RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 IQSEC3Q9UPP2 1182 aaPredicted RBP14.9□□□□□ -0.02
CHD4-211ENST00000544484 CHMP4BP1P59074 171 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 KIAA1328Q86T90 577 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 TEX13AQ9BXU3 409 aaPredicted RBP14.9□□□□□ -0.02
CHD4-211ENST00000544484 UBA5Q9GZZ9 404 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 CENPHQ9H3R5 247 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 ARHGAP29Q52LW3 1261 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 VAT1LQ9HCJ6 419 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 SDSP20132 328 aa14.89□□□□□ -0.03
CHD4-211ENST00000544484 BIN1O00499 593 aa14.89□□□□□ -0.03
CHD4-211ENST00000544484 NEFHP12036 1026 aa14.89□□□□□ -0.03
CHD4-211ENST00000544484 TMEM67Q5HYA8 995 aa14.89□□□□□ -0.03
CHD4-211ENST00000544484 CDC5LQ99459 802 aaKnown RBP14.89□□□□□ -0.03
CHD4-211ENST00000544484 ANO10Q9NW15 660 aa14.89□□□□□ -0.03
CHD4-211ENST00000544484 TRMT1LQ7Z2T5 733 aaKnown RBP14.89□□□□□ -0.03
CHD4-211ENST00000544484 NEK1Q96PY6 1258 aa14.89□□□□□ -0.03
CHD4-211ENST00000544484 KRT24Q2M2I5 525 aa14.89□□□□□ -0.03
CHD4-211ENST00000544484 FSIP1Q8NA03 581 aa14.89□□□□□ -0.03
CHD4-211ENST00000544484 POLKQ9UBT6 870 aa14.89□□□□□ -0.03
CHD4-211ENST00000544484 FAM193AP78312 1265 aa14.89□□□□□ -0.03
CHD4-211ENST00000544484 CATIPQ7Z7H3 387 aa14.89□□□□□ -0.03
CHD4-211ENST00000544484 LRRC2Q9BYS8 371 aa14.89□□□□□ -0.03
CHD4-211ENST00000544484 CCDC194A0A1B0GVG4 234 aa14.88□□□□□ -0.03
CHD4-211ENST00000544484 STX6O43752 255 aa14.88□□□□□ -0.03
CHD4-211ENST00000544484 ZCRB1Q8TBF4 217 aaKnown RBP14.88□□□□□ -0.03
CHD4-211ENST00000544484 C16orf71Q8IYS4 520 aaPredicted RBP14.88□□□□□ -0.03
CHD4-211ENST00000544484 PLCH2O75038 1416 aa14.88□□□□□ -0.03
CHD4-211ENST00000544484 ERLIN2O94905 339 aa14.88□□□□□ -0.03
CHD4-211ENST00000544484 SFPQP23246 707 aaKnown RBP eCLIP14.88□□□□□ -0.03
CHD4-211ENST00000544484 NUCB1Q02818 461 aa14.88□□□□□ -0.03
CHD4-211ENST00000544484 USP25Q9UHP3 1055 aa14.88□□□□□ -0.03
CHD4-211ENST00000544484 NECAB1Q8N987 351 aa14.88□□□□□ -0.03
CHD4-211ENST00000544484 CNNM3Q8NE01 707 aa14.88□□□□□ -0.03
CHD4-211ENST00000544484 ORC3Q9UBD5 711 aaPredicted RBP14.88□□□□□ -0.03
CHD4-211ENST00000544484 ASXL2Q76L83 1435 aa14.87□□□□□ -0.03
CHD4-211ENST00000544484 ENOX2Q16206 610 aaKnown RBP14.87□□□□□ -0.03
CHD4-211ENST00000544484 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
CHD4-211ENST00000544484 TSPY2A6NKD2 308 aa14.87□□□□□ -0.03
CHD4-211ENST00000544484 IARSP41252 1262 aaKnown RBP14.87□□□□□ -0.03
CHD4-211ENST00000544484 MTHFSDQ2M296 383 aaKnown RBP14.87□□□□□ -0.03
CHD4-211ENST00000544484 NCKAP5LQ9HCH0 1330 aa14.87□□□□□ -0.03
CHD4-211ENST00000544484 ISM2Q6H9L7 571 aa14.87□□□□□ -0.03
CHD4-211ENST00000544484 TTF1Q15361 905 aaPredicted RBP14.87□□□□□ -0.03
CHD4-211ENST00000544484 TBC1D32Q96NH3 1257 aa14.87□□□□□ -0.03
CHD4-211ENST00000544484 TSPYL1Q9H0U9 437 aa14.87□□□□□ -0.03
CHD4-211ENST00000544484 LMBR1LQ6UX01 489 aa14.87□□□□□ -0.03
CHD4-211ENST00000544484 TSPYL6Q8N831 410 aa14.87□□□□□ -0.03
CHD4-211ENST00000544484 RFC4P35249 363 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 SSR1P43307 286 aaKnown RBP14.86□□□□□ -0.03
CHD4-211ENST00000544484 CPLX3Q8WVH0 158 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 PA2G4Q9UQ80 394 aaKnown RBP14.86□□□□□ -0.03
CHD4-211ENST00000544484 TTC21AQ8NDW8 1320 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 BIVM-ERCC5R4GMW8 1640 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 WDR78Q5VTH9 848 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 RAPGEF6Q8TEU7 1601 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 ZSCAN30Q86W11 494 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 MRPL50Q8N5N7 158 aaKnown RBP14.86□□□□□ -0.03
CHD4-211ENST00000544484 RBM27Q9P2N5 1060 aaKnown RBP14.86□□□□□ -0.03
CHD4-211ENST00000544484 ASXL1Q8IXJ9 1541 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 KAT6BQ8WYB5 2073 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 UHRF1BP1LA0JNW5 1464 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 PLEKHH1Q9ULM0 1364 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 MFSD6Q6ZSS7 791 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 TXLNBQ8N3L3 684 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 BRF1Q92994 677 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 A2MP01023 1474 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 ARHGAP45Q92619 1136 aa14.86□□□□□ -0.03
CHD4-211ENST00000544484 GOLGA6L10A6NI86 522 aa14.85□□□□□ -0.03
CHD4-211ENST00000544484 HDAC1Q13547 482 aaPredicted RBP14.85□□□□□ -0.03
CHD4-211ENST00000544484 PDE1AP54750 535 aa14.85□□□□□ -0.03
CHD4-211ENST00000544484 NBPF6Q5VWK0 638 aa14.85□□□□□ -0.03
CHD4-211ENST00000544484 NBPF5PQ86XG9 351 aaPredicted RBP14.85□□□□□ -0.03
CHD4-211ENST00000544484 NBPF4Q96M43 638 aa14.85□□□□□ -0.03
CHD4-211ENST00000544484 SLC26A6Q9BXS9 759 aa14.85□□□□□ -0.03
CHD4-211ENST00000544484 TRAPPC8Q9Y2L5 1435 aa14.85□□□□□ -0.03
CHD4-211ENST00000544484 METAP2P50579 478 aaKnown RBP eCLIP14.85□□□□□ -0.034e-8■■■□□ 14.6
CHD4-211ENST00000544484 ZNF622Q969S3 477 aaKnown RBP eCLIP14.85□□□□□ -0.033e-9■■■□□ 16.2
CHD4-211ENST00000544484 RALGAPBQ86X10 1494 aa14.85□□□□□ -0.03
CHD4-211ENST00000544484 NUP153P49790 1475 aaKnown RBP14.85□□□□□ -0.03
CHD4-211ENST00000544484 GRM8O00222 908 aa14.85□□□□□ -0.03
CHD4-211ENST00000544484 NCOA7Q8NI08 942 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 PRAG1Q86YV5 1406 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 RIMS2Q9UQ26 1411 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 CLIP2Q9UDT6 1046 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 BAG4O95429 457 aaKnown RBP14.84□□□□□ -0.03
CHD4-211ENST00000544484 TOP1P11387 765 aaKnown RBP14.84□□□□□ -0.03
CHD4-211ENST00000544484 NFATC2IPQ8NCF5 419 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 ZNF397Q8NF99 534 aaPredicted RBP14.84□□□□□ -0.03
CHD4-211ENST00000544484 MSH6P52701 1360 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 ERLIN1O75477 346 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 TNIP1Q15025 636 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 LEKR1Q6ZMV7 388 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 ANKRD44Q8N8A2 993 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 UGGT2Q9NYU1 1516 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 ATP6V1AP38606 617 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 TMX3Q96JJ7 454 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 PHACTR3Q96KR7 559 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 MAPKBP1O60336 1514 aa14.84□□□□□ -0.03
CHD4-211ENST00000544484 TAX1BP1Q86VP1 789 aa14.83□□□□□ -0.03
CHD4-211ENST00000544484 SLF2Q8IX21 1173 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms