RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 KIF13BQ9NQT8 1826 aa28.25■■■□□ 2.11
OTUB1-212ENST00000543988 MAP3K15Q6ZN16 1313 aa28.25■■■□□ 2.11
OTUB1-212ENST00000543988 ELL2O00472 640 aaPredicted RBP28.25■■■□□ 2.11
OTUB1-212ENST00000543988 HLFQ16534 295 aa28.25■■■□□ 2.11
OTUB1-212ENST00000543988 KIF6Q6ZMV9 814 aa28.25■■■□□ 2.11
OTUB1-212ENST00000543988 PELP1Q8IZL8 1130 aaKnown RBP28.25■■■□□ 2.11
OTUB1-212ENST00000543988 SETDB2Q96T68 719 aa28.24■■■□□ 2.11
OTUB1-212ENST00000543988 DDX21Q9NR30 783 aaKnown RBP eCLIP28.24■■■□□ 2.11
OTUB1-212ENST00000543988 KIAA1551Q9HCM1 1747 aa28.23■■■□□ 2.11
OTUB1-212ENST00000543988 NRXN2Q9P2S2 1712 aa28.23■■■□□ 2.11
OTUB1-212ENST00000543988 ZBTB3Q9H5J0 574 aa28.23■■■□□ 2.11
OTUB1-212ENST00000543988 FANCIQ9NVI1 1328 aa28.22■■■□□ 2.11
OTUB1-212ENST00000543988 ERVV-1B6SEH8 477 aa28.22■■■□□ 2.11
OTUB1-212ENST00000543988 TGFB2P61812 414 aa28.22■■■□□ 2.11
OTUB1-212ENST00000543988 GPR162Q16538 588 aa28.22■■■□□ 2.11
OTUB1-212ENST00000543988 WWC3Q9ULE0 1092 aa28.22■■■□□ 2.11
OTUB1-212ENST00000543988 A0A0G2JLW4 131 aa28.21■■■□□ 2.11
OTUB1-212ENST00000543988 YBX3P16989 372 aaKnown RBP eCLIP28.21■■■□□ 2.11
OTUB1-212ENST00000543988 TSPYL6Q8N831 410 aa28.21■■■□□ 2.11
OTUB1-212ENST00000543988 XAGE3Q8WTP9 111 aa28.21■■■□□ 2.11
OTUB1-212ENST00000543988 ZNF521Q96K83 1311 aa28.2■■■□□ 2.11
OTUB1-212ENST00000543988 DPEP1P16444 411 aa28.2■■■□□ 2.1
OTUB1-212ENST00000543988 SPINK5Q9NQ38 1064 aaPredicted RBP28.2■■■□□ 2.1
OTUB1-212ENST00000543988 DBF4Q9UBU7 674 aaPredicted RBP28.2■■■□□ 2.1
OTUB1-212ENST00000543988 NIP7Q9Y221 180 aaKnown RBP eCLIP28.2■■■□□ 2.1
OTUB1-212ENST00000543988 ATP10DQ9P241 1426 aa28.19■■■□□ 2.1
OTUB1-212ENST00000543988 PRR5LQ6MZQ0 368 aa28.19■■■□□ 2.1
OTUB1-212ENST00000543988 COPS6Q7L5N1 327 aa28.19■■■□□ 2.1
OTUB1-212ENST00000543988 AFDNP55196 1824 aaKnown RBP28.19■■■□□ 2.1
OTUB1-212ENST00000543988 AIMP1Q12904 312 aaKnown RBP28.17■■■□□ 2.1
OTUB1-212ENST00000543988 CCDC24Q8N4L8 307 aa28.17■■■□□ 2.1
OTUB1-212ENST00000543988 CNBD1Q8NA66 436 aa28.17■■■□□ 2.1
OTUB1-212ENST00000543988 GOLGB1Q14789 3259 aaKnown RBP28.16■■■□□ 2.1
OTUB1-212ENST00000543988 CHRNA5P30532 468 aa28.16■■■□□ 2.1
OTUB1-212ENST00000543988 NBPF5PQ86XG9 351 aaPredicted RBP28.16■■■□□ 2.1
OTUB1-212ENST00000543988 N4BP2Q86UW6 1770 aaPredicted RBP28.14■■■□□ 2.1
OTUB1-212ENST00000543988 KCNA3P22001 575 aa28.14■■■□□ 2.1
OTUB1-212ENST00000543988 TWISTNBQ3B726 338 aaPredicted RBP28.14■■■□□ 2.1
OTUB1-212ENST00000543988 GIGYF2Q6Y7W6 1299 aaKnown RBP28.14■■■□□ 2.1
OTUB1-212ENST00000543988 HYPKQ9NX55 129 aa28.14■■■□□ 2.1
OTUB1-212ENST00000543988 NPHP1O15259 732 aa28.13■■■□□ 2.09
OTUB1-212ENST00000543988 GPTP24298 496 aa28.13■■■□□ 2.09
OTUB1-212ENST00000543988 UBN2Q6ZU65 1347 aa28.13■■■□□ 2.09
OTUB1-212ENST00000543988 FAM177BA6PVY3 158 aa28.12■■■□□ 2.09
OTUB1-212ENST00000543988 GOLGA2Q08379 1002 aa28.12■■■□□ 2.09
OTUB1-212ENST00000543988 CCDC30Q5VVM6 783 aa28.12■■■□□ 2.09
OTUB1-212ENST00000543988 MYH16Q9H6N6 1097 aa28.12■■■□□ 2.09
OTUB1-212ENST00000543988 ST5P78524 1137 aa28.11■■■□□ 2.09
OTUB1-212ENST00000543988 ZNF34Q8IZ26 560 aa28.11■■■□□ 2.09
OTUB1-212ENST00000543988 BRIP1Q9BX63 1249 aa28.11■■■□□ 2.09
OTUB1-212ENST00000543988 UTRNP46939 3433 aa28.11■■■□□ 2.09
OTUB1-212ENST00000543988 EXOSC9Q06265 439 aaKnown RBP28.1■■■□□ 2.09
OTUB1-212ENST00000543988 GRIN3BO60391 1043 aa28.09■■■□□ 2.09
OTUB1-212ENST00000543988 C2CD5Q86YS7 1000 aa28.09■■■□□ 2.09
OTUB1-212ENST00000543988 CHMP4AQ9BY43 222 aa28.09■■■□□ 2.09
OTUB1-212ENST00000543988 TCERG1O14776 1098 aaKnown RBP28.08■■■□□ 2.09
OTUB1-212ENST00000543988 TPTE2Q6XPS3 522 aa28.08■■■□□ 2.09
OTUB1-212ENST00000543988 PLBD2Q8NHP8 589 aa28.08■■■□□ 2.09
OTUB1-212ENST00000543988 PHAXQ9H814 394 aaKnown RBP28.08■■■□□ 2.09
OTUB1-212ENST00000543988 PIM2Q9P1W9 311 aa28.08■■■□□ 2.09
OTUB1-212ENST00000543988 BCS1LQ9Y276 419 aa28.08■■■□□ 2.09
OTUB1-212ENST00000543988 NUP98P52948 1817 aa28.08■■■□□ 2.09
OTUB1-212ENST00000543988 IBTKQ9P2D0 1353 aaPredicted RBP28.08■■■□□ 2.09
OTUB1-212ENST00000543988 ANKRD31Q8N7Z5 1873 aa28.07■■■□□ 2.08
OTUB1-212ENST00000543988 ABCC12Q96J65 1359 aa28.07■■■□□ 2.08
OTUB1-212ENST00000543988 PDE6BP35913 854 aa28.06■■■□□ 2.08
OTUB1-212ENST00000543988 SUSD4Q5VX71 490 aa28.06■■■□□ 2.08
OTUB1-212ENST00000543988 ANKRD13DQ6ZTN6 518 aa28.06■■■□□ 2.08
OTUB1-212ENST00000543988 H0YIN7 160 aa28.05■■■□□ 2.08
OTUB1-212ENST00000543988 HSP90AB3PQ58FF7 597 aa28.05■■■□□ 2.08
OTUB1-212ENST00000543988 DALRD3Q5D0E6 543 aaKnown RBP28.05■■■□□ 2.08
OTUB1-212ENST00000543988 STK31Q9BXU1 1019 aa28.05■■■□□ 2.08
OTUB1-212ENST00000543988 NYXQ9GZU5 481 aa28.05■■■□□ 2.08
OTUB1-212ENST00000543988 BRCA1P38398 1863 aaKnown RBP28.04■■■□□ 2.08
OTUB1-212ENST00000543988 NTSR2O95665 410 aa28.04■■■□□ 2.08
OTUB1-212ENST00000543988 TCIRG1Q13488 830 aa28.04■■■□□ 2.08
OTUB1-212ENST00000543988 PARP10Q53GL7 1025 aa28.04■■■□□ 2.08
OTUB1-212ENST00000543988 NUTM1Q86Y26 1132 aa28.04■■■□□ 2.08
OTUB1-212ENST00000543988 COL11A2P13942 1736 aaPredicted RBP28.04■■■□□ 2.08
OTUB1-212ENST00000543988 VAMP4O75379 141 aa28.03■■■□□ 2.08
OTUB1-212ENST00000543988 E9PSI1 815 aa28.02■■■□□ 2.08
OTUB1-212ENST00000543988 GTF2E1P29083 439 aaPredicted RBP28.02■■■□□ 2.08
OTUB1-212ENST00000543988 ERFEQ4G0M1 354 aa28.02■■■□□ 2.08
OTUB1-212ENST00000543988 NLRP10Q86W26 655 aa28.02■■■□□ 2.08
OTUB1-212ENST00000543988 PDZRN3Q9UPQ7 1066 aa28.02■■■□□ 2.08
OTUB1-212ENST00000543988 DLEC1Q9Y238 1755 aa28.01■■■□□ 2.07
OTUB1-212ENST00000543988 ANKRD36CQ5JPF3 1778 aa27.99■■■□□ 2.07
OTUB1-212ENST00000543988 KLRG2A4D1S0 409 aaPredicted RBP27.99■■■□□ 2.07
OTUB1-212ENST00000543988 SRGNP10124 158 aa27.99■■■□□ 2.07
OTUB1-212ENST00000543988 YY1P25490 414 aa27.99■■■□□ 2.07
OTUB1-212ENST00000543988 SLFN5Q08AF3 891 aa27.99■■■□□ 2.07
OTUB1-212ENST00000543988 G2E3Q7L622 706 aa27.99■■■□□ 2.07
OTUB1-212ENST00000543988 PPP1R42Q7Z4L9 355 aa27.99■■■□□ 2.07
OTUB1-212ENST00000543988 RIC3Q7Z5B4 369 aa27.99■■■□□ 2.07
OTUB1-212ENST00000543988 CDCA7LQ96GN5 454 aa27.99■■■□□ 2.07
OTUB1-212ENST00000543988 UTP14AQ9BVJ6 771 aaKnown RBP27.99■■■□□ 2.07
OTUB1-212ENST00000543988 TNRC6CQ9HCJ0 1690 aaKnown RBP27.99■■■□□ 2.07
OTUB1-212ENST00000543988 RIC1Q4ADV7 1423 aa27.99■■■□□ 2.07
OTUB1-212ENST00000543988 ATP5J2-PTCD1G3V325 749 aa27.98■■■□□ 2.07
OTUB1-212ENST00000543988 SLC4A2P04920 1241 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms