RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 ADAMTSL1Q8N6G6 1762 aa16.42■□□□□ 0.22
BRF1-207ENST00000546417 EPHX2P34913 555 aa16.42■□□□□ 0.22
BRF1-207ENST00000546417 CNBD1Q8NA66 436 aa16.42■□□□□ 0.22
BRF1-207ENST00000546417 ABT1Q9ULW3 272 aaKnown RBP16.42■□□□□ 0.22
BRF1-207ENST00000546417 SCN7AQ01118 1682 aa16.41■□□□□ 0.22
BRF1-207ENST00000546417 ST5P78524 1137 aa16.41■□□□□ 0.22
BRF1-207ENST00000546417 CCDC93Q567U6 631 aa16.41■□□□□ 0.22
BRF1-207ENST00000546417 SETDB2Q96T68 719 aa16.41■□□□□ 0.22
BRF1-207ENST00000546417 MAP1SQ66K74 1059 aaPredicted RBP16.4■□□□□ 0.22
BRF1-207ENST00000546417 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
BRF1-207ENST00000546417 TTC5Q8N0Z6 440 aa16.4■□□□□ 0.22
BRF1-207ENST00000546417 POLR3GLQ9BT43 218 aa16.4■□□□□ 0.22
BRF1-207ENST00000546417 UBR2Q8IWV8 1755 aa16.4■□□□□ 0.22
BRF1-207ENST00000546417 IL13P35225 146 aa16.39■□□□□ 0.21
BRF1-207ENST00000546417 ECE1P42892 770 aa16.39■□□□□ 0.21
BRF1-207ENST00000546417 FKBP4Q02790 459 aaKnown RBP eCLIP16.39■□□□□ 0.21
BRF1-207ENST00000546417 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.21
BRF1-207ENST00000546417 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
BRF1-207ENST00000546417 ZNF541Q9H0D2 1346 aa16.39■□□□□ 0.21
BRF1-207ENST00000546417 MORC1Q86VD1 984 aa16.38■□□□□ 0.21
BRF1-207ENST00000546417 C7orf43Q8WVR3 580 aa16.38■□□□□ 0.21
BRF1-207ENST00000546417 ZNF330Q9Y3S2 320 aaPredicted RBP16.38■□□□□ 0.21
BRF1-207ENST00000546417 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
BRF1-207ENST00000546417 CAPNS2Q96L46 248 aa16.37■□□□□ 0.21
BRF1-207ENST00000546417 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
BRF1-207ENST00000546417 ZNF277Q9NRM2 450 aaPredicted RBP16.37■□□□□ 0.21
BRF1-207ENST00000546417 RNF123Q5XPI4 1314 aa16.37■□□□□ 0.21
BRF1-207ENST00000546417 THSD7BQ9C0I4 1608 aa16.37■□□□□ 0.21
BRF1-207ENST00000546417 PAXIP1Q6ZW49 1069 aaPredicted RBP16.36■□□□□ 0.21
BRF1-207ENST00000546417 RTKN2Q8IZC4 609 aa16.36■□□□□ 0.21
BRF1-207ENST00000546417 GPC2Q8N158 579 aa16.36■□□□□ 0.21
BRF1-207ENST00000546417 GPR101Q96P66 508 aaPredicted RBP16.36■□□□□ 0.21
BRF1-207ENST00000546417 FZD9O00144 591 aa16.35■□□□□ 0.21
BRF1-207ENST00000546417 NPR1P16066 1061 aa16.35■□□□□ 0.21
BRF1-207ENST00000546417 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
BRF1-207ENST00000546417 CAMTA2O94983 1202 aa16.34■□□□□ 0.21
BRF1-207ENST00000546417 PANK3Q9H999 370 aa16.34■□□□□ 0.21
BRF1-207ENST00000546417 HEG1Q9ULI3 1381 aa16.34■□□□□ 0.21
BRF1-207ENST00000546417 MAP2K2P36507 400 aa16.33■□□□□ 0.2
BRF1-207ENST00000546417 IARSP41252 1262 aaKnown RBP16.33■□□□□ 0.2
BRF1-207ENST00000546417 GRM1Q13255 1194 aa16.33■□□□□ 0.2
BRF1-207ENST00000546417 MTHFSDQ2M296 383 aaKnown RBP16.33■□□□□ 0.2
BRF1-207ENST00000546417 CYP4F22Q6NT55 531 aa16.33■□□□□ 0.2
BRF1-207ENST00000546417 NBPF5PQ86XG9 351 aaPredicted RBP16.33■□□□□ 0.2
BRF1-207ENST00000546417 ZNF496Q96IT1 587 aaPredicted RBP16.33■□□□□ 0.2
BRF1-207ENST00000546417 TRPM7Q96QT4 1865 aa16.33■□□□□ 0.2
BRF1-207ENST00000546417 CA12O43570 354 aa16.32■□□□□ 0.2
BRF1-207ENST00000546417 HMOX1P09601 288 aa16.32■□□□□ 0.2
BRF1-207ENST00000546417 LMOD1P29536 600 aaPredicted RBP16.32■□□□□ 0.2
BRF1-207ENST00000546417 ZNF790Q6PG37 636 aa16.32■□□□□ 0.2
BRF1-207ENST00000546417 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
BRF1-207ENST00000546417 JDP2Q8WYK2 163 aa16.32■□□□□ 0.2
BRF1-207ENST00000546417 BCORQ6W2J9 1755 aa16.31■□□□□ 0.2
BRF1-207ENST00000546417 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
BRF1-207ENST00000546417 MCOLN1Q9GZU1 580 aa16.31■□□□□ 0.2
BRF1-207ENST00000546417 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
BRF1-207ENST00000546417 A1BGP04217 495 aa16.3■□□□□ 0.2
BRF1-207ENST00000546417 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
BRF1-207ENST00000546417 EIF6P56537 245 aaKnown RBP16.3■□□□□ 0.2
BRF1-207ENST00000546417 TEFQ10587 303 aa16.3■□□□□ 0.2
BRF1-207ENST00000546417 CLEC4GQ6UXB4 293 aa16.3■□□□□ 0.2
BRF1-207ENST00000546417 TSKSQ9UJT2 592 aa16.3■□□□□ 0.2
BRF1-207ENST00000546417 TNRC18O15417 2968 aaPredicted RBP16.3■□□□□ 0.2
BRF1-207ENST00000546417 PDE4DIPQ5VU43 2346 aa16.3■□□□□ 0.2
BRF1-207ENST00000546417 OLFM4Q6UX06 510 aa16.29■□□□□ 0.2
BRF1-207ENST00000546417 TPTE2Q6XPS3 522 aa16.29■□□□□ 0.2
BRF1-207ENST00000546417 FMNL2Q96PY5 1086 aa16.29■□□□□ 0.2
BRF1-207ENST00000546417 ZNF652Q9Y2D9 606 aa16.29■□□□□ 0.2
BRF1-207ENST00000546417 GJA3Q9Y6H8 435 aa16.29■□□□□ 0.2
BRF1-207ENST00000546417 TLL2Q9Y6L7 1015 aa16.29■□□□□ 0.2
BRF1-207ENST00000546417 CASP8AP2Q9UKL3 1982 aa16.29■□□□□ 0.2
BRF1-207ENST00000546417 CST9Q5W186 159 aa16.28■□□□□ 0.2
BRF1-207ENST00000546417 PSMD1Q99460 953 aa16.28■□□□□ 0.2
BRF1-207ENST00000546417 AOC2O75106 756 aa16.27■□□□□ 0.2
BRF1-207ENST00000546417 FMR1Q06787 632 aaKnown RBP eCLIP16.27■□□□□ 0.2
BRF1-207ENST00000546417 USP50Q70EL3 339 aaPredicted RBP16.27■□□□□ 0.2
BRF1-207ENST00000546417 LTBP1Q14766 1721 aa16.27■□□□□ 0.19
BRF1-207ENST00000546417 KNSTRNQ9Y448 316 aa16.26■□□□□ 0.19
BRF1-207ENST00000546417 TRAF5O00463 557 aa16.25■□□□□ 0.19
BRF1-207ENST00000546417 EPS15P42566 896 aa16.25■□□□□ 0.19
BRF1-207ENST00000546417 SCNN1DP51172 638 aa16.25■□□□□ 0.19
BRF1-207ENST00000546417 BRPF1P55201 1214 aaPredicted RBP16.25■□□□□ 0.19
BRF1-207ENST00000546417 DGKZQ13574 1117 aa16.25■□□□□ 0.19
BRF1-207ENST00000546417 CC2D2BQ6DHV5 1058 aa16.25■□□□□ 0.19
BRF1-207ENST00000546417 SIPA1L3O60292 1781 aaPredicted RBP16.25■□□□□ 0.19
BRF1-207ENST00000546417 GNAT3A8MTJ3 354 aa16.24■□□□□ 0.19
BRF1-207ENST00000546417 SAPCD2Q86UD0 394 aa16.24■□□□□ 0.19
BRF1-207ENST00000546417 IL17REQ8NFR9 667 aa16.24■□□□□ 0.19
BRF1-207ENST00000546417 HHIPL1Q96JK4 782 aa16.24■□□□□ 0.19
BRF1-207ENST00000546417 RGL2O15211 777 aa16.23■□□□□ 0.19
BRF1-207ENST00000546417 GRIPAP1Q4V328 841 aa16.23■□□□□ 0.19
BRF1-207ENST00000546417 NIP7Q9Y221 180 aaKnown RBP eCLIP16.23■□□□□ 0.19
BRF1-207ENST00000546417 SNED1Q8TER0 1413 aa16.22■□□□□ 0.19
BRF1-207ENST00000546417 DIAPH1O60610 1272 aaKnown RBP16.22■□□□□ 0.19
BRF1-207ENST00000546417 GTF2E1P29083 439 aaPredicted RBP16.22■□□□□ 0.19
BRF1-207ENST00000546417 GAS2L2Q8NHY3 880 aa16.22■□□□□ 0.19
BRF1-207ENST00000546417 FAM177BA6PVY3 158 aa16.21■□□□□ 0.19
BRF1-207ENST00000546417 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.19
BRF1-207ENST00000546417 ADARB2Q9NS39 739 aaKnown RBP16.21■□□□□ 0.19
BRF1-207ENST00000546417 TIMELESSQ9UNS1 1208 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms