RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 L3MBTL3Q96JM7 780 aaPredicted RBP24.74■■□□□ 1.55
RAP1B-229ENST00000543393 TAF1DQ9H5J8 278 aaPredicted RBP24.74■■□□□ 1.55
RAP1B-229ENST00000543393 VEGFBP49765 207 aa24.73■■□□□ 1.55
RAP1B-229ENST00000543393 TEFQ10587 303 aa24.73■■□□□ 1.55
RAP1B-229ENST00000543393 NPM2Q86SE8 214 aaKnown RBP24.73■■□□□ 1.55
RAP1B-229ENST00000543393 IL17REQ8NFR9 667 aa24.73■■□□□ 1.55
RAP1B-229ENST00000543393 SIPA1L3O60292 1781 aaPredicted RBP24.72■■□□□ 1.55
RAP1B-229ENST00000543393 TMEM88BA6NKF7 163 aa24.72■■□□□ 1.55
RAP1B-229ENST00000543393 A1BGP04217 495 aa24.72■■□□□ 1.55
RAP1B-229ENST00000543393 CTCFP49711 727 aaPredicted RBP24.72■■□□□ 1.55
RAP1B-229ENST00000543393 AIDAQ96BJ3 306 aa24.72■■□□□ 1.55
RAP1B-229ENST00000543393 BCORQ6W2J9 1755 aa24.72■■□□□ 1.55
RAP1B-229ENST00000543393 CLSPNQ9HAW4 1339 aa24.71■■□□□ 1.55
RAP1B-229ENST00000543393 ITGBL1O95965 494 aaPredicted RBP24.71■■□□□ 1.55
RAP1B-229ENST00000543393 C7orf43Q8WVR3 580 aa24.7■■□□□ 1.54
RAP1B-229ENST00000543393 FMNL2Q96PY5 1086 aa24.7■■□□□ 1.54
RAP1B-229ENST00000543393 GNAT3A8MTJ3 354 aa24.69■■□□□ 1.54
RAP1B-229ENST00000543393 CCDC93Q567U6 631 aa24.69■■□□□ 1.54
RAP1B-229ENST00000543393 EAPPQ56P03 285 aaPredicted RBP24.69■■□□□ 1.54
RAP1B-229ENST00000543393 DZIP3Q86Y13 1208 aaKnown RBP24.69■■□□□ 1.54
RAP1B-229ENST00000543393 ZNF541Q9H0D2 1346 aa24.67■■□□□ 1.54
RAP1B-229ENST00000543393 LBX1P52954 281 aa24.67■■□□□ 1.54
RAP1B-229ENST00000543393 GAS2L2Q8NHY3 880 aa24.67■■□□□ 1.54
RAP1B-229ENST00000543393 WBP1LQ9NX94 342 aa24.67■■□□□ 1.54
RAP1B-229ENST00000543393 FKBP4Q02790 459 aaKnown RBP eCLIP24.66■■□□□ 1.54
RAP1B-229ENST00000543393 NBPF5PQ86XG9 351 aaPredicted RBP24.66■■□□□ 1.54
RAP1B-229ENST00000543393 HACL1Q9UJ83 578 aa24.66■■□□□ 1.54
RAP1B-229ENST00000543393 CLEC11AQ9Y240 323 aa24.66■■□□□ 1.54
RAP1B-229ENST00000543393 ADAMTSL1Q8N6G6 1762 aa24.66■■□□□ 1.54
RAP1B-229ENST00000543393 KCNQ3O43525 872 aa24.65■■□□□ 1.54
RAP1B-229ENST00000543393 ZNF277Q9NRM2 450 aaPredicted RBP24.65■■□□□ 1.54
RAP1B-229ENST00000543393 NPR1P16066 1061 aa24.64■■□□□ 1.54
RAP1B-229ENST00000543393 EPHX2P34913 555 aa24.64■■□□□ 1.54
RAP1B-229ENST00000543393 PIP4K2AP48426 406 aaPredicted RBP24.64■■□□□ 1.54
RAP1B-229ENST00000543393 CC2D1BQ5T0F9 858 aaKnown RBP24.63■■□□□ 1.53
RAP1B-229ENST00000543393 OLFM4Q6UX06 510 aa24.63■■□□□ 1.53
RAP1B-229ENST00000543393 PCGF6Q9BYE7 350 aa24.63■■□□□ 1.53
RAP1B-229ENST00000543393 U2SURPO15042 1029 aaKnown RBP24.62■■□□□ 1.53
RAP1B-229ENST00000543393 CLEC4GQ6UXB4 293 aa24.62■■□□□ 1.53
RAP1B-229ENST00000543393 USP16Q9Y5T5 823 aa24.62■■□□□ 1.53
RAP1B-229ENST00000543393 CEMIPQ8WUJ3 1361 aa24.62■■□□□ 1.53
RAP1B-229ENST00000543393 COL3A1P02461 1466 aaPredicted RBP24.62■■□□□ 1.53
RAP1B-229ENST00000543393 RNF123Q5XPI4 1314 aa24.61■■□□□ 1.53
RAP1B-229ENST00000543393 KLRG2A4D1S0 409 aaPredicted RBP24.61■■□□□ 1.53
RAP1B-229ENST00000543393 RASSF10A6NK89 507 aa24.61■■□□□ 1.53
RAP1B-229ENST00000543393 BTBD11A6QL63 1104 aa24.61■■□□□ 1.53
RAP1B-229ENST00000543393 DEFB115Q30KQ5 88 aa24.61■■□□□ 1.53
RAP1B-229ENST00000543393 MAP1SQ66K74 1059 aaPredicted RBP24.61■■□□□ 1.53
RAP1B-229ENST00000543393 CNTROBQ8N137 903 aa24.61■■□□□ 1.53
RAP1B-229ENST00000543393 PER1O15534 1290 aaPredicted RBP24.6■■□□□ 1.53
RAP1B-229ENST00000543393 HSPA8P11142 646 aaKnown RBP24.6■■□□□ 1.53
RAP1B-229ENST00000543393 PNMA8AQ86V59 439 aaPredicted RBP24.6■■□□□ 1.53
RAP1B-229ENST00000543393 RTKN2Q8IZC4 609 aa24.6■■□□□ 1.53
RAP1B-229ENST00000543393 ZNF652Q9Y2D9 606 aa24.6■■□□□ 1.53
RAP1B-229ENST00000543393 KIF7Q2M1P5 1343 aa24.6■■□□□ 1.53
RAP1B-229ENST00000543393 PRAMEF22A3QJZ6 481 aa24.59■■□□□ 1.53
RAP1B-229ENST00000543393 FZD9O00144 591 aa24.58■■□□□ 1.53
RAP1B-229ENST00000543393 IARSP41252 1262 aaKnown RBP24.58■■□□□ 1.53
RAP1B-229ENST00000543393 TPTE2Q6XPS3 522 aa24.58■■□□□ 1.53
RAP1B-229ENST00000543393 WDR33Q9C0J8 1336 aaKnown RBP24.58■■□□□ 1.52
RAP1B-229ENST00000543393 ABHD8Q96I13 439 aa24.57■■□□□ 1.52
RAP1B-229ENST00000543393 MAP2K1Q02750 393 aaPredicted RBP24.56■■□□□ 1.52
RAP1B-229ENST00000543393 GPC2Q8N158 579 aa24.56■■□□□ 1.52
RAP1B-229ENST00000543393 SYNE4Q8N205 404 aa24.56■■□□□ 1.52
RAP1B-229ENST00000543393 NIP7Q9Y221 180 aaKnown RBP eCLIP24.56■■□□□ 1.52
RAP1B-229ENST00000543393 FAM177BA6PVY3 158 aa24.55■■□□□ 1.52
RAP1B-229ENST00000543393 SLC34A2O95436 690 aa24.55■■□□□ 1.52
RAP1B-229ENST00000543393 PHACTR3Q96KR7 559 aa24.55■■□□□ 1.52
RAP1B-229ENST00000543393 ABT1Q9ULW3 272 aaKnown RBP24.55■■□□□ 1.52
RAP1B-229ENST00000543393 ALDH1B1P30837 517 aa24.54■■□□□ 1.52
RAP1B-229ENST00000543393 SNRPA1P09661 255 aaKnown RBP24.53■■□□□ 1.52
RAP1B-229ENST00000543393 FAM161AQ3B820 660 aa24.53■■□□□ 1.52
RAP1B-229ENST00000543393 JDP2Q8WYK2 163 aa24.52■■□□□ 1.52
RAP1B-229ENST00000543393 DDX21Q9NR30 783 aaKnown RBP eCLIP24.52■■□□□ 1.52
RAP1B-229ENST00000543393 SNED1Q8TER0 1413 aa24.52■■□□□ 1.52
RAP1B-229ENST00000543393 NBPF26B4DH59 902 aa24.51■■□□□ 1.51
RAP1B-229ENST00000543393 RGL2O15211 777 aa24.51■■□□□ 1.51
RAP1B-229ENST00000543393 PRKAR2BP31323 418 aa24.51■■□□□ 1.51
RAP1B-229ENST00000543393 CNGB1Q14028 1251 aaPredicted RBP24.51■■□□□ 1.51
RAP1B-229ENST00000543393 NBPF10Q6P3W6 841 aaKnown RBP24.51■■□□□ 1.51
RAP1B-229ENST00000543393 NBPF15Q8N660 670 aa24.51■■□□□ 1.51
RAP1B-229ENST00000543393 PSMD1Q99460 953 aa24.51■■□□□ 1.51
RAP1B-229ENST00000543393 GJA3Q9Y6H8 435 aa24.5■■□□□ 1.51
RAP1B-229ENST00000543393 LTBP1Q14766 1721 aa24.49■■□□□ 1.51
RAP1B-229ENST00000543393 GTF2E1P29083 439 aaPredicted RBP24.49■■□□□ 1.51
RAP1B-229ENST00000543393 HLFQ16534 295 aa24.49■■□□□ 1.51
RAP1B-229ENST00000543393 RSPH6AQ9H0K4 717 aa24.49■■□□□ 1.51
RAP1B-229ENST00000543393 COL4A5P29400 1685 aa24.49■■□□□ 1.51
RAP1B-229ENST00000543393 EIF6P56537 245 aaKnown RBP24.48■■□□□ 1.51
RAP1B-229ENST00000543393 FMR1Q06787 632 aaKnown RBP eCLIP24.48■■□□□ 1.51
RAP1B-229ENST00000543393 THSD7BQ9C0I4 1608 aa24.48■■□□□ 1.51
RAP1B-229ENST00000543393 LMOD1P29536 600 aaPredicted RBP24.47■■□□□ 1.51
RAP1B-229ENST00000543393 PAXIP1Q6ZW49 1069 aaPredicted RBP24.47■■□□□ 1.51
RAP1B-229ENST00000543393 MCM10Q7L590 875 aa24.47■■□□□ 1.51
RAP1B-229ENST00000543393 CAPNS2Q96L46 248 aa24.47■■□□□ 1.51
RAP1B-229ENST00000543393 NPC1L1Q9UHC9 1359 aa24.46■■□□□ 1.51
RAP1B-229ENST00000543393 CRY2Q49AN0 593 aa24.46■■□□□ 1.51
RAP1B-229ENST00000543393 TRPM7Q96QT4 1865 aa24.45■■□□□ 1.51
RAP1B-229ENST00000543393 ABCC12Q96J65 1359 aa24.45■■□□□ 1.5
RAP1B-229ENST00000543393 EPS15P42566 896 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms