RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SCN7AQ01118 1682 aa18.56■□□□□ 0.56
LTBR-209ENST00000541102 FAM177BA6PVY3 158 aa18.55■□□□□ 0.56
LTBR-209ENST00000541102 CHL1O00533 1208 aa18.55■□□□□ 0.56
LTBR-209ENST00000541102 TTLL7Q6ZT98 887 aa18.55■□□□□ 0.56
LTBR-209ENST00000541102 NBPF5PQ86XG9 351 aaPredicted RBP18.55■□□□□ 0.56
LTBR-209ENST00000541102 NECTIN2Q92692 538 aa18.55■□□□□ 0.56
LTBR-209ENST00000541102 BRIP1Q9BX63 1249 aa18.55■□□□□ 0.56
LTBR-209ENST00000541102 NIP7Q9Y221 180 aaKnown RBP eCLIP18.55■□□□□ 0.56
LTBR-209ENST00000541102 NRXN2Q9P2S2 1712 aa18.54■□□□□ 0.56
LTBR-209ENST00000541102 PDE6BP35913 854 aa18.54■□□□□ 0.56
LTBR-209ENST00000541102 ST5P78524 1137 aa18.54■□□□□ 0.56
LTBR-209ENST00000541102 KIF6Q6ZMV9 814 aa18.54■□□□□ 0.56
LTBR-209ENST00000541102 TTLL6Q8N841 843 aa18.54■□□□□ 0.56
LTBR-209ENST00000541102 ZNF526Q8TF50 670 aaPredicted RBP18.54■□□□□ 0.56
LTBR-209ENST00000541102 ZNF622Q969S3 477 aaKnown RBP eCLIP18.54■□□□□ 0.56
LTBR-209ENST00000541102 ATP10DQ9P241 1426 aa18.54■□□□□ 0.56
LTBR-209ENST00000541102 LAMB4A4D0S4 1761 aa18.53■□□□□ 0.56
LTBR-209ENST00000541102 KRT24Q2M2I5 525 aa18.53■□□□□ 0.56
LTBR-209ENST00000541102 SALL2Q9Y467 1007 aaPredicted RBP18.53■□□□□ 0.56
LTBR-209ENST00000541102 BRCA1P38398 1863 aaKnown RBP18.52■□□□□ 0.56
LTBR-209ENST00000541102 ANXA1P04083 346 aa18.52■□□□□ 0.56
LTBR-209ENST00000541102 ZBTB3Q9H5J0 574 aa18.52■□□□□ 0.56
LTBR-209ENST00000541102 MAP3K15Q6ZN16 1313 aa18.51■□□□□ 0.55
LTBR-209ENST00000541102 BCORQ6W2J9 1755 aa18.51■□□□□ 0.55
LTBR-209ENST00000541102 ERVV-1B6SEH8 477 aa18.51■□□□□ 0.55
LTBR-209ENST00000541102 TPTE2Q6XPS3 522 aa18.51■□□□□ 0.55
LTBR-209ENST00000541102 ZNF219Q9P2Y4 722 aaPredicted RBP18.51■□□□□ 0.55
LTBR-209ENST00000541102 ERBB4Q15303 1308 aa18.5■□□□□ 0.55
LTBR-209ENST00000541102 RGL2O15211 777 aa18.5■□□□□ 0.55
LTBR-209ENST00000541102 GTF2E1P29083 439 aaPredicted RBP18.5■□□□□ 0.55
LTBR-209ENST00000541102 PDIA6Q15084 440 aa18.5■□□□□ 0.55
LTBR-209ENST00000541102 PROSER3Q2NL68 480 aa18.5■□□□□ 0.55
LTBR-209ENST00000541102 CFAP44Q96MT7 982 aa18.5■□□□□ 0.55
LTBR-209ENST00000541102 GPBP1L1Q9HC44 474 aaPredicted RBP18.5■□□□□ 0.55
LTBR-209ENST00000541102 PDZRN3Q9UPQ7 1066 aa18.5■□□□□ 0.55
LTBR-209ENST00000541102 GPTP24298 496 aa18.49■□□□□ 0.55
LTBR-209ENST00000541102 C9orf131Q5VYM1 1079 aa18.49■□□□□ 0.55
LTBR-209ENST00000541102 ADCY9O60503 1353 aa18.48■□□□□ 0.55
LTBR-209ENST00000541102 AIMP1Q12904 312 aaKnown RBP18.48■□□□□ 0.55
LTBR-209ENST00000541102 MBIPQ9NS73 344 aa18.48■□□□□ 0.55
LTBR-209ENST00000541102 ARFGEF1Q9Y6D6 1849 aa18.48■□□□□ 0.55
LTBR-209ENST00000541102 ANKRD31Q8N7Z5 1873 aa18.48■□□□□ 0.55
LTBR-209ENST00000541102 CALD1Q05682 793 aaKnown RBP18.47■□□□□ 0.55
LTBR-209ENST00000541102 WWC1Q8IX03 1113 aa18.47■□□□□ 0.55
LTBR-209ENST00000541102 C21orf2O43822 256 aa18.46■□□□□ 0.55
LTBR-209ENST00000541102 SRGNP10124 158 aa18.46■□□□□ 0.55
LTBR-209ENST00000541102 GNAI1P63096 354 aa18.46■□□□□ 0.55
LTBR-209ENST00000541102 RASSF7Q02833 373 aa18.46■□□□□ 0.55
LTBR-209ENST00000541102 COPS6Q7L5N1 327 aa18.46■□□□□ 0.55
LTBR-209ENST00000541102 LRP10Q7Z4F1 713 aa18.46■□□□□ 0.55
LTBR-209ENST00000541102 XAGE3Q8WTP9 111 aa18.46■□□□□ 0.55
LTBR-209ENST00000541102 CNKSR1Q969H4 720 aa18.46■□□□□ 0.55
LTBR-209ENST00000541102 IFT57Q9NWB7 429 aa18.46■□□□□ 0.55
LTBR-209ENST00000541102 RNF181Q9P0P0 153 aa18.46■□□□□ 0.55
LTBR-209ENST00000541102 ZNF853P0CG23 659 aa18.45■□□□□ 0.54
LTBR-209ENST00000541102 HDGFL1Q5TGJ6 251 aa18.45■□□□□ 0.54
LTBR-209ENST00000541102 DUSP27Q5VZP5 1158 aa18.45■□□□□ 0.54
LTBR-209ENST00000541102 STYK1Q6J9G0 422 aa18.45■□□□□ 0.54
LTBR-209ENST00000541102 GIGYF2Q6Y7W6 1299 aaKnown RBP18.45■□□□□ 0.54
LTBR-209ENST00000541102 NUTM1Q86Y26 1132 aa18.45■□□□□ 0.54
LTBR-209ENST00000541102 MASTLQ96GX5 879 aa18.45■□□□□ 0.54
LTBR-209ENST00000541102 DDX21Q9NR30 783 aaKnown RBP eCLIP18.45■□□□□ 0.54
LTBR-209ENST00000541102 CHPF2Q9P2E5 772 aa18.45■□□□□ 0.54
LTBR-209ENST00000541102 ELL2O00472 640 aaPredicted RBP18.44■□□□□ 0.54
LTBR-209ENST00000541102 C1QTNF8P60827 252 aa18.44■□□□□ 0.54
LTBR-209ENST00000541102 CCDC27Q2M243 656 aa18.44■□□□□ 0.54
LTBR-209ENST00000541102 ERFEQ4G0M1 354 aa18.44■□□□□ 0.54
LTBR-209ENST00000541102 SUSD4Q5VX71 490 aa18.44■□□□□ 0.54
LTBR-209ENST00000541102 ZNF34Q8IZ26 560 aa18.44■□□□□ 0.54
LTBR-209ENST00000541102 NYXQ9GZU5 481 aa18.44■□□□□ 0.54
LTBR-209ENST00000541102 DLEC1Q9Y238 1755 aa18.43■□□□□ 0.54
LTBR-209ENST00000541102 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
LTBR-209ENST00000541102 NUP98P52948 1817 aa18.43■□□□□ 0.54
LTBR-209ENST00000541102 UBN2Q6ZU65 1347 aa18.43■□□□□ 0.54
LTBR-209ENST00000541102 HOXB7P09629 217 aa18.42■□□□□ 0.54
LTBR-209ENST00000541102 NPR1P16066 1061 aa18.42■□□□□ 0.54
LTBR-209ENST00000541102 PRPF40BQ6NWY9 871 aaKnown RBP18.42■□□□□ 0.54
LTBR-209ENST00000541102 COL11A2P13942 1736 aaPredicted RBP18.41■□□□□ 0.54
LTBR-209ENST00000541102 LMNB1P20700 586 aa18.41■□□□□ 0.54
LTBR-209ENST00000541102 ZNF521Q96K83 1311 aa18.41■□□□□ 0.54
LTBR-209ENST00000541102 KLRG2A4D1S0 409 aaPredicted RBP18.4■□□□□ 0.54
LTBR-209ENST00000541102 NFKBIEO00221 500 aa18.4■□□□□ 0.54
LTBR-209ENST00000541102 PRELPP51888 382 aa18.4■□□□□ 0.54
LTBR-209ENST00000541102 NCBP3Q53F19 620 aaKnown RBP18.4■□□□□ 0.54
LTBR-209ENST00000541102 PARP10Q53GL7 1025 aa18.4■□□□□ 0.54
LTBR-209ENST00000541102 PPP1R42Q7Z4L9 355 aa18.4■□□□□ 0.54
LTBR-209ENST00000541102 DBF4Q9UBU7 674 aaPredicted RBP18.4■□□□□ 0.54
LTBR-209ENST00000541102 HSP90AB3PQ58FF7 597 aa18.39■□□□□ 0.53
LTBR-209ENST00000541102 C8orf58Q8NAV2 365 aa18.39■□□□□ 0.53
LTBR-209ENST00000541102 ABCC12Q96J65 1359 aa18.39■□□□□ 0.53
LTBR-209ENST00000541102 SLX4Q8IY92 1834 aa18.38■□□□□ 0.53
LTBR-209ENST00000541102 NTSR2O95665 410 aa18.38■□□□□ 0.53
LTBR-209ENST00000541102 TSR2Q969E8 191 aaKnown RBP18.38■□□□□ 0.53
LTBR-209ENST00000541102 ZNF428Q96B54 188 aa18.38■□□□□ 0.53
LTBR-209ENST00000541102 UTP14AQ9BVJ6 771 aaKnown RBP18.38■□□□□ 0.53
LTBR-209ENST00000541102 HYPKQ9NX55 129 aa18.38■□□□□ 0.53
LTBR-209ENST00000541102 ALDH1B1P30837 517 aa18.37■□□□□ 0.53
LTBR-209ENST00000541102 TCIRG1Q13488 830 aa18.37■□□□□ 0.53
LTBR-209ENST00000541102 ANKRD13DQ6ZTN6 518 aa18.37■□□□□ 0.53
LTBR-209ENST00000541102 RPGRQ92834 1020 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms