RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 DBF4Q9UBU7 674 aaPredicted RBP28.2■■■□□ 2.11
FOXA1-202ENST00000545425 PLEKHG2Q9H7P9 1386 aa28.2■■■□□ 2.1
FOXA1-202ENST00000545425 EVA1CP58658 441 aa28.2■■■□□ 2.1
FOXA1-202ENST00000545425 GAS2L3Q86XJ1 694 aa28.2■■■□□ 2.1
FOXA1-202ENST00000545425 SEPT12Q8IYM1 358 aa28.2■■■□□ 2.1
FOXA1-202ENST00000545425 PPP1R9BQ96SB3 815 aa28.2■■■□□ 2.1
FOXA1-202ENST00000545425 SPATA31A5Q5VU36 1347 aa28.19■■■□□ 2.1
FOXA1-202ENST00000545425 SPATA31A7Q8IWB4 1347 aa28.19■■■□□ 2.1
FOXA1-202ENST00000545425 SURF6O75683 361 aaKnown RBP28.19■■■□□ 2.1
FOXA1-202ENST00000545425 CNTROBQ8N137 903 aa28.19■■■□□ 2.1
FOXA1-202ENST00000545425 AK9Q5TCS8 1911 aa28.19■■■□□ 2.1
FOXA1-202ENST00000545425 NRAPQ86VF7 1730 aa28.18■■■□□ 2.1
FOXA1-202ENST00000545425 ERC1Q8IUD2 1116 aa28.18■■■□□ 2.1
FOXA1-202ENST00000545425 NECTIN2Q92692 538 aa28.18■■■□□ 2.1
FOXA1-202ENST00000545425 HSPA4P34932 840 aa28.18■■■□□ 2.1
FOXA1-202ENST00000545425 PHAXQ9H814 394 aaKnown RBP28.18■■■□□ 2.1
FOXA1-202ENST00000545425 STRN4Q9NRL3 753 aa28.18■■■□□ 2.1
FOXA1-202ENST00000545425 ADAMTS7Q9UKP4 1686 aa28.17■■■□□ 2.1
FOXA1-202ENST00000545425 ZNF530Q6P9A1 599 aaPredicted RBP28.17■■■□□ 2.1
FOXA1-202ENST00000545425 HEG1Q9ULI3 1381 aa28.17■■■□□ 2.1
FOXA1-202ENST00000545425 BTBD11A6QL63 1104 aa28.16■■■□□ 2.1
FOXA1-202ENST00000545425 BRD1O95696 1058 aa28.16■■■□□ 2.1
FOXA1-202ENST00000545425 C1orf141Q5JVX7 400 aa28.16■■■□□ 2.1
FOXA1-202ENST00000545425 ZGPATQ8N5A5 531 aaKnown RBP28.16■■■□□ 2.1
FOXA1-202ENST00000545425 ARXQ96QS3 562 aa28.16■■■□□ 2.1
FOXA1-202ENST00000545425 SRGAP3O43295 1099 aa28.15■■■□□ 2.1
FOXA1-202ENST00000545425 NASPP49321 788 aaPredicted RBP28.15■■■□□ 2.1
FOXA1-202ENST00000545425 KLHL34Q8N239 644 aa28.15■■■□□ 2.1
FOXA1-202ENST00000545425 FAM98CQ17RN3 349 aaKnown RBP28.15■■■□□ 2.1
FOXA1-202ENST00000545425 PI4K2BQ8TCG2 481 aa28.15■■■□□ 2.1
FOXA1-202ENST00000545425 ZDHHC9Q9Y397 364 aa28.15■■■□□ 2.1
FOXA1-202ENST00000545425 RAD50Q92878 1312 aa28.14■■■□□ 2.1
FOXA1-202ENST00000545425 GLRX3O76003 335 aaKnown RBP28.14■■■□□ 2.1
FOXA1-202ENST00000545425 ARHGEF25Q86VW2 580 aa28.14■■■□□ 2.1
FOXA1-202ENST00000545425 USHBP1Q8N6Y0 703 aa28.14■■■□□ 2.1
FOXA1-202ENST00000545425 CHPF2Q9P2E5 772 aa28.14■■■□□ 2.1
FOXA1-202ENST00000545425 SPATA31A1Q5TZJ5 1347 aa28.13■■■□□ 2.09
FOXA1-202ENST00000545425 ESPNB1AK53 854 aa28.13■■■□□ 2.09
FOXA1-202ENST00000545425 RNMTO43148 476 aaKnown RBP28.13■■■□□ 2.09
FOXA1-202ENST00000545425 RUFY2Q8WXA3 655 aa28.13■■■□□ 2.09
FOXA1-202ENST00000545425 GPATCH3Q96I76 525 aa28.13■■■□□ 2.09
FOXA1-202ENST00000545425 ABCC6O95255 1503 aa28.13■■■□□ 2.09
FOXA1-202ENST00000545425 A0A0G2JS52 829 aa28.13■■■□□ 2.09
FOXA1-202ENST00000545425 SGSM2O43147 1006 aa28.13■■■□□ 2.09
FOXA1-202ENST00000545425 HS1BP3Q53T59 392 aa28.13■■■□□ 2.09
FOXA1-202ENST00000545425 ZBTB7CA1YPR0 619 aa28.12■■■□□ 2.09
FOXA1-202ENST00000545425 PI4KAP2A4QPH2 592 aa28.12■■■□□ 2.09
FOXA1-202ENST00000545425 PI4KAP1Q8N8J0 262 aa28.12■■■□□ 2.09
FOXA1-202ENST00000545425 LGR6Q9HBX8 967 aa28.12■■■□□ 2.09
FOXA1-202ENST00000545425 ADCY9O60503 1353 aa28.12■■■□□ 2.09
FOXA1-202ENST00000545425 EIF2S2P20042 333 aaKnown RBP28.11■■■□□ 2.09
FOXA1-202ENST00000545425 ZSCAN23Q3MJ62 389 aa28.11■■■□□ 2.09
FOXA1-202ENST00000545425 HYPKQ9NX55 129 aa28.11■■■□□ 2.09
FOXA1-202ENST00000545425 SIPA1L3O60292 1781 aaPredicted RBP28.11■■■□□ 2.09
FOXA1-202ENST00000545425 TSHZ3Q63HK5 1081 aa28.1■■■□□ 2.09
FOXA1-202ENST00000545425 KSR2Q6VAB6 950 aa28.1■■■□□ 2.09
FOXA1-202ENST00000545425 KIAA1211Q6ZU35 1233 aa28.09■■■□□ 2.09
FOXA1-202ENST00000545425 KRT27Q7Z3Y8 459 aa28.09■■■□□ 2.09
FOXA1-202ENST00000545425 CCDC125Q86Z20 511 aa28.09■■■□□ 2.09
FOXA1-202ENST00000545425 IL1RAPL2Q9NP60 686 aa28.09■■■□□ 2.09
FOXA1-202ENST00000545425 RGPD2P0DJD1 1756 aa28.09■■■□□ 2.09
FOXA1-202ENST00000545425 WDR33Q9C0J8 1336 aaKnown RBP28.09■■■□□ 2.09
FOXA1-202ENST00000545425 DDX58O95786 925 aaKnown RBP28.08■■■□□ 2.09
FOXA1-202ENST00000545425 PKP1Q13835 747 aa28.08■■■□□ 2.09
FOXA1-202ENST00000545425 LARP1Q6PKG0 1096 aaKnown RBP28.08■■■□□ 2.09
FOXA1-202ENST00000545425 CLASRPQ8N2M8 674 aaKnown RBP28.08■■■□□ 2.09
FOXA1-202ENST00000545425 SYAP1Q96A49 352 aaPredicted RBP28.08■■■□□ 2.09
FOXA1-202ENST00000545425 PALD1Q9ULE6 856 aa28.08■■■□□ 2.09
FOXA1-202ENST00000545425 PRPF40AO75400 957 aaKnown RBP28.08■■■□□ 2.09
FOXA1-202ENST00000545425 CAVIN1Q6NZI2 390 aaKnown RBP28.08■■■□□ 2.09
FOXA1-202ENST00000545425 UTYO14607 1347 aa28.07■■■□□ 2.08
FOXA1-202ENST00000545425 NBPF7P0C2Y1 421 aaPredicted RBP28.07■■■□□ 2.08
FOXA1-202ENST00000545425 GIGYF1O75420 1035 aaPredicted RBP28.06■■■□□ 2.08
FOXA1-202ENST00000545425 NUTM1Q86Y26 1132 aa28.06■■■□□ 2.08
FOXA1-202ENST00000545425 HIP1O00291 1037 aa28.06■■■□□ 2.08
FOXA1-202ENST00000545425 PDIA4P13667 645 aaKnown RBP28.06■■■□□ 2.08
FOXA1-202ENST00000545425 BARGINQ6ZT62 677 aa28.06■■■□□ 2.08
FOXA1-202ENST00000545425 COL5A2P05997 1499 aaPredicted RBP28.05■■■□□ 2.08
FOXA1-202ENST00000545425 THRAP3Q9Y2W1 955 aaKnown RBP28.05■■■□□ 2.08
FOXA1-202ENST00000545425 LINS1Q8NG48 757 aa28.04■■■□□ 2.08
FOXA1-202ENST00000545425 NCLP19338 710 aaKnown RBP28.04■■■□□ 2.08
FOXA1-202ENST00000545425 LSG1Q9H089 658 aaKnown RBP28.04■■■□□ 2.08
FOXA1-202ENST00000545425 PHF14O94880 888 aa28.03■■■□□ 2.08
FOXA1-202ENST00000545425 LRSAM1Q6UWE0 723 aa28.03■■■□□ 2.08
FOXA1-202ENST00000545425 ANKRD24Q8TF21 1146 aa28.03■■■□□ 2.08
FOXA1-202ENST00000545425 ECHDC1Q9NTX5 307 aa28.03■■■□□ 2.08
FOXA1-202ENST00000545425 C9orf78Q9NZ63 289 aaPredicted RBP28.03■■■□□ 2.08
FOXA1-202ENST00000545425 OS9Q13438 667 aaPredicted RBP28.02■■■□□ 2.08
FOXA1-202ENST00000545425 GPT2Q8TD30 523 aa28.02■■■□□ 2.08
FOXA1-202ENST00000545425 TM6SF1Q9BZW5 370 aa28.02■■■□□ 2.08
FOXA1-202ENST00000545425 AXIN2Q9Y2T1 843 aa28.02■■■□□ 2.08
FOXA1-202ENST00000545425 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.02■■■□□ 2.08
FOXA1-202ENST00000545425 KCNB2Q92953 911 aa28.02■■■□□ 2.08
FOXA1-202ENST00000545425 ANO8Q9HCE9 1232 aaPredicted RBP28.02■■■□□ 2.08
FOXA1-202ENST00000545425 DDX21Q9NR30 783 aaKnown RBP eCLIP28.02■■■□□ 2.08
FOXA1-202ENST00000545425 MPRIPQ6WCQ1 1025 aa28.01■■■□□ 2.07
FOXA1-202ENST00000545425 TMEM87AQ8NBN3 555 aa28■■■□□ 2.07
FOXA1-202ENST00000545425 TTC14Q96N46 770 aa28■■■□□ 2.07
FOXA1-202ENST00000545425 DIAPH3Q9NSV4 1193 aa28■■■□□ 2.07
FOXA1-202ENST00000545425 MAP3K2Q9Y2U5 619 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms