RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 KRT85P78386 507 aa16.91■□□□□ 0.3
SRP54-202ENST00000546080 TYRO3Q06418 890 aa16.91■□□□□ 0.3
SRP54-202ENST00000546080 RUFY2Q8WXA3 655 aa16.91■□□□□ 0.3
SRP54-202ENST00000546080 SIRT1Q96EB6 747 aa16.91■□□□□ 0.3
SRP54-202ENST00000546080 FEZ1Q99689 392 aa16.91■□□□□ 0.3
SRP54-202ENST00000546080 MRVI1Q9Y6F6 885 aa16.91■□□□□ 0.3
SRP54-202ENST00000546080 ACEP12821 1306 aa16.91■□□□□ 0.3
SRP54-202ENST00000546080 DTNBO60941 627 aa16.91■□□□□ 0.3
SRP54-202ENST00000546080 CYP46A1Q9Y6A2 500 aa16.91■□□□□ 0.3
SRP54-202ENST00000546080 LUZP1Q86V48 1076 aa16.9■□□□□ 0.3
SRP54-202ENST00000546080 DRC7Q8IY82 874 aa16.9■□□□□ 0.3
SRP54-202ENST00000546080 CHMP3Q9Y3E7 222 aa16.9■□□□□ 0.3
SRP54-202ENST00000546080 USP31Q70CQ4 1352 aa16.9■□□□□ 0.3
SRP54-202ENST00000546080 SRGAP3O43295 1099 aa16.89■□□□□ 0.3
SRP54-202ENST00000546080 NCBP1Q09161 790 aaKnown RBP16.89■□□□□ 0.3
SRP54-202ENST00000546080 SYCP1Q15431 976 aa16.89■□□□□ 0.3
SRP54-202ENST00000546080 CAMK4Q16566 473 aa16.89■□□□□ 0.3
SRP54-202ENST00000546080 PRPF40BQ6NWY9 871 aaKnown RBP16.89■□□□□ 0.3
SRP54-202ENST00000546080 CCDC186Q7Z3E2 898 aa16.89■□□□□ 0.3
SRP54-202ENST00000546080 TTC6Q86TZ1 520 aa16.89■□□□□ 0.3
SRP54-202ENST00000546080 MAP3K5Q99683 1374 aa16.89■□□□□ 0.3
SRP54-202ENST00000546080 TECPR2O15040 1411 aa16.89■□□□□ 0.3
SRP54-202ENST00000546080 LRRC37A3O60309 1634 aa16.89■□□□□ 0.29
SRP54-202ENST00000546080 FMN2Q9NZ56 1722 aa16.89■□□□□ 0.29
SRP54-202ENST00000546080 KDRP35968 1356 aa16.89■□□□□ 0.29
SRP54-202ENST00000546080 SMTNL1A8MU46 457 aa16.89■□□□□ 0.29
SRP54-202ENST00000546080 HTATSF1O43719 755 aaKnown RBP16.89■□□□□ 0.29
SRP54-202ENST00000546080 ADCK5Q3MIX3 580 aa16.89■□□□□ 0.29
SRP54-202ENST00000546080 C16orf45Q96MC5 204 aaPredicted RBP16.89■□□□□ 0.29
SRP54-202ENST00000546080 TM6SF1Q9BZW5 370 aa16.89■□□□□ 0.29
SRP54-202ENST00000546080 ZSWIM6Q9HCJ5 1215 aa16.89■□□□□ 0.29
SRP54-202ENST00000546080 CRYBG1Q9Y4K1 1723 aa16.89■□□□□ 0.29
SRP54-202ENST00000546080 USP6P35125 1406 aa16.88■□□□□ 0.29
SRP54-202ENST00000546080 LIG1P18858 919 aa16.88■□□□□ 0.29
SRP54-202ENST00000546080 TNMDQ9H2S6 317 aa16.88■□□□□ 0.29
SRP54-202ENST00000546080 OGFRQ9NZT2 677 aa16.88■□□□□ 0.29
SRP54-202ENST00000546080 ELP1O95163 1332 aa16.88■□□□□ 0.29
SRP54-202ENST00000546080 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
SRP54-202ENST00000546080 PTH1RQ03431 593 aa16.88■□□□□ 0.29
SRP54-202ENST00000546080 ST3GAL1Q11201 340 aa16.88■□□□□ 0.29
SRP54-202ENST00000546080 ME3Q16798 604 aa16.88■□□□□ 0.29
SRP54-202ENST00000546080 LARP1BQ659C4 914 aaKnown RBP16.88■□□□□ 0.29
SRP54-202ENST00000546080 NECAB1Q8N987 351 aa16.88■□□□□ 0.29
SRP54-202ENST00000546080 CBX8Q9HC52 389 aa16.88■□□□□ 0.29
SRP54-202ENST00000546080 FLT4P35916 1363 aa16.87■□□□□ 0.29
SRP54-202ENST00000546080 TTC41PQ6P2S7 1318 aa16.87■□□□□ 0.29
SRP54-202ENST00000546080 PDIA4P13667 645 aaKnown RBP16.87■□□□□ 0.29
SRP54-202ENST00000546080 LRMPQ12912 555 aa16.87■□□□□ 0.29
SRP54-202ENST00000546080 ANO6Q4KMQ2 910 aa16.87■□□□□ 0.29
SRP54-202ENST00000546080 HSP90AB4PQ58FF6 505 aa16.87■□□□□ 0.29
SRP54-202ENST00000546080 CCDC171Q6TFL3 1326 aa16.87■□□□□ 0.29
SRP54-202ENST00000546080 USP42Q9H9J4 1324 aaKnown RBP16.87■□□□□ 0.29
SRP54-202ENST00000546080 CEP170BQ9Y4F5 1589 aaPredicted RBP16.87■□□□□ 0.29
SRP54-202ENST00000546080 GOLGA6L4A6NEF3 574 aa16.87■□□□□ 0.29
SRP54-202ENST00000546080 GNAT3A8MTJ3 354 aa16.87■□□□□ 0.29
SRP54-202ENST00000546080 TNNT1P13805 278 aa16.87■□□□□ 0.29
SRP54-202ENST00000546080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.87■□□□□ 0.29
SRP54-202ENST00000546080 CKAP2LQ8IYA6 745 aa16.87■□□□□ 0.29
SRP54-202ENST00000546080 TRIM5Q9C035 493 aa16.87■□□□□ 0.29
SRP54-202ENST00000546080 SBNO1A3KN83 1393 aa16.86■□□□□ 0.29
SRP54-202ENST00000546080 IGSF1Q8N6C5 1336 aa16.86■□□□□ 0.29
SRP54-202ENST00000546080 CACNA1FO60840 1977 aa16.86■□□□□ 0.29
SRP54-202ENST00000546080 ZKSCAN1P17029 563 aaPredicted RBP16.86■□□□□ 0.29
SRP54-202ENST00000546080 HDGFL1Q5TGJ6 251 aa16.86■□□□□ 0.29
SRP54-202ENST00000546080 CDC37L1Q7L3B6 337 aa16.86■□□□□ 0.29
SRP54-202ENST00000546080 FERMT3Q86UX7 667 aa16.86■□□□□ 0.29
SRP54-202ENST00000546080 EYA1Q99502 592 aa16.86■□□□□ 0.29
SRP54-202ENST00000546080 TOPAZ1Q8N9V7 1692 aa16.85■□□□□ 0.29
SRP54-202ENST00000546080 NUTM2FA1L443 756 aa16.85■□□□□ 0.29
SRP54-202ENST00000546080 PDCP20941 246 aa16.85■□□□□ 0.29
SRP54-202ENST00000546080 ZNF75DP51815 510 aa16.85■□□□□ 0.29
SRP54-202ENST00000546080 OS9Q13438 667 aaPredicted RBP16.85■□□□□ 0.29
SRP54-202ENST00000546080 ZSCAN25Q6NSZ9 544 aa16.85■□□□□ 0.29
SRP54-202ENST00000546080 PLA2G4DQ86XP0 818 aa16.85■□□□□ 0.29
SRP54-202ENST00000546080 PHAXQ9H814 394 aaKnown RBP16.85■□□□□ 0.29
SRP54-202ENST00000546080 DDX19AQ9NUU7 478 aaKnown RBP16.85■□□□□ 0.29
SRP54-202ENST00000546080 DACT1Q9NYF0 836 aa16.85■□□□□ 0.29
SRP54-202ENST00000546080 CGNQ9P2M7 1197 aaKnown RBP16.85■□□□□ 0.29
SRP54-202ENST00000546080 PAXBP1Q9Y5B6 917 aa16.85■□□□□ 0.29
SRP54-202ENST00000546080 TTC21AQ8NDW8 1320 aa16.85■□□□□ 0.29
SRP54-202ENST00000546080 KCNB2Q92953 911 aa16.85■□□□□ 0.29
SRP54-202ENST00000546080 NRBP1Q9UHY1 535 aa16.85■□□□□ 0.29
SRP54-202ENST00000546080 PPP6R1Q9UPN7 881 aa16.85■□□□□ 0.29
SRP54-202ENST00000546080 PLEKHG3A1L390 1219 aa16.84■□□□□ 0.29
SRP54-202ENST00000546080 CCDC112Q8NEF3 446 aa16.84■□□□□ 0.29
SRP54-202ENST00000546080 DDX54Q8TDD1 881 aaKnown RBP16.84■□□□□ 0.29
SRP54-202ENST00000546080 SCAND2PQ9GZW5 306 aaPredicted RBP16.84■□□□□ 0.29
SRP54-202ENST00000546080 TPCN1Q9ULQ1 816 aa16.84■□□□□ 0.29
SRP54-202ENST00000546080 KCNJ4P48050 445 aa16.84■□□□□ 0.29
SRP54-202ENST00000546080 AMPHP49418 695 aa16.84■□□□□ 0.29
SRP54-202ENST00000546080 FAM173BQ6P4H8 233 aa16.84■□□□□ 0.29
SRP54-202ENST00000546080 TDRD7Q8NHU6 1098 aaKnown RBP16.84■□□□□ 0.29
SRP54-202ENST00000546080 SPATA32Q96LK8 384 aa16.84■□□□□ 0.29
SRP54-202ENST00000546080 CTNNA3Q9UI47 895 aa16.84■□□□□ 0.29
SRP54-202ENST00000546080 IGSF3O75054 1194 aa16.83■□□□□ 0.28
SRP54-202ENST00000546080 NECTIN1Q15223 517 aa16.83■□□□□ 0.28
SRP54-202ENST00000546080 TAF7Q15545 349 aaPredicted RBP16.83■□□□□ 0.28
SRP54-202ENST00000546080 TPD52L1Q16890 204 aaPredicted RBP16.83■□□□□ 0.28
SRP54-202ENST00000546080 ZNF771Q7L3S4 317 aaPredicted RBP16.83■□□□□ 0.28
SRP54-202ENST00000546080 GPATCH3Q96I76 525 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms