RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 CNBD1Q8NA66 436 aa15.88■□□□□ 0.13
GABPB1-206ENST00000543881 TEX13AQ9BXU3 409 aaPredicted RBP15.88■□□□□ 0.13
GABPB1-206ENST00000543881 CNTNAP1P78357 1384 aa15.88■□□□□ 0.13
GABPB1-206ENST00000543881 HEG1Q9ULI3 1381 aa15.88■□□□□ 0.13
GABPB1-206ENST00000543881 SIPA1L3O60292 1781 aaPredicted RBP15.88■□□□□ 0.13
GABPB1-206ENST00000543881 SRGNP10124 158 aa15.87■□□□□ 0.13
GABPB1-206ENST00000543881 IL6STP40189 918 aaPredicted RBP15.87■□□□□ 0.13
GABPB1-206ENST00000543881 TEFQ10587 303 aa15.87■□□□□ 0.13
GABPB1-206ENST00000543881 ZNF790Q6PG37 636 aa15.87■□□□□ 0.13
GABPB1-206ENST00000543881 CEMIPQ8WUJ3 1361 aa15.87■□□□□ 0.13
GABPB1-206ENST00000543881 SETDB2Q96T68 719 aa15.87■□□□□ 0.13
GABPB1-206ENST00000543881 PASKQ96RG2 1323 aa15.86■□□□□ 0.13
GABPB1-206ENST00000543881 IQCA1LA6NCM1 817 aa15.86■□□□□ 0.13
GABPB1-206ENST00000543881 U2AF1L5P0DN76 240 aaPredicted RBP15.86■□□□□ 0.13
GABPB1-206ENST00000543881 ST5P78524 1137 aa15.86■□□□□ 0.13
GABPB1-206ENST00000543881 U2AF1Q01081 240 aaKnown RBP eCLIP15.86■□□□□ 0.13
GABPB1-206ENST00000543881 SOGA3Q5TF21 947 aa15.86■□□□□ 0.13
GABPB1-206ENST00000543881 LDHDQ86WU2 507 aa15.86■□□□□ 0.13
GABPB1-206ENST00000543881 NUDCQ9Y266 331 aa15.86■□□□□ 0.13
GABPB1-206ENST00000543881 ARFGEF2Q9Y6D5 1785 aa15.86■□□□□ 0.13
GABPB1-206ENST00000543881 CAMTA2O94983 1202 aa15.85■□□□□ 0.13
GABPB1-206ENST00000543881 NPM2Q86SE8 214 aaKnown RBP15.85■□□□□ 0.13
GABPB1-206ENST00000543881 MASTLQ96GX5 879 aa15.85■□□□□ 0.13
GABPB1-206ENST00000543881 PRDM10Q9NQV6 1147 aa15.85■□□□□ 0.13
GABPB1-206ENST00000543881 SCN4AP35499 1836 aa15.85■□□□□ 0.13
GABPB1-206ENST00000543881 KCNQ3O43525 872 aa15.84■□□□□ 0.13
GABPB1-206ENST00000543881 A1BGP04217 495 aa15.84■□□□□ 0.13
GABPB1-206ENST00000543881 L3MBTL3Q96JM7 780 aaPredicted RBP15.84■□□□□ 0.13
GABPB1-206ENST00000543881 TAF1DQ9H5J8 278 aaPredicted RBP15.84■□□□□ 0.13
GABPB1-206ENST00000543881 AIDAQ96BJ3 306 aa15.84■□□□□ 0.13
GABPB1-206ENST00000543881 TMEM88BA6NKF7 163 aa15.83■□□□□ 0.12
GABPB1-206ENST00000543881 CTCFP49711 727 aaPredicted RBP15.83■□□□□ 0.12
GABPB1-206ENST00000543881 VEGFBP49765 207 aa15.83■□□□□ 0.12
GABPB1-206ENST00000543881 DZIP3Q86Y13 1208 aaKnown RBP15.83■□□□□ 0.12
GABPB1-206ENST00000543881 FMNL2Q96PY5 1086 aa15.83■□□□□ 0.12
GABPB1-206ENST00000543881 BCORQ6W2J9 1755 aa15.83■□□□□ 0.12
GABPB1-206ENST00000543881 ITGBL1O95965 494 aaPredicted RBP15.82■□□□□ 0.12
GABPB1-206ENST00000543881 CCDC93Q567U6 631 aa15.82■□□□□ 0.12
GABPB1-206ENST00000543881 EAPPQ56P03 285 aaPredicted RBP15.82■□□□□ 0.12
GABPB1-206ENST00000543881 MCM10Q7L590 875 aa15.82■□□□□ 0.12
GABPB1-206ENST00000543881 C7orf43Q8WVR3 580 aa15.82■□□□□ 0.12
GABPB1-206ENST00000543881 BTBD11A6QL63 1104 aa15.81■□□□□ 0.12
GABPB1-206ENST00000543881 ZNF541Q9H0D2 1346 aa15.8■□□□□ 0.12
GABPB1-206ENST00000543881 DCTN1Q14203 1278 aa15.8■□□□□ 0.12
GABPB1-206ENST00000543881 NBPF5PQ86XG9 351 aaPredicted RBP15.8■□□□□ 0.12
GABPB1-206ENST00000543881 WBP1LQ9NX94 342 aa15.8■□□□□ 0.12
GABPB1-206ENST00000543881 CLEC11AQ9Y240 323 aa15.8■□□□□ 0.12
GABPB1-206ENST00000543881 NPR1P16066 1061 aa15.79■□□□□ 0.12
GABPB1-206ENST00000543881 FKBP4Q02790 459 aaKnown RBP eCLIP15.79■□□□□ 0.12
GABPB1-206ENST00000543881 ZNF277Q9NRM2 450 aaPredicted RBP15.79■□□□□ 0.12
GABPB1-206ENST00000543881 HACL1Q9UJ83 578 aa15.79■□□□□ 0.12
GABPB1-206ENST00000543881 PRAMEF22A3QJZ6 481 aa15.78■□□□□ 0.12
GABPB1-206ENST00000543881 EPHX2P34913 555 aa15.78■□□□□ 0.12
GABPB1-206ENST00000543881 PIP4K2AP48426 406 aaPredicted RBP15.78■□□□□ 0.12
GABPB1-206ENST00000543881 LBX1P52954 281 aa15.78■□□□□ 0.12
GABPB1-206ENST00000543881 CLEC4GQ6UXB4 293 aa15.78■□□□□ 0.12
GABPB1-206ENST00000543881 USP16Q9Y5T5 823 aa15.78■□□□□ 0.12
GABPB1-206ENST00000543881 ADAMTSL1Q8N6G6 1762 aa15.78■□□□□ 0.12
GABPB1-206ENST00000543881 RTF1Q92541 710 aaKnown RBP15.78■□□□□ 0.12
GABPB1-206ENST00000543881 ZNF652Q9Y2D9 606 aa15.78■□□□□ 0.12
GABPB1-206ENST00000543881 KLRG2A4D1S0 409 aaPredicted RBP15.77■□□□□ 0.11
GABPB1-206ENST00000543881 DEFB115Q30KQ5 88 aa15.77■□□□□ 0.11
GABPB1-206ENST00000543881 OLFM4Q6UX06 510 aa15.77■□□□□ 0.11
GABPB1-206ENST00000543881 PNMA8AQ86V59 439 aaPredicted RBP15.77■□□□□ 0.11
GABPB1-206ENST00000543881 RTKN2Q8IZC4 609 aa15.77■□□□□ 0.11
GABPB1-206ENST00000543881 CNTROBQ8N137 903 aa15.77■□□□□ 0.11
GABPB1-206ENST00000543881 RNF123Q5XPI4 1314 aa15.76■□□□□ 0.11
GABPB1-206ENST00000543881 RASSF10A6NK89 507 aa15.76■□□□□ 0.11
GABPB1-206ENST00000543881 HTATSF1O43719 755 aaKnown RBP15.76■□□□□ 0.11
GABPB1-206ENST00000543881 MAP1SQ66K74 1059 aaPredicted RBP15.76■□□□□ 0.11
GABPB1-206ENST00000543881 TPTE2Q6XPS3 522 aa15.76■□□□□ 0.11
GABPB1-206ENST00000543881 PLEKHF1Q96S99 279 aa15.76■□□□□ 0.11
GABPB1-206ENST00000543881 FZD9O00144 591 aa15.75■□□□□ 0.11
GABPB1-206ENST00000543881 HSPA8P11142 646 aaKnown RBP15.74■□□□□ 0.11
GABPB1-206ENST00000543881 IARSP41252 1262 aaKnown RBP15.74■□□□□ 0.11
GABPB1-206ENST00000543881 NIP7Q9Y221 180 aaKnown RBP eCLIP15.74■□□□□ 0.11
GABPB1-206ENST00000543881 WDR33Q9C0J8 1336 aaKnown RBP15.74■□□□□ 0.11
GABPB1-206ENST00000543881 FAM177BA6PVY3 158 aa15.73■□□□□ 0.11
GABPB1-206ENST00000543881 ALDH1B1P30837 517 aa15.73■□□□□ 0.11
GABPB1-206ENST00000543881 MAP2K1Q02750 393 aaPredicted RBP15.73■□□□□ 0.11
GABPB1-206ENST00000543881 GPC2Q8N158 579 aa15.73■□□□□ 0.11
GABPB1-206ENST00000543881 SYNE4Q8N205 404 aa15.73■□□□□ 0.11
GABPB1-206ENST00000543881 ABHD8Q96I13 439 aa15.73■□□□□ 0.11
GABPB1-206ENST00000543881 MIS18AQ9NYP9 233 aa15.73■□□□□ 0.11
GABPB1-206ENST00000543881 ABT1Q9ULW3 272 aaKnown RBP15.73■□□□□ 0.11
GABPB1-206ENST00000543881 DLG5Q8TDM6 1919 aa15.73■□□□□ 0.11
GABPB1-206ENST00000543881 SNRPA1P09661 255 aaKnown RBP15.72■□□□□ 0.11
GABPB1-206ENST00000543881 TAF7Q15545 349 aaPredicted RBP15.72■□□□□ 0.11
GABPB1-206ENST00000543881 NBPF26B4DH59 902 aa15.71■□□□□ 0.11
GABPB1-206ENST00000543881 RGL2O15211 777 aa15.71■□□□□ 0.11
GABPB1-206ENST00000543881 NBPF10Q6P3W6 841 aaKnown RBP15.71■□□□□ 0.11
GABPB1-206ENST00000543881 NBPF15Q8N660 670 aa15.71■□□□□ 0.11
GABPB1-206ENST00000543881 GTF2E1P29083 439 aaPredicted RBP15.71■□□□□ 0.1
GABPB1-206ENST00000543881 NFE2L2Q16236 605 aa15.71■□□□□ 0.1
GABPB1-206ENST00000543881 FAM161AQ3B820 660 aa15.71■□□□□ 0.1
GABPB1-206ENST00000543881 JDP2Q8WYK2 163 aa15.71■□□□□ 0.1
GABPB1-206ENST00000543881 PSMD1Q99460 953 aa15.71■□□□□ 0.1
GABPB1-206ENST00000543881 THUMPD2Q9BTF0 503 aaKnown RBP15.71■□□□□ 0.1
GABPB1-206ENST00000543881 DDX21Q9NR30 783 aaKnown RBP eCLIP15.71■□□□□ 0.1
GABPB1-206ENST00000543881 SLC34A2O95436 690 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms