RNA–Protein interactions for RNA: ENST00000543175.4

PTRH1-208, Transcript of peptidyl-tRNA hydrolase 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTRH1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTRH1-208ENST00000543175 NPHP1O15259 732 aa31.26■■■□□ 2.59
PTRH1-208ENST00000543175 RASSF7Q02833 373 aa31.26■■■□□ 2.59
PTRH1-208ENST00000543175 EIF4A1P60842 406 aaKnown RBP31.25■■■□□ 2.59
PTRH1-208ENST00000543175 ST5P78524 1137 aa31.25■■■□□ 2.59
PTRH1-208ENST00000543175 ZNF622Q969S3 477 aaKnown RBP eCLIP31.24■■■□□ 2.59
PTRH1-208ENST00000543175 NMRK2Q9NPI5 230 aa31.24■■■□□ 2.59
PTRH1-208ENST00000543175 SLX4Q8IY92 1834 aa31.23■■■□□ 2.59
PTRH1-208ENST00000543175 DICER1Q9UPY3 1922 aaKnown RBP31.22■■■□□ 2.59
PTRH1-208ENST00000543175 ZEB1P37275 1124 aaPredicted RBP31.22■■■□□ 2.59
PTRH1-208ENST00000543175 RIPK4P57078 832 aa31.21■■■□□ 2.59
PTRH1-208ENST00000543175 NBPF5PQ86XG9 351 aaPredicted RBP31.21■■■□□ 2.59
PTRH1-208ENST00000543175 KDM2BQ8NHM5 1336 aa31.21■■■□□ 2.59
PTRH1-208ENST00000543175 ZC3H4Q9UPT8 1303 aaKnown RBP31.21■■■□□ 2.59
PTRH1-208ENST00000543175 HSPA6P17066 643 aa31.2■■■□□ 2.59
PTRH1-208ENST00000543175 LMNB1P20700 586 aa31.2■■■□□ 2.59
PTRH1-208ENST00000543175 NIP7Q9Y221 180 aaKnown RBP eCLIP31.2■■■□□ 2.59
PTRH1-208ENST00000543175 TOMM70O94826 608 aa31.19■■■□□ 2.58
PTRH1-208ENST00000543175 NFKBIEO00221 500 aa31.18■■■□□ 2.58
PTRH1-208ENST00000543175 TMPOP42166 694 aaKnown RBP31.18■■■□□ 2.58
PTRH1-208ENST00000543175 PRELPP51888 382 aa31.18■■■□□ 2.58
PTRH1-208ENST00000543175 STYK1Q6J9G0 422 aa31.18■■■□□ 2.58
PTRH1-208ENST00000543175 SRGNP10124 158 aa31.17■■■□□ 2.58
PTRH1-208ENST00000543175 LMOD3Q0VAK6 560 aa31.17■■■□□ 2.58
PTRH1-208ENST00000543175 HLFQ16534 295 aa31.17■■■□□ 2.58
PTRH1-208ENST00000543175 TSPYL4Q9UJ04 414 aa31.17■■■□□ 2.58
PTRH1-208ENST00000543175 CNKSR1Q969H4 720 aa31.16■■■□□ 2.58
PTRH1-208ENST00000543175 C21orf2O43822 256 aa31.15■■■□□ 2.58
PTRH1-208ENST00000543175 TPTE2Q6XPS3 522 aa31.15■■■□□ 2.58
PTRH1-208ENST00000543175 NGEFQ8N5V2 710 aa31.15■■■□□ 2.58
PTRH1-208ENST00000543175 MASTLQ96GX5 879 aa31.15■■■□□ 2.58
PTRH1-208ENST00000543175 RRP7AQ9Y3A4 280 aaKnown RBP31.15■■■□□ 2.58
PTRH1-208ENST00000543175 ZNF219Q9P2Y4 722 aaPredicted RBP31.14■■■□□ 2.58
PTRH1-208ENST00000543175 ERVV-1B6SEH8 477 aa31.13■■■□□ 2.57
PTRH1-208ENST00000543175 BABAM1Q9NWV8 329 aa31.13■■■□□ 2.57
PTRH1-208ENST00000543175 ERBB4Q15303 1308 aa31.13■■■□□ 2.57
PTRH1-208ENST00000543175 MAP3K15Q6ZN16 1313 aa31.13■■■□□ 2.57
PTRH1-208ENST00000543175 MYL6BP14649 208 aa31.12■■■□□ 2.57
PTRH1-208ENST00000543175 WDR43Q15061 677 aaKnown RBP eCLIP31.12■■■□□ 2.57
PTRH1-208ENST00000543175 PRPF40BQ6NWY9 871 aaKnown RBP31.12■■■□□ 2.57
PTRH1-208ENST00000543175 KIF6Q6ZMV9 814 aa31.12■■■□□ 2.57
PTRH1-208ENST00000543175 CCDC146Q8IYE0 955 aa31.12■■■□□ 2.57
PTRH1-208ENST00000543175 FAM177BA6PVY3 158 aa31.11■■■□□ 2.57
PTRH1-208ENST00000543175 TTLL7Q6ZT98 887 aa31.11■■■□□ 2.57
PTRH1-208ENST00000543175 C16orf71Q8IYS4 520 aaPredicted RBP31.1■■■□□ 2.57
PTRH1-208ENST00000543175 LTBP3Q9NS15 1303 aa31.09■■■□□ 2.57
PTRH1-208ENST00000543175 KLRG2A4D1S0 409 aaPredicted RBP31.09■■■□□ 2.57
PTRH1-208ENST00000543175 RUNDC1Q96C34 613 aa31.09■■■□□ 2.57
PTRH1-208ENST00000543175 PRKRIP1Q9H875 184 aaPredicted RBP31.09■■■□□ 2.57
PTRH1-208ENST00000543175 RRAGCQ9HB90 399 aa31.09■■■□□ 2.57
PTRH1-208ENST00000543175 NPR1P16066 1061 aa31.08■■■□□ 2.57
PTRH1-208ENST00000543175 RBM46Q8TBY0 533 aaKnown RBP31.08■■■□□ 2.57
PTRH1-208ENST00000543175 NEUROD2Q15784 382 aa31.07■■■□□ 2.56
PTRH1-208ENST00000543175 SOGA3Q5TF21 947 aa31.07■■■□□ 2.56
PTRH1-208ENST00000543175 ANKRD36CQ5JPF3 1778 aa31.07■■■□□ 2.56
PTRH1-208ENST00000543175 GLTPD2A6NH11 291 aa31.06■■■□□ 2.56
PTRH1-208ENST00000543175 GTF2E1P29083 439 aaPredicted RBP31.06■■■□□ 2.56
PTRH1-208ENST00000543175 NYXQ9GZU5 481 aa31.06■■■□□ 2.56
PTRH1-208ENST00000543175 TAOK3Q9H2K8 898 aa31.06■■■□□ 2.56
PTRH1-208ENST00000543175 ZBTB3Q9H5J0 574 aa31.06■■■□□ 2.56
PTRH1-208ENST00000543175 WDR90Q96KV7 1748 aa31.05■■■□□ 2.56
PTRH1-208ENST00000543175 IBTKQ9P2D0 1353 aaPredicted RBP31.05■■■□□ 2.56
PTRH1-208ENST00000543175 ADAMTS8Q9UP79 889 aa31.04■■■□□ 2.56
PTRH1-208ENST00000543175 ABCC12Q96J65 1359 aa31.04■■■□□ 2.56
PTRH1-208ENST00000543175 EIF2S2P20042 333 aaKnown RBP31.03■■■□□ 2.56
PTRH1-208ENST00000543175 TRIM35Q9UPQ4 493 aa31.03■■■□□ 2.56
PTRH1-208ENST00000543175 RIC1Q4ADV7 1423 aa31.02■■■□□ 2.56
PTRH1-208ENST00000543175 PDIA6Q15084 440 aa31.02■■■□□ 2.56
PTRH1-208ENST00000543175 ERFEQ4G0M1 354 aa31.02■■■□□ 2.56
PTRH1-208ENST00000543175 LRP10Q7Z4F1 713 aa31.02■■■□□ 2.56
PTRH1-208ENST00000543175 C7orf43Q8WVR3 580 aa31.02■■■□□ 2.56
PTRH1-208ENST00000543175 UBN2Q6ZU65 1347 aa31.01■■■□□ 2.56
PTRH1-208ENST00000543175 GPTP24298 496 aa31.01■■■□□ 2.55
PTRH1-208ENST00000543175 APLP1P51693 650 aa31.01■■■□□ 2.55
PTRH1-208ENST00000543175 GIGYF2Q6Y7W6 1299 aaKnown RBP31.01■■■□□ 2.55
PTRH1-208ENST00000543175 FSTL1Q12841 308 aa31■■■□□ 2.55
PTRH1-208ENST00000543175 CCDC93Q567U6 631 aa31■■■□□ 2.55
PTRH1-208ENST00000543175 NUTM1Q86Y26 1132 aa31■■■□□ 2.55
PTRH1-208ENST00000543175 CHL1O00533 1208 aa30.99■■■□□ 2.55
PTRH1-208ENST00000543175 ZNF34Q8IZ26 560 aa30.99■■■□□ 2.55
PTRH1-208ENST00000543175 VEGFAP15692 232 aaPredicted RBP30.98■■■□□ 2.55
PTRH1-208ENST00000543175 PROSER3Q2NL68 480 aa30.98■■■□□ 2.55
PTRH1-208ENST00000543175 DPY19L2Q6NUT2 758 aa30.98■■■□□ 2.55
PTRH1-208ENST00000543175 CEP350Q5VT06 3117 aa30.97■■■□□ 2.55
PTRH1-208ENST00000543175 ANXA1P04083 346 aa30.97■■■□□ 2.55
PTRH1-208ENST00000543175 ALDH1B1P30837 517 aa30.97■■■□□ 2.55
PTRH1-208ENST00000543175 CRY2Q49AN0 593 aa30.97■■■□□ 2.55
PTRH1-208ENST00000543175 SUSD4Q5VX71 490 aa30.97■■■□□ 2.55
PTRH1-208ENST00000543175 LAS1LQ9Y4W2 734 aaKnown RBP30.96■■■□□ 2.55
PTRH1-208ENST00000543175 KRT24Q2M2I5 525 aa30.95■■■□□ 2.55
PTRH1-208ENST00000543175 NTSR2O95665 410 aa30.94■■■□□ 2.54
PTRH1-208ENST00000543175 PARP10Q53GL7 1025 aa30.94■■■□□ 2.54
PTRH1-208ENST00000543175 NECTIN2Q92692 538 aa30.94■■■□□ 2.54
PTRH1-208ENST00000543175 LAMB2P55268 1798 aa30.93■■■□□ 2.54
PTRH1-208ENST00000543175 FKBP4Q02790 459 aaKnown RBP eCLIP30.93■■■□□ 2.54
PTRH1-208ENST00000543175 SMC1BQ8NDV3 1235 aa30.93■■■□□ 2.54
PTRH1-208ENST00000543175 OLFM4Q6UX06 510 aa30.92■■■□□ 2.54
PTRH1-208ENST00000543175 PPP1R42Q7Z4L9 355 aa30.92■■■□□ 2.54
PTRH1-208ENST00000543175 RTKN2Q8IZC4 609 aa30.91■■■□□ 2.54
PTRH1-208ENST00000543175 DDX21Q9NR30 783 aaKnown RBP eCLIP30.91■■■□□ 2.54
PTRH1-208ENST00000543175 SNED1Q8TER0 1413 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms