RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 NOS2P35228 1153 aa13.62□□□□□ -0.23
MRPS35-204ENST00000542199 PHKA2P46019 1235 aa13.62□□□□□ -0.23
MRPS35-204ENST00000542199 PLA2G4AP47712 749 aa13.62□□□□□ -0.23
MRPS35-204ENST00000542199 TEAD4Q15561 434 aa13.62□□□□□ -0.23
MRPS35-204ENST00000542199 NIFKQ9BYG3 293 aaKnown RBP13.62□□□□□ -0.23
MRPS35-204ENST00000542199 ATP13A2Q9NQ11 1180 aa13.62□□□□□ -0.23
MRPS35-204ENST00000542199 ZNF232Q9UNY5 417 aa13.62□□□□□ -0.23
MRPS35-204ENST00000542199 SERTM1A2A2V5 107 aa13.61□□□□□ -0.23
MRPS35-204ENST00000542199 GTF2E1P29083 439 aaPredicted RBP13.61□□□□□ -0.23
MRPS35-204ENST00000542199 POU4F2Q12837 409 aa13.61□□□□□ -0.23
MRPS35-204ENST00000542199 ZNF211Q13398 564 aaPredicted RBP13.61□□□□□ -0.23
MRPS35-204ENST00000542199 GNASQ5JWF2 1037 aa13.61□□□□□ -0.23
MRPS35-204ENST00000542199 POTEAQ6S8J7 498 aa13.61□□□□□ -0.23
MRPS35-204ENST00000542199 STAG2Q8N3U4 1231 aa13.61□□□□□ -0.23
MRPS35-204ENST00000542199 L3MBTL2Q969R5 705 aa13.61□□□□□ -0.23
MRPS35-204ENST00000542199 RHOQP17081 205 aa13.6□□□□□ -0.23
MRPS35-204ENST00000542199 PRG4Q92954 1404 aaPredicted RBP13.6□□□□□ -0.23
MRPS35-204ENST00000542199 VTI1AQ96AJ9 217 aa13.6□□□□□ -0.23
MRPS35-204ENST00000542199 SAP130Q9H0E3 1048 aa13.6□□□□□ -0.23
MRPS35-204ENST00000542199 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
MRPS35-204ENST00000542199 SPATA31C2B4DYI2 1134 aa13.59□□□□□ -0.23
MRPS35-204ENST00000542199 PTCD1O75127 700 aaKnown RBP13.59□□□□□ -0.23
MRPS35-204ENST00000542199 ABL1P00519 1130 aa13.59□□□□□ -0.23
MRPS35-204ENST00000542199 LYSMD3Q7Z3D4 306 aa13.59□□□□□ -0.23
MRPS35-204ENST00000542199 GTF3C2Q8WUA4 911 aaPredicted RBP13.59□□□□□ -0.23
MRPS35-204ENST00000542199 COL26A1Q96A83 441 aa13.59□□□□□ -0.23
MRPS35-204ENST00000542199 NGLY1Q96IV0 654 aa13.59□□□□□ -0.23
MRPS35-204ENST00000542199 DNMT3LQ9UJW3 386 aa13.59□□□□□ -0.23
MRPS35-204ENST00000542199 CHMP3Q9Y3E7 222 aa13.59□□□□□ -0.23
MRPS35-204ENST00000542199 HCN4Q9Y3Q4 1203 aa13.59□□□□□ -0.23
MRPS35-204ENST00000542199 DNMT3AQ9Y6K1 912 aaPredicted RBP13.59□□□□□ -0.23
MRPS35-204ENST00000542199 TXLNAP40222 546 aa13.58□□□□□ -0.24
MRPS35-204ENST00000542199 MTMR3Q13615 1198 aa13.58□□□□□ -0.24
MRPS35-204ENST00000542199 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
MRPS35-204ENST00000542199 QTRT2Q9H974 415 aaKnown RBP13.58□□□□□ -0.24
MRPS35-204ENST00000542199 RUSC2Q8N2Y8 1516 aa13.58□□□□□ -0.24
MRPS35-204ENST00000542199 HIRAP54198 1017 aaPredicted RBP13.57□□□□□ -0.24
MRPS35-204ENST00000542199 SOBPA7XYQ1 873 aa13.56□□□□□ -0.24
MRPS35-204ENST00000542199 MTMR7Q9Y216 660 aa13.56□□□□□ -0.24
MRPS35-204ENST00000542199 KIAA0586Q9BVV6 1533 aa13.55□□□□□ -0.24
MRPS35-204ENST00000542199 CUL7Q14999 1698 aa13.55□□□□□ -0.24
MRPS35-204ENST00000542199 SOWAHDA6NJG2 315 aa13.54□□□□□ -0.24
MRPS35-204ENST00000542199 LCE2BO14633 110 aa13.54□□□□□ -0.24
MRPS35-204ENST00000542199 ALDH16A1Q8IZ83 802 aa13.54□□□□□ -0.24
MRPS35-204ENST00000542199 PHACTR1Q9C0D0 580 aa13.54□□□□□ -0.24
MRPS35-204ENST00000542199 CARMIL1Q5VZK9 1371 aa13.54□□□□□ -0.24
MRPS35-204ENST00000542199 COX20Q5RI15 118 aa13.53□□□□□ -0.24
MRPS35-204ENST00000542199 C16orf46Q6P387 395 aa13.53□□□□□ -0.24
MRPS35-204ENST00000542199 LRFN2Q9ULH4 789 aa13.53□□□□□ -0.24
MRPS35-204ENST00000542199 H3BRB1 525 aa13.52□□□□□ -0.25
MRPS35-204ENST00000542199 AIDAQ96BJ3 306 aa13.52□□□□□ -0.25
MRPS35-204ENST00000542199 KLRG1Q96E93 195 aa13.52□□□□□ -0.25
MRPS35-204ENST00000542199 TUT1Q9H6E5 874 aaKnown RBP13.52□□□□□ -0.25
MRPS35-204ENST00000542199 SND1Q7KZF4 910 aaKnown RBP eCLIP13.51□□□□□ -0.25
MRPS35-204ENST00000542199 HELQQ8TDG4 1101 aa13.51□□□□□ -0.25
MRPS35-204ENST00000542199 EGFL7Q9UHF1 273 aa13.51□□□□□ -0.25
MRPS35-204ENST00000542199 TNFRSF10BO14763 440 aa13.5□□□□□ -0.25
MRPS35-204ENST00000542199 MAN1A2O60476 641 aa13.5□□□□□ -0.25
MRPS35-204ENST00000542199 Q6ZNB5 142 aa13.5□□□□□ -0.25
MRPS35-204ENST00000542199 ICMTO60725 284 aa13.49□□□□□ -0.25
MRPS35-204ENST00000542199 ATP4AP20648 1035 aa13.49□□□□□ -0.25
MRPS35-204ENST00000542199 NBPF1Q3BBV0 1214 aa13.49□□□□□ -0.25
MRPS35-204ENST00000542199 MYO19Q96H55 970 aa13.49□□□□□ -0.25
MRPS35-204ENST00000542199 TIMMDC1Q9NPL8 285 aa13.49□□□□□ -0.25
MRPS35-204ENST00000542199 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.49□□□□□ -0.25
MRPS35-204ENST00000542199 GMPR2Q9P2T1 348 aaKnown RBP13.49□□□□□ -0.25
MRPS35-204ENST00000542199 FAM26DQ5JW98 314 aa13.48□□□□□ -0.25
MRPS35-204ENST00000542199 KLK14Q9P0G3 267 aa13.48□□□□□ -0.25
MRPS35-204ENST00000542199 RTN1Q16799 776 aa13.47□□□□□ -0.25
MRPS35-204ENST00000542199 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.47□□□□□ -0.25
MRPS35-204ENST00000542199 TMCO4Q5TGY1 634 aa13.47□□□□□ -0.25
MRPS35-204ENST00000542199 DGKZQ13574 1117 aa13.46□□□□□ -0.25
MRPS35-204ENST00000542199 WDR44Q5JSH3 913 aa13.46□□□□□ -0.25
MRPS35-204ENST00000542199 GLYCTKQ8IVS8 523 aa13.46□□□□□ -0.25
MRPS35-204ENST00000542199 C7orf43Q8WVR3 580 aa13.46□□□□□ -0.25
MRPS35-204ENST00000542199 ZDHHC3Q9NYG2 299 aa13.46□□□□□ -0.25
MRPS35-204ENST00000542199 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
MRPS35-204ENST00000542199 MPSTP25325 297 aa13.45□□□□□ -0.26
MRPS35-204ENST00000542199 MSX1P28360 303 aa13.45□□□□□ -0.26
MRPS35-204ENST00000542199 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.26
MRPS35-204ENST00000542199 ECM1Q16610 540 aa13.45□□□□□ -0.26
MRPS35-204ENST00000542199 C1orf53Q5VUE5 145 aa13.45□□□□□ -0.26
MRPS35-204ENST00000542199 RHPN1Q8TCX5 695 aa13.45□□□□□ -0.26
MRPS35-204ENST00000542199 GPAMQ9HCL2 828 aa13.45□□□□□ -0.26
MRPS35-204ENST00000542199 A0A1B0GTH6 734 aa13.44□□□□□ -0.26
MRPS35-204ENST00000542199 SF3B2Q13435 895 aaKnown RBP13.44□□□□□ -0.26
MRPS35-204ENST00000542199 BIN2Q9UBW5 565 aaPredicted RBP13.44□□□□□ -0.26
MRPS35-204ENST00000542199 TATP17735 454 aaPredicted RBP13.43□□□□□ -0.26
MRPS35-204ENST00000542199 TRIM47Q96LD4 638 aa13.43□□□□□ -0.26
MRPS35-204ENST00000542199 SNRPBP14678 240 aaKnown RBP13.42□□□□□ -0.26
MRPS35-204ENST00000542199 HSH2DQ96JZ2 352 aa13.42□□□□□ -0.26
MRPS35-204ENST00000542199 SENP2Q9HC62 589 aa13.42□□□□□ -0.26
MRPS35-204ENST00000542199 STIM2Q9P246 746 aa13.42□□□□□ -0.26
MRPS35-204ENST00000542199 BCS1LQ9Y276 419 aa13.42□□□□□ -0.26
MRPS35-204ENST00000542199 ADCY10Q96PN6 1610 aa13.42□□□□□ -0.26
MRPS35-204ENST00000542199 RAPGEF2Q9Y4G8 1499 aa13.42□□□□□ -0.26
MRPS35-204ENST00000542199 MAPKBP1O60336 1514 aa13.41□□□□□ -0.26
MRPS35-204ENST00000542199 PTSQ03393 145 aa13.41□□□□□ -0.26
MRPS35-204ENST00000542199 ETFBKMTQ8IXQ9 262 aa13.41□□□□□ -0.26
MRPS35-204ENST00000542199 GAS2L1Q99501 681 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms