC055716.3-201ENST00000547533 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
AC055716.3-201ENST00000547533 HSPA1AP0DMV8 641 aaKnown RBP12.18□□□□□ -0.46
AC055716.3-201ENST00000547533 HSPA1BP0DMV9 641 aaKnown RBP12.18□□□□□ -0.46
AC055716.3-201ENST00000547533 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
AC055716.3-201ENST00000547533 CLEC4GQ6UXB4 293 aa12.18□□□□□ -0.46
AC055716.3-201ENST00000547533 IL17REQ8NFR9 667 aa12.18□□□□□ -0.46
AC055716.3-201ENST00000547533 SLX4Q8IY92 1834 aa12.17□□□□□ -0.46
AC055716.3-201ENST00000547533 A1BGP04217 495 aa12.17□□□□□ -0.46
AC055716.3-201ENST00000547533 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
AC055716.3-201ENST00000547533 GTF2E1P29083 439 aaPredicted RBP12.17□□□□□ -0.46
AC055716.3-201ENST00000547533 CCDC93Q567U6 631 aa12.17□□□□□ -0.46
AC055716.3-201ENST00000547533 TPTE2Q6XPS3 522 aa12.17□□□□□ -0.46
AC055716.3-201ENST00000547533 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
AC055716.3-201ENST00000547533 COL3A1P02461 1466 aaPredicted RBP12.16□□□□□ -0.46
AC055716.3-201ENST00000547533 CAMTA2O94983 1202 aa12.16□□□□□ -0.46
AC055716.3-201ENST00000547533 SRGNP10124 158 aa12.16□□□□□ -0.46
AC055716.3-201ENST00000547533 NPR1P16066 1061 aa12.16□□□□□ -0.46
AC055716.3-201ENST00000547533 PRKAR2BP31323 418 aa12.16□□□□□ -0.46
AC055716.3-201ENST00000547533 PRELPP51888 382 aa12.16□□□□□ -0.46
AC055716.3-201ENST00000547533 AIDAQ96BJ3 306 aa12.16□□□□□ -0.46
AC055716.3-201ENST00000547533 CEMIPQ8WUJ3 1361 aa12.16□□□□□ -0.46
AC055716.3-201ENST00000547533 RGL2O15211 777 aa12.15□□□□□ -0.46
AC055716.3-201ENST00000547533 ALDH1B1P30837 517 aa12.15□□□□□ -0.46
AC055716.3-201ENST00000547533 LDHDQ86WU2 507 aa12.15□□□□□ -0.46
AC055716.3-201ENST00000547533 RTKN2Q8IZC4 609 aa12.15□□□□□ -0.46
AC055716.3-201ENST00000547533 CCDC24Q8N4L8 307 aa12.15□□□□□ -0.46
AC055716.3-201ENST00000547533 DDNO94850 711 aaPredicted RBP12.14□□□□□ -0.47
AC055716.3-201ENST00000547533 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
AC055716.3-201ENST00000547533 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
AC055716.3-201ENST00000547533 NIP7Q9Y221 180 aaKnown RBP eCLIP12.14□□□□□ -0.47
AC055716.3-201ENST00000547533 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
AC055716.3-201ENST00000547533 FKBP4Q02790 459 aaKnown RBP eCLIP12.13□□□□□ -0.47
AC055716.3-201ENST00000547533 PNMA8AQ86V59 439 aaPredicted RBP12.13□□□□□ -0.47
AC055716.3-201ENST00000547533 NYXQ9GZU5 481 aa12.13□□□□□ -0.47
AC055716.3-201ENST00000547533 TMX4Q9H1E5 349 aaPredicted RBP12.13□□□□□ -0.47
AC055716.3-201ENST00000547533 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
AC055716.3-201ENST00000547533 LAMB4A4D0S4 1761 aa12.13□□□□□ -0.47
AC055716.3-201ENST00000547533 POTECB2RU33 542 aa12.12□□□□□ -0.47
AC055716.3-201ENST00000547533 JDP2Q8WYK2 163 aa12.12□□□□□ -0.47
AC055716.3-201ENST00000547533 L3MBTL3Q96JM7 780 aaPredicted RBP12.12□□□□□ -0.47
AC055716.3-201ENST00000547533 RSPH6AQ9H0K4 717 aa12.12□□□□□ -0.47
AC055716.3-201ENST00000547533 MKRN1Q9UHC7 482 aaKnown RBP12.12□□□□□ -0.47
AC055716.3-201ENST00000547533 HACL1Q9UJ83 578 aa12.12□□□□□ -0.47
AC055716.3-201ENST00000547533 USP16Q9Y5T5 823 aa12.12□□□□□ -0.47
AC055716.3-201ENST00000547533 PCNTO95613 3336 aa12.12□□□□□ -0.47
AC055716.3-201ENST00000547533 GRIPAP1Q4V328 841 aa12.11□□□□□ -0.47
AC055716.3-201ENST00000547533 EAPPQ56P03 285 aaPredicted RBP12.11□□□□□ -0.47
AC055716.3-201ENST00000547533 PNISRQ8TF01 805 aaKnown RBP12.11□□□□□ -0.47
AC055716.3-201ENST00000547533 PHACTR3Q96KR7 559 aa12.11□□□□□ -0.47
AC055716.3-201ENST00000547533 TMEM88BA6NKF7 163 aa12.1□□□□□ -0.47
AC055716.3-201ENST00000547533 FAM177BA6PVY3 158 aa12.1□□□□□ -0.47
AC055716.3-201ENST00000547533 KCNQ3O43525 872 aa12.1□□□□□ -0.47
AC055716.3-201ENST00000547533 CC2D2BQ6DHV5 1058 aa12.1□□□□□ -0.47
AC055716.3-201ENST00000547533 KIF6Q6ZMV9 814 aa12.1□□□□□ -0.47
AC055716.3-201ENST00000547533 MCM10Q7L590 875 aa12.1□□□□□ -0.47
AC055716.3-201ENST00000547533 PNNQ9H307 717 aaKnown RBP12.1□□□□□ -0.47
AC055716.3-201ENST00000547533 TAF1DQ9H5J8 278 aaPredicted RBP12.1□□□□□ -0.47
AC055716.3-201ENST00000547533 NUP98P52948 1817 aa12.09□□□□□ -0.47
AC055716.3-201ENST00000547533 CNTNAP1P78357 1384 aa12.09□□□□□ -0.47
AC055716.3-201ENST00000547533 LMOD1P29536 600 aaPredicted RBP12.09□□□□□ -0.47
AC055716.3-201ENST00000547533 IARSP41252 1262 aaKnown RBP12.09□□□□□ -0.47
AC055716.3-201ENST00000547533 PIP4K2AP48426 406 aaPredicted RBP12.09□□□□□ -0.47
AC055716.3-201ENST00000547533 CTCFP49711 727 aaPredicted RBP12.09□□□□□ -0.47
AC055716.3-201ENST00000547533 EIF6P56537 245 aaKnown RBP12.09□□□□□ -0.47
AC055716.3-201ENST00000547533 TAF7Q15545 349 aaPredicted RBP12.09□□□□□ -0.47
AC055716.3-201ENST00000547533 RPGRQ92834 1020 aaKnown RBP12.09□□□□□ -0.47
AC055716.3-201ENST00000547533 ZNF277Q9NRM2 450 aaPredicted RBP12.09□□□□□ -0.47
AC055716.3-201ENST00000547533 KLRG2A4D1S0 409 aaPredicted RBP12.08□□□□□ -0.48
AC055716.3-201ENST00000547533 EPHX2P34913 555 aa12.08□□□□□ -0.48
AC055716.3-201ENST00000547533 GPC2Q8N158 579 aa12.08□□□□□ -0.48
AC055716.3-201ENST00000547533 PASKQ96RG2 1323 aa12.08□□□□□ -0.48
AC055716.3-201ENST00000547533 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
AC055716.3-201ENST00000547533 ERVV-1B6SEH8 477 aa12.07□□□□□ -0.48
AC055716.3-201ENST00000547533 SYNE4Q8N205 404 aa12.07□□□□□ -0.48
AC055716.3-201ENST00000547533 C7orf43Q8WVR3 580 aa12.07□□□□□ -0.48
AC055716.3-201ENST00000547533 BEGAINQ9BUH8 593 aa12.07□□□□□ -0.48
AC055716.3-201ENST00000547533 PRDM10Q9NQV6 1147 aa12.07□□□□□ -0.48
AC055716.3-201ENST00000547533 PRAMEF22A3QJZ6 481 aa12.06□□□□□ -0.48
AC055716.3-201ENST00000547533 POTEIP0CG38 1075 aa12.06□□□□□ -0.48
AC055716.3-201ENST00000547533 POTEJP0CG39 1038 aa12.06□□□□□ -0.48
AC055716.3-201ENST00000547533 PPP2R1AP30153 589 aa12.06□□□□□ -0.48
AC055716.3-201ENST00000547533 RBM17Q96I25 401 aaKnown RBP12.06□□□□□ -0.48
AC055716.3-201ENST00000547533 PSMD1Q99460 953 aa12.06□□□□□ -0.48
AC055716.3-201ENST00000547533 ABT1Q9ULW3 272 aaKnown RBP12.06□□□□□ -0.48
AC055716.3-201ENST00000547533 FZD9O00144 591 aa12.05□□□□□ -0.48
AC055716.3-201ENST00000547533 MAP2K1Q02750 393 aaPredicted RBP12.05□□□□□ -0.48
AC055716.3-201ENST00000547533 DEFB115Q30KQ5 88 aa12.05□□□□□ -0.48
AC055716.3-201ENST00000547533 CNTROBQ8N137 903 aa12.05□□□□□ -0.48
AC055716.3-201ENST00000547533 NGEFQ8N5V2 710 aa12.05□□□□□ -0.48
AC055716.3-201ENST00000547533 GJA3Q9Y6H8 435 aa12.05□□□□□ -0.48
AC055716.3-201ENST00000547533 RNF123Q5XPI4 1314 aa12.05□□□□□ -0.48
AC055716.3-201ENST00000547533 ZNF541Q9H0D2 1346 aa12.05□□□□□ -0.48
AC055716.3-201ENST00000547533 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
AC055716.3-201ENST00000547533 KDM3BQ7LBC6 1761 aa12.05□□□□□ -0.48
AC055716.3-201ENST00000547533 TRPM7Q96QT4 1865 aa12.04□□□□□ -0.48
AC055716.3-201ENST00000547533 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
AC055716.3-201ENST00000547533 VEGFBP49765 207 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms