RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 TEX2Q8IWB9 1127 aa10.1□□□□□ -0.79
ABCB1-210ENST00000543898 RASEFQ8IZ41 740 aa10.1□□□□□ -0.79
ABCB1-210ENST00000543898 ZBTB9Q96C00 473 aa10.1□□□□□ -0.79
ABCB1-210ENST00000543898 SYTL4Q96C24 671 aaPredicted RBP10.1□□□□□ -0.79
ABCB1-210ENST00000543898 ZNF853P0CG23 659 aa10.09□□□□□ -0.79
ABCB1-210ENST00000543898 ZSCAN20P17040 1043 aaPredicted RBP10.09□□□□□ -0.79
ABCB1-210ENST00000543898 ANKRD1Q15327 319 aa10.09□□□□□ -0.79
ABCB1-210ENST00000543898 GTF2F1P35269 517 aaKnown RBP eCLIP10.09□□□□□ -0.79
ABCB1-210ENST00000543898 RUFY3Q7L099 469 aa10.09□□□□□ -0.79
ABCB1-210ENST00000543898 CREBRFQ8IUR6 639 aa10.09□□□□□ -0.79
ABCB1-210ENST00000543898 CLGNO14967 610 aa10.09□□□□□ -0.79
ABCB1-210ENST00000543898 MTHFSDQ2M296 383 aaKnown RBP10.09□□□□□ -0.79
ABCB1-210ENST00000543898 CEP57L1Q8IYX8 460 aa10.09□□□□□ -0.79
ABCB1-210ENST00000543898 PDILTQ8N807 584 aa10.09□□□□□ -0.79
ABCB1-210ENST00000543898 CFAP45Q9UL16 551 aa10.09□□□□□ -0.79
ABCB1-210ENST00000543898 SGSM2O43147 1006 aa10.08□□□□□ -0.8
ABCB1-210ENST00000543898 ZNF710Q8N1W2 664 aa10.08□□□□□ -0.8
ABCB1-210ENST00000543898 UBXN4Q92575 508 aa10.08□□□□□ -0.8
ABCB1-210ENST00000543898 RBM8AQ9Y5S9 174 aaKnown RBP10.08□□□□□ -0.8
ABCB1-210ENST00000543898 CDC42BPBQ9Y5S2 1711 aa10.08□□□□□ -0.8
ABCB1-210ENST00000543898 PI4KAP2A4QPH2 592 aa10.08□□□□□ -0.8
ABCB1-210ENST00000543898 PI4KAP1Q8N8J0 262 aa10.08□□□□□ -0.8
ABCB1-210ENST00000543898 LRRC2Q9BYS8 371 aa10.08□□□□□ -0.8
ABCB1-210ENST00000543898 GNAT3A8MTJ3 354 aa10.08□□□□□ -0.8
ABCB1-210ENST00000543898 BIN1O00499 593 aa10.08□□□□□ -0.8
ABCB1-210ENST00000543898 GPS2Q13227 327 aa10.08□□□□□ -0.8
ABCB1-210ENST00000543898 ECHDC1Q9NTX5 307 aa10.08□□□□□ -0.8
ABCB1-210ENST00000543898 CDC37L1Q7L3B6 337 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 USHBP1Q8N6Y0 703 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 TMX1Q9H3N1 280 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 PHAXQ9H814 394 aaKnown RBP10.07□□□□□ -0.8
ABCB1-210ENST00000543898 MTMR6Q9Y217 621 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 USP16Q9Y5T5 823 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 PTCH1Q13635 1447 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 ISM2Q6H9L7 571 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 NOL10Q9BSC4 688 aaKnown RBP10.07□□□□□ -0.8
ABCB1-210ENST00000543898 PA2G4Q9UQ80 394 aaKnown RBP10.07□□□□□ -0.8
ABCB1-210ENST00000543898 URI1O94763 535 aaPredicted RBP10.07□□□□□ -0.8
ABCB1-210ENST00000543898 ZNF75DP51815 510 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 STK38Q15208 465 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 ZSCAN25Q6NSZ9 544 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 TTC6Q86TZ1 520 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 NEUROD6Q96NK8 337 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 OSBPL3Q9H4L5 887 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 RAD50Q92878 1312 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 ZFYVE9O95405 1425 aa10.07□□□□□ -0.8
ABCB1-210ENST00000543898 CCDC69A6NI79 296 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 CPLX1O14810 134 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 LARGE1O95461 756 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 SFPQP23246 707 aaKnown RBP eCLIP10.06□□□□□ -0.8
ABCB1-210ENST00000543898 ELF2Q15723 593 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 LARP1Q6PKG0 1096 aaKnown RBP10.06□□□□□ -0.8
ABCB1-210ENST00000543898 SYNE3Q6ZMZ3 975 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 CCAR1Q8IX12 1150 aaKnown RBP10.06□□□□□ -0.8
ABCB1-210ENST00000543898 GTF3C6Q969F1 213 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 TIGD1Q96MW7 591 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 HIP1O00291 1037 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 CCT2P78371 535 aaKnown RBP10.06□□□□□ -0.8
ABCB1-210ENST00000543898 SNW1Q13573 536 aaKnown RBP10.06□□□□□ -0.8
ABCB1-210ENST00000543898 SKIDA1Q1XH10 827 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 MYOM2P54296 1465 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 SOS1Q07889 1333 aaPredicted RBP10.06□□□□□ -0.8
ABCB1-210ENST00000543898 TMCO3Q6UWJ1 677 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 ERCC4Q92889 916 aaPredicted RBP10.06□□□□□ -0.8
ABCB1-210ENST00000543898 IQGAP1P46940 1657 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 NPHP3Q7Z494 1330 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 SERPINC1P01008 464 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 ME3Q16798 604 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 ADCK5Q3MIX3 580 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 VPS53Q5VIR6 699 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 TMC6Q7Z403 805 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 RIC3Q7Z5B4 369 aa10.06□□□□□ -0.8
ABCB1-210ENST00000543898 ZNF397Q8NF99 534 aaPredicted RBP10.06□□□□□ -0.8
ABCB1-210ENST00000543898 RGS12O14924 1447 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 YTHDC2Q9H6S0 1430 aaKnown RBP10.05□□□□□ -0.8
ABCB1-210ENST00000543898 ERC1Q8IUD2 1116 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 DNAAF4Q8WXU2 420 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 ANO10Q9NW15 660 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 CALCOCO1Q9P1Z2 691 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 ZNF215Q9UL58 517 aaPredicted RBP10.05□□□□□ -0.8
ABCB1-210ENST00000543898 VIRMAQ69YN4 1812 aaKnown RBP10.05□□□□□ -0.8
ABCB1-210ENST00000543898 PTH1RQ03431 593 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 STK11IPQ8N1F8 1099 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 FSIP1Q8NA03 581 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 BRF1Q92994 677 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 ZNF396Q96N95 335 aaPredicted RBP10.05□□□□□ -0.8
ABCB1-210ENST00000543898 MAP3K4Q9Y6R4 1608 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 SLU7O95391 586 aaKnown RBP10.05□□□□□ -0.8
ABCB1-210ENST00000543898 NEXNQ0ZGT2 675 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 CREB3L3Q68CJ9 461 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 ATP7AQ04656 1500 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 NPATQ14207 1427 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 KIF24Q5T7B8 1368 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 CCDC171Q6TFL3 1326 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 STX1AQ16623 288 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 AOPEPQ8N6M6 819 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 ABCC1P33527 1531 aa10.05□□□□□ -0.8
ABCB1-210ENST00000543898 A0A087WWV3 80 aa10.04□□□□□ -0.8
ABCB1-210ENST00000543898 BMS1Q14692 1282 aaKnown RBP10.04□□□□□ -0.8
ABCB1-210ENST00000543898 EVI5LQ96CN4 794 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms