RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 LINS1Q8NG48 757 aa17.33■□□□□ 0.36
SCARB1-209ENST00000545305 CNTNAP4Q9C0A0 1308 aa17.32■□□□□ 0.36
SCARB1-209ENST00000545305 TTLL7Q6ZT98 887 aa17.32■□□□□ 0.36
SCARB1-209ENST00000545305 MEIS3Q99687 375 aa17.32■□□□□ 0.36
SCARB1-209ENST00000545305 MYD88Q99836 296 aa17.32■□□□□ 0.36
SCARB1-209ENST00000545305 METTL22Q9BUU2 404 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-209ENST00000545305 INTS5Q6P9B9 1019 aaKnown RBP17.31■□□□□ 0.36
SCARB1-209ENST00000545305 CENPQQ7L2Z9 268 aaPredicted RBP17.31■□□□□ 0.36
SCARB1-209ENST00000545305 LINC00116Q8NCU8 138 aa17.31■□□□□ 0.36
SCARB1-209ENST00000545305 ARXQ96QS3 562 aa17.31■□□□□ 0.36
SCARB1-209ENST00000545305 RWDD1Q9H446 243 aaPredicted RBP17.31■□□□□ 0.36
SCARB1-209ENST00000545305 ZBTB3Q9H5J0 574 aa17.31■□□□□ 0.36
SCARB1-209ENST00000545305 PCDHB15Q9Y5E8 787 aa17.31■□□□□ 0.36
SCARB1-209ENST00000545305 UBTFL1P0CB47 393 aaPredicted RBP17.3■□□□□ 0.36
SCARB1-209ENST00000545305 HMGB2P26583 209 aaKnown RBP17.3■□□□□ 0.36
SCARB1-209ENST00000545305 C1orf115Q9H7X2 142 aa17.3■□□□□ 0.36
SCARB1-209ENST00000545305 IBTKQ9P2D0 1353 aaPredicted RBP17.29■□□□□ 0.36
SCARB1-209ENST00000545305 MAP3K15Q6ZN16 1313 aa17.29■□□□□ 0.36
SCARB1-209ENST00000545305 GNAI2P04899 355 aa17.29■□□□□ 0.36
SCARB1-209ENST00000545305 HDAC5Q9UQL6 1122 aa17.29■□□□□ 0.36
SCARB1-209ENST00000545305 AFDNP55196 1824 aaKnown RBP17.28■□□□□ 0.36
SCARB1-209ENST00000545305 TAF1LQ8IZX4 1826 aa17.28■□□□□ 0.36
SCARB1-209ENST00000545305 A0A087WZG4 1122 aa17.28■□□□□ 0.36
SCARB1-209ENST00000545305 EIF5P55010 431 aaKnown RBP17.28■□□□□ 0.36
SCARB1-209ENST00000545305 CWF19L2Q2TBE0 894 aaKnown RBP17.28■□□□□ 0.36
SCARB1-209ENST00000545305 SLC27A3Q5K4L6 730 aa17.28■□□□□ 0.36
SCARB1-209ENST00000545305 RC3H1Q5TC82 1133 aaKnown RBP17.28■□□□□ 0.36
SCARB1-209ENST00000545305 DZIP3Q86Y13 1208 aaKnown RBP17.28■□□□□ 0.36
SCARB1-209ENST00000545305 C9orf78Q9NZ63 289 aaPredicted RBP17.28■□□□□ 0.36
SCARB1-209ENST00000545305 COL15A1P39059 1388 aa17.28■□□□□ 0.36
SCARB1-209ENST00000545305 KDM2BQ8NHM5 1336 aa17.27■□□□□ 0.36
SCARB1-209ENST00000545305 NEURL1BA8MQ27 555 aa17.27■□□□□ 0.36
SCARB1-209ENST00000545305 KCNQ4P56696 695 aa17.27■□□□□ 0.36
SCARB1-209ENST00000545305 HDAC1Q13547 482 aaPredicted RBP17.27■□□□□ 0.36
SCARB1-209ENST00000545305 HSP90AB3PQ58FF7 597 aa17.27■□□□□ 0.36
SCARB1-209ENST00000545305 PELP1Q8IZL8 1130 aaKnown RBP17.27■□□□□ 0.36
SCARB1-209ENST00000545305 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
SCARB1-209ENST00000545305 MYH14Q7Z406 1995 aaKnown RBP17.27■□□□□ 0.36
SCARB1-209ENST00000545305 IGKV5-2P06315 115 aa17.26■□□□□ 0.35
SCARB1-209ENST00000545305 C4BP0C0L5 1744 aa17.26■□□□□ 0.35
SCARB1-209ENST00000545305 TNS1Q9HBL0 1735 aaKnown RBP17.26■□□□□ 0.35
SCARB1-209ENST00000545305 ERVV-1B6SEH8 477 aa17.25■□□□□ 0.35
SCARB1-209ENST00000545305 GRM8O00222 908 aa17.25■□□□□ 0.35
SCARB1-209ENST00000545305 APBA3O96018 575 aa17.25■□□□□ 0.35
SCARB1-209ENST00000545305 GCKRQ14397 625 aa17.25■□□□□ 0.35
SCARB1-209ENST00000545305 GIGYF2Q6Y7W6 1299 aaKnown RBP17.25■□□□□ 0.35
SCARB1-209ENST00000545305 RPAP2Q8IXW5 612 aaPredicted RBP17.25■□□□□ 0.35
SCARB1-209ENST00000545305 AK7Q96M32 723 aa17.25■□□□□ 0.35
SCARB1-209ENST00000545305 ATP5J2-PTCD1G3V325 749 aa17.24■□□□□ 0.35
SCARB1-209ENST00000545305 PLSCR1O15162 318 aa17.24■□□□□ 0.35
SCARB1-209ENST00000545305 GNPATO15228 680 aa17.24■□□□□ 0.35
SCARB1-209ENST00000545305 HMMRO75330 724 aa17.24■□□□□ 0.35
SCARB1-209ENST00000545305 RPS6KA4O75676 772 aa17.24■□□□□ 0.35
SCARB1-209ENST00000545305 IGHDP01880 384 aa17.24■□□□□ 0.35
SCARB1-209ENST00000545305 TCIRG1Q13488 830 aa17.24■□□□□ 0.35
SCARB1-209ENST00000545305 ANKRD44Q8N8A2 993 aa17.24■□□□□ 0.35
SCARB1-209ENST00000545305 CWC25Q9NXE8 425 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-209ENST00000545305 TBC1D2BQ9UPU7 963 aa17.24■□□□□ 0.35
SCARB1-209ENST00000545305 LRRFIP2Q9Y608 721 aaKnown RBP17.24■□□□□ 0.35
SCARB1-209ENST00000545305 ANKRD36CQ5JPF3 1778 aa17.24■□□□□ 0.35
SCARB1-209ENST00000545305 RGPD3A6NKT7 1758 aaPredicted RBP17.23■□□□□ 0.35
SCARB1-209ENST00000545305 RGPD4Q7Z3J3 1758 aa17.23■□□□□ 0.35
SCARB1-209ENST00000545305 CEP85Q6P2H3 762 aa17.23■□□□□ 0.35
SCARB1-209ENST00000545305 CCDC191Q8NCU4 936 aa17.23■□□□□ 0.35
SCARB1-209ENST00000545305 RTCBQ9Y3I0 505 aaKnown RBP17.23■□□□□ 0.35
SCARB1-209ENST00000545305 BCORQ6W2J9 1755 aa17.23■□□□□ 0.35
SCARB1-209ENST00000545305 UTYO14607 1347 aa17.22■□□□□ 0.35
SCARB1-209ENST00000545305 NBPF7P0C2Y1 421 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-209ENST00000545305 TXNRD1Q16881 649 aa17.22■□□□□ 0.35
SCARB1-209ENST00000545305 ISCA1Q9BUE6 129 aa17.22■□□□□ 0.35
SCARB1-209ENST00000545305 ZNF652Q9Y2D9 606 aa17.22■□□□□ 0.35
SCARB1-209ENST00000545305 SCN7AQ01118 1682 aa17.21■□□□□ 0.35
SCARB1-209ENST00000545305 LRRC4BQ9NT99 713 aa17.21■□□□□ 0.35
SCARB1-209ENST00000545305 NUP98P52948 1817 aa17.21■□□□□ 0.35
SCARB1-209ENST00000545305 CAMTA2O94983 1202 aa17.2■□□□□ 0.34
SCARB1-209ENST00000545305 TRIM28Q13263 835 aaKnown RBP17.2■□□□□ 0.34
SCARB1-209ENST00000545305 HLFQ16534 295 aa17.2■□□□□ 0.34
SCARB1-209ENST00000545305 ILDR2Q71H61 639 aa17.2■□□□□ 0.34
SCARB1-209ENST00000545305 RGL2O15211 777 aa17.19■□□□□ 0.34
SCARB1-209ENST00000545305 SF3B2Q13435 895 aaKnown RBP17.19■□□□□ 0.34
SCARB1-209ENST00000545305 SIRT2Q8IXJ6 389 aa17.19■□□□□ 0.34
SCARB1-209ENST00000545305 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
SCARB1-209ENST00000545305 ADRA2BP18089 450 aa17.18■□□□□ 0.34
SCARB1-209ENST00000545305 GPTP24298 496 aa17.18■□□□□ 0.34
SCARB1-209ENST00000545305 ATP8B2P98198 1209 aa17.18■□□□□ 0.34
SCARB1-209ENST00000545305 UBE3BQ7Z3V4 1068 aa17.18■□□□□ 0.34
SCARB1-209ENST00000545305 ZPR1O75312 459 aa17.17■□□□□ 0.34
SCARB1-209ENST00000545305 CLEC4GQ6UXB4 293 aa17.17■□□□□ 0.34
SCARB1-209ENST00000545305 SUCLG2Q96I99 432 aa17.17■□□□□ 0.34
SCARB1-209ENST00000545305 NARFQ9UHQ1 456 aa17.17■□□□□ 0.34
SCARB1-209ENST00000545305 UBR3Q6ZT12 1888 aa17.16■□□□□ 0.34
SCARB1-209ENST00000545305 H7C1W4 665 aa17.16■□□□□ 0.34
SCARB1-209ENST00000545305 PHF14O94880 888 aa17.16■□□□□ 0.34
SCARB1-209ENST00000545305 RFC4P35249 363 aa17.16■□□□□ 0.34
SCARB1-209ENST00000545305 PARP10Q53GL7 1025 aa17.16■□□□□ 0.34
SCARB1-209ENST00000545305 TRAPPC3LQ5T215 181 aa17.16■□□□□ 0.34
SCARB1-209ENST00000545305 NLRP10Q86W26 655 aa17.16■□□□□ 0.34
SCARB1-209ENST00000545305 SMC5Q8IY18 1101 aa17.16■□□□□ 0.34
SCARB1-209ENST00000545305 C4AP0C0L4 1744 aa17.16■□□□□ 0.34
SCARB1-209ENST00000545305 SOCS7O14512 581 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms