RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 CCDC15Q0P6D6 951 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 GPS2Q13227 327 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 PRPF4BQ13523 1007 aaKnown RBP6.05□□□□□ -1.44
UBE4A-203ENST00000545354 TRIM29Q14134 588 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 SEPT7Q16181 437 aaKnown RBP6.05□□□□□ -1.44
UBE4A-203ENST00000545354 TEX35Q5T0J7 233 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 ACBD5Q5T8D3 534 aaPredicted RBP6.05□□□□□ -1.44
UBE4A-203ENST00000545354 MSL1Q68DK7 614 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 CCDC70Q6NSX1 233 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 SEPT14Q6ZU15 432 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 C11orf96Q7Z7L8 435 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 TCP11Q8WWU5 503 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 C8orf37Q96NL8 207 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 IWS1Q96ST2 819 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 EXOC1Q9NV70 894 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 ITGB1BP2Q9UKP3 347 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 TRAK1Q9UPV9 953 aa6.05□□□□□ -1.44
UBE4A-203ENST00000545354 CFTRP13569 1480 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 POTEMA6NI47 508 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 XBP1P17861 261 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 ALDH1B1P30837 517 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 NASPP49321 788 aaPredicted RBP6.04□□□□□ -1.44
UBE4A-203ENST00000545354 XPCQ01831 940 aaPredicted RBP6.04□□□□□ -1.44
UBE4A-203ENST00000545354 EIF2B5Q13144 721 aaKnown RBP6.04□□□□□ -1.44
UBE4A-203ENST00000545354 E2F5Q15329 346 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 POTEGQ6S5H5 508 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 SDCCAG8Q86SQ7 713 aaPredicted RBP6.04□□□□□ -1.44
UBE4A-203ENST00000545354 STAG2Q8N3U4 1231 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 FAM76AQ8TAV0 307 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 RSRC1Q96IZ7 334 aaKnown RBP6.04□□□□□ -1.44
UBE4A-203ENST00000545354 CEP63Q96MT8 703 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 SLC24A3Q9HC58 644 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 DIAPH3Q9NSV4 1193 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 KLHL42Q9P2K6 505 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 ATP8A1Q9Y2Q0 1164 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 RSF1Q96T23 1441 aaPredicted RBP6.04□□□□□ -1.44
UBE4A-203ENST00000545354 ERBB4Q15303 1308 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 GOLGA6L19H0YKK7 550 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 KRT38O76015 456 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 SMC2O95347 1197 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 HOXB3P14651 431 aaPredicted RBP6.04□□□□□ -1.44
UBE4A-203ENST00000545354 YY1P25490 414 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 CDR1P51861 262 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 IGBP1P78318 339 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 SLC5A9Q2M3M2 681 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 ARHGEF25Q86VW2 580 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 KRT222Q8N1A0 295 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 TTC30BQ8N4P2 665 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 PPM1EQ8WY54 764 aa6.04□□□□□ -1.44
UBE4A-203ENST00000545354 A6NJR5 290 aa6.03□□□□□ -1.44
UBE4A-203ENST00000545354 DDX11L8A8MPP1 907 aa6.03□□□□□ -1.44
UBE4A-203ENST00000545354 NF2P35240 595 aa6.03□□□□□ -1.44
UBE4A-203ENST00000545354 MLECQ14165 292 aa6.03□□□□□ -1.44
UBE4A-203ENST00000545354 SMARCC1Q92922 1105 aaPredicted RBP6.03□□□□□ -1.44
UBE4A-203ENST00000545354 TSPY26PQ9H489 355 aa6.03□□□□□ -1.44
UBE4A-203ENST00000545354 PPP1R1BQ9UD71 204 aaPredicted RBP6.03□□□□□ -1.44
UBE4A-203ENST00000545354 RABL2BQ9UNT1 228 aa6.03□□□□□ -1.44
UBE4A-203ENST00000545354 IQSEC3Q9UPP2 1182 aaPredicted RBP6.03□□□□□ -1.44
UBE4A-203ENST00000545354 IFT140Q96RY7 1462 aa6.03□□□□□ -1.44
UBE4A-203ENST00000545354 hCG_2014768A0A024R1R8 64 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 F8VZ95 297 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 KIAA0754O94854 1291 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 MYBL2P10244 700 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 GJA8P48165 433 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 ZNF132P52740 706 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 DEUP1Q05D60 604 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 NOLC1Q14978 699 aaKnown RBP eCLIP6.02□□□□□ -1.45
UBE4A-203ENST00000545354 ATP2B3Q16720 1220 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 PARP10Q53GL7 1025 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 B4GALNT3Q6L9W6 998 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 CADPS2Q86UW7 1296 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 ARMC2Q8NEN0 867 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 SLX1AQ9BQ83 275 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 CDCA7Q9BWT1 371 aaPredicted RBP6.02□□□□□ -1.45
UBE4A-203ENST00000545354 POGKQ9P215 609 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 ZNF652Q9Y2D9 606 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 V9GYY5 206 aaPredicted RBP6.02□□□□□ -1.45
UBE4A-203ENST00000545354 SCAPERQ9BY12 1400 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 SGSM2O43147 1006 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 U2AF1L5P0DN76 240 aaPredicted RBP6.02□□□□□ -1.45
UBE4A-203ENST00000545354 RPS6KA3P51812 740 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 U2AF1Q01081 240 aaKnown RBP eCLIP6.02□□□□□ -1.45
UBE4A-203ENST00000545354 SYNE3Q6ZMZ3 975 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 MYLK4Q86YV6 388 aaPredicted RBP6.02□□□□□ -1.45
UBE4A-203ENST00000545354 LRRC49Q8IUZ0 686 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 RNF214Q8ND24 703 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 PHC3Q8NDX5 983 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 GIMAP7Q8NHV1 300 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 BICD1Q96G01 975 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 FAM107BQ9H098 131 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 QPCTLQ9NXS2 382 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 CLIP2Q9UDT6 1046 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 BARX2Q9UMQ3 279 aaPredicted RBP6.02□□□□□ -1.45
UBE4A-203ENST00000545354 FAN1Q9Y2M0 1017 aa6.02□□□□□ -1.45
UBE4A-203ENST00000545354 C2orf72A6NCS6 295 aa6.01□□□□□ -1.45
UBE4A-203ENST00000545354 TRIM64CA6NLI5 447 aa6.01□□□□□ -1.45
UBE4A-203ENST00000545354 PPFIA3O75145 1194 aa6.01□□□□□ -1.45
UBE4A-203ENST00000545354 MAGEA9P43362 315 aa6.01□□□□□ -1.45
UBE4A-203ENST00000545354 MNAT1P51948 309 aa6.01□□□□□ -1.45
UBE4A-203ENST00000545354 ZRSR1Q15695 479 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms