RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 CCDC88AQ3V6T2 1871 aa31.9■■■□□ 2.7
LEMD3-203ENST00000541171 COL11A2P13942 1736 aaPredicted RBP31.89■■■□□ 2.7
LEMD3-203ENST00000541171 WDR90Q96KV7 1748 aa31.89■■■□□ 2.7
LEMD3-203ENST00000541171 TAF7Q15545 349 aaPredicted RBP31.89■■■□□ 2.7
LEMD3-203ENST00000541171 ZNF652Q9Y2D9 606 aa31.89■■■□□ 2.7
LEMD3-203ENST00000541171 NBPF26B4DH59 902 aa31.88■■■□□ 2.69
LEMD3-203ENST00000541171 SRGNP10124 158 aa31.88■■■□□ 2.69
LEMD3-203ENST00000541171 ERFEQ4G0M1 354 aa31.88■■■□□ 2.69
LEMD3-203ENST00000541171 STYK1Q6J9G0 422 aa31.88■■■□□ 2.69
LEMD3-203ENST00000541171 NBPF10Q6P3W6 841 aaKnown RBP31.88■■■□□ 2.69
LEMD3-203ENST00000541171 CLEC4GQ6UXB4 293 aa31.88■■■□□ 2.69
LEMD3-203ENST00000541171 NBPF15Q8N660 670 aa31.88■■■□□ 2.69
LEMD3-203ENST00000541171 BCORQ6W2J9 1755 aa31.87■■■□□ 2.69
LEMD3-203ENST00000541171 NEFMP07197 916 aa31.87■■■□□ 2.69
LEMD3-203ENST00000541171 DPY19L2Q6NUT2 758 aa31.87■■■□□ 2.69
LEMD3-203ENST00000541171 PRPF40BQ6NWY9 871 aaKnown RBP31.87■■■□□ 2.69
LEMD3-203ENST00000541171 MASTLQ96GX5 879 aa31.87■■■□□ 2.69
LEMD3-203ENST00000541171 TIAM2Q8IVF5 1701 aa31.86■■■□□ 2.69
LEMD3-203ENST00000541171 FAM177BA6PVY3 158 aa31.85■■■□□ 2.69
LEMD3-203ENST00000541171 KLRG1Q96E93 195 aa31.85■■■□□ 2.69
LEMD3-203ENST00000541171 TAOK3Q9H2K8 898 aa31.85■■■□□ 2.69
LEMD3-203ENST00000541171 NIP7Q9Y221 180 aaKnown RBP eCLIP31.85■■■□□ 2.69
LEMD3-203ENST00000541171 SLX4Q8IY92 1834 aa31.82■■■□□ 2.68
LEMD3-203ENST00000541171 POTECB2RU33 542 aa31.81■■■□□ 2.68
LEMD3-203ENST00000541171 TPTE2Q6XPS3 522 aa31.81■■■□□ 2.68
LEMD3-203ENST00000541171 NGEFQ8N5V2 710 aa31.81■■■□□ 2.68
LEMD3-203ENST00000541171 LTBP3Q9NS15 1303 aa31.8■■■□□ 2.68
LEMD3-203ENST00000541171 HLFQ16534 295 aa31.8■■■□□ 2.68
LEMD3-203ENST00000541171 FER1L6Q2WGJ9 1857 aa31.8■■■□□ 2.68
LEMD3-203ENST00000541171 SOGA3Q5TF21 947 aa31.79■■■□□ 2.68
LEMD3-203ENST00000541171 NPR1P16066 1061 aa31.78■■■□□ 2.68
LEMD3-203ENST00000541171 PNISRQ8TF01 805 aaKnown RBP31.78■■■□□ 2.68
LEMD3-203ENST00000541171 THUMPD2Q9BTF0 503 aaKnown RBP31.78■■■□□ 2.68
LEMD3-203ENST00000541171 CACNA1SQ13698 1873 aa31.78■■■□□ 2.68
LEMD3-203ENST00000541171 GTF2E1P29083 439 aaPredicted RBP31.76■■■□□ 2.67
LEMD3-203ENST00000541171 PLEKHF1Q96S99 279 aa31.76■■■□□ 2.67
LEMD3-203ENST00000541171 DDNO94850 711 aaPredicted RBP31.75■■■□□ 2.67
LEMD3-203ENST00000541171 NFE2L2Q16236 605 aa31.75■■■□□ 2.67
LEMD3-203ENST00000541171 RRP7AQ9Y3A4 280 aaKnown RBP31.75■■■□□ 2.67
LEMD3-203ENST00000541171 RGL2O15211 777 aa31.74■■■□□ 2.67
LEMD3-203ENST00000541171 CCDC93Q567U6 631 aa31.74■■■□□ 2.67
LEMD3-203ENST00000541171 JMYQ8N9B5 988 aa31.74■■■□□ 2.67
LEMD3-203ENST00000541171 C7orf43Q8WVR3 580 aa31.74■■■□□ 2.67
LEMD3-203ENST00000541171 DICER1Q9UPY3 1922 aaKnown RBP31.73■■■□□ 2.67
LEMD3-203ENST00000541171 KLRG2A4D1S0 409 aaPredicted RBP31.72■■■□□ 2.67
LEMD3-203ENST00000541171 EIF4A1P60842 406 aaKnown RBP31.72■■■□□ 2.67
LEMD3-203ENST00000541171 MAPK8IP3Q9UPT6 1336 aa31.72■■■□□ 2.67
LEMD3-203ENST00000541171 MYL6BP14649 208 aa31.71■■■□□ 2.67
LEMD3-203ENST00000541171 OLFM4Q6UX06 510 aa31.71■■■□□ 2.67
LEMD3-203ENST00000541171 DLG5Q8TDM6 1919 aa31.71■■■□□ 2.67
LEMD3-203ENST00000541171 PNNQ9H307 717 aaKnown RBP31.7■■■□□ 2.67
LEMD3-203ENST00000541171 ARFGEF2Q9Y6D5 1785 aa31.69■■■□□ 2.66
LEMD3-203ENST00000541171 TTLL7Q6ZT98 887 aa31.69■■■□□ 2.66
LEMD3-203ENST00000541171 KIF6Q6ZMV9 814 aa31.68■■■□□ 2.66
LEMD3-203ENST00000541171 NUTM1Q86Y26 1132 aa31.68■■■□□ 2.66
LEMD3-203ENST00000541171 ZNF277Q9NRM2 450 aaPredicted RBP31.68■■■□□ 2.66
LEMD3-203ENST00000541171 LAMB4A4D0S4 1761 aa31.68■■■□□ 2.66
LEMD3-203ENST00000541171 ERVV-1B6SEH8 477 aa31.67■■■□□ 2.66
LEMD3-203ENST00000541171 FKBP4Q02790 459 aaKnown RBP eCLIP31.67■■■□□ 2.66
LEMD3-203ENST00000541171 MAP3K15Q6ZN16 1313 aa31.67■■■□□ 2.66
LEMD3-203ENST00000541171 KDM3BQ7LBC6 1761 aa31.66■■■□□ 2.66
LEMD3-203ENST00000541171 POTEIP0CG38 1075 aa31.66■■■□□ 2.66
LEMD3-203ENST00000541171 POTEJP0CG39 1038 aa31.66■■■□□ 2.66
LEMD3-203ENST00000541171 ALDH1B1P30837 517 aa31.66■■■□□ 2.66
LEMD3-203ENST00000541171 NYXQ9GZU5 481 aa31.66■■■□□ 2.66
LEMD3-203ENST00000541171 ZBTB3Q9H5J0 574 aa31.66■■■□□ 2.66
LEMD3-203ENST00000541171 GPTP24298 496 aa31.65■■■□□ 2.66
LEMD3-203ENST00000541171 CHADLQ6NUI6 762 aa31.65■■■□□ 2.66
LEMD3-203ENST00000541171 RTKN2Q8IZC4 609 aa31.64■■■□□ 2.66
LEMD3-203ENST00000541171 TSPYL4Q9UJ04 414 aa31.63■■■□□ 2.65
LEMD3-203ENST00000541171 ABCC12Q96J65 1359 aa31.63■■■□□ 2.65
LEMD3-203ENST00000541171 IQCA1LA6NCM1 817 aa31.61■■■□□ 2.65
LEMD3-203ENST00000541171 SYNE4Q8N205 404 aa31.61■■■□□ 2.65
LEMD3-203ENST00000541171 ZNF541Q9H0D2 1346 aa31.6■■■□□ 2.65
LEMD3-203ENST00000541171 RIPK4P57078 832 aa31.6■■■□□ 2.65
LEMD3-203ENST00000541171 COL13A1Q5TAT6 717 aaPredicted RBP31.59■■■□□ 2.65
LEMD3-203ENST00000541171 SUSD4Q5VX71 490 aa31.59■■■□□ 2.65
LEMD3-203ENST00000541171 UBN2Q6ZU65 1347 aa31.58■■■□□ 2.65
LEMD3-203ENST00000541171 EIF2S2P20042 333 aaKnown RBP31.58■■■□□ 2.65
LEMD3-203ENST00000541171 IARSP41252 1262 aaKnown RBP31.58■■■□□ 2.65
LEMD3-203ENST00000541171 CRY2Q49AN0 593 aa31.58■■■□□ 2.65
LEMD3-203ENST00000541171 RPGRQ92834 1020 aaKnown RBP31.58■■■□□ 2.65
LEMD3-203ENST00000541171 L3MBTL3Q96JM7 780 aaPredicted RBP31.58■■■□□ 2.65
LEMD3-203ENST00000541171 TAF1DQ9H5J8 278 aaPredicted RBP31.58■■■□□ 2.65
LEMD3-203ENST00000541171 NUP98P52948 1817 aa31.58■■■□□ 2.65
LEMD3-203ENST00000541171 RALBP1Q15311 655 aa31.55■■■□□ 2.64
LEMD3-203ENST00000541171 EAPPQ56P03 285 aaPredicted RBP31.55■■■□□ 2.64
LEMD3-203ENST00000541171 GIGYF2Q6Y7W6 1299 aaKnown RBP31.55■■■□□ 2.64
LEMD3-203ENST00000541171 ZNF34Q8IZ26 560 aa31.55■■■□□ 2.64
LEMD3-203ENST00000541171 ERBB4Q15303 1308 aa31.54■■■□□ 2.64
LEMD3-203ENST00000541171 LDHDQ86WU2 507 aa31.54■■■□□ 2.64
LEMD3-203ENST00000541171 TCERG1O14776 1098 aaKnown RBP31.53■■■□□ 2.64
LEMD3-203ENST00000541171 HSPA1AP0DMV8 641 aaKnown RBP31.53■■■□□ 2.64
LEMD3-203ENST00000541171 HSPA1BP0DMV9 641 aaKnown RBP31.53■■■□□ 2.64
LEMD3-203ENST00000541171 CREBZFQ9NS37 354 aa31.53■■■□□ 2.64
LEMD3-203ENST00000541171 MKRN1Q9UHC7 482 aaKnown RBP31.53■■■□□ 2.64
LEMD3-203ENST00000541171 ANXA1P04083 346 aa31.52■■■□□ 2.64
LEMD3-203ENST00000541171 HACL1Q9UJ83 578 aa31.52■■■□□ 2.64
LEMD3-203ENST00000541171 CLEC11AQ9Y240 323 aa31.52■■■□□ 2.64
LEMD3-203ENST00000541171 FZD9O00144 591 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms