RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 STRCQ7RTU9 1775 aa13.79□□□□□ -0.2
LGR5-203ENST00000540815 CYP27B1O15528 508 aa13.78□□□□□ -0.2
LGR5-203ENST00000540815 NUTM1Q86Y26 1132 aa13.78□□□□□ -0.2
LGR5-203ENST00000540815 C9orf78Q9NZ63 289 aaPredicted RBP13.78□□□□□ -0.2
LGR5-203ENST00000540815 UTYO14607 1347 aa13.78□□□□□ -0.2
LGR5-203ENST00000540815 NFATC2IPQ8NCF5 419 aa13.78□□□□□ -0.2
LGR5-203ENST00000540815 LINS1Q8NG48 757 aa13.78□□□□□ -0.2
LGR5-203ENST00000540815 GBP4Q96PP9 640 aa13.78□□□□□ -0.2
LGR5-203ENST00000540815 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
LGR5-203ENST00000540815 CWF19L2Q2TBE0 894 aaKnown RBP13.77□□□□□ -0.2
LGR5-203ENST00000540815 PI4K2BQ8TCG2 481 aa13.77□□□□□ -0.2
LGR5-203ENST00000540815 USP42Q9H9J4 1324 aaKnown RBP13.77□□□□□ -0.2
LGR5-203ENST00000540815 EPB41L2O43491 1005 aaKnown RBP13.77□□□□□ -0.21
LGR5-203ENST00000540815 MCCP23508 829 aa13.77□□□□□ -0.21
LGR5-203ENST00000540815 DCAF5Q96JK2 942 aa13.77□□□□□ -0.21
LGR5-203ENST00000540815 PTMSP20962 102 aa13.76□□□□□ -0.21
LGR5-203ENST00000540815 IL17RAQ96F46 866 aa13.76□□□□□ -0.21
LGR5-203ENST00000540815 ZNF496Q96IT1 587 aaPredicted RBP13.76□□□□□ -0.21
LGR5-203ENST00000540815 GLI3P10071 1580 aa13.76□□□□□ -0.21
LGR5-203ENST00000540815 GRM8O00222 908 aa13.75□□□□□ -0.21
LGR5-203ENST00000540815 ANAPC15P60006 121 aa13.75□□□□□ -0.21
LGR5-203ENST00000540815 CLEC17AQ6ZS10 378 aa13.75□□□□□ -0.21
LGR5-203ENST00000540815 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
LGR5-203ENST00000540815 KAZALD1Q96I82 304 aa13.75□□□□□ -0.21
LGR5-203ENST00000540815 LAMB4A4D0S4 1761 aa13.75□□□□□ -0.21
LGR5-203ENST00000540815 TTC41PQ6P2S7 1318 aa13.75□□□□□ -0.21
LGR5-203ENST00000540815 LARP1Q6PKG0 1096 aaKnown RBP13.74□□□□□ -0.21
LGR5-203ENST00000540815 LRP10Q7Z4F1 713 aa13.74□□□□□ -0.21
LGR5-203ENST00000540815 MPNDQ8N594 471 aa13.74□□□□□ -0.21
LGR5-203ENST00000540815 IL25Q9H293 177 aa13.74□□□□□ -0.21
LGR5-203ENST00000540815 TPM2P07951 284 aa13.74□□□□□ -0.21
LGR5-203ENST00000540815 AIMP1Q12904 312 aaKnown RBP13.74□□□□□ -0.21
LGR5-203ENST00000540815 OS9Q13438 667 aaPredicted RBP13.74□□□□□ -0.21
LGR5-203ENST00000540815 CWC22Q9HCG8 908 aaKnown RBP13.74□□□□□ -0.21
LGR5-203ENST00000540815 ANO2Q9NQ90 1003 aa13.74□□□□□ -0.21
LGR5-203ENST00000540815 IGKV5-2P06315 115 aa13.73□□□□□ -0.21
LGR5-203ENST00000540815 RIC3Q7Z5B4 369 aa13.73□□□□□ -0.21
LGR5-203ENST00000540815 CNTROBQ8N137 903 aa13.73□□□□□ -0.21
LGR5-203ENST00000540815 TSC1Q92574 1164 aa13.73□□□□□ -0.21
LGR5-203ENST00000540815 SUCLG2Q96I99 432 aa13.73□□□□□ -0.21
LGR5-203ENST00000540815 SNRPA1P09661 255 aaKnown RBP13.73□□□□□ -0.21
LGR5-203ENST00000540815 SSFA2P28290 1259 aa13.73□□□□□ -0.21
LGR5-203ENST00000540815 TTC5Q8N0Z6 440 aa13.73□□□□□ -0.21
LGR5-203ENST00000540815 MCM2P49736 904 aa13.72□□□□□ -0.21
LGR5-203ENST00000540815 NUCB2P80303 420 aa13.72□□□□□ -0.21
LGR5-203ENST00000540815 CLASRPQ8N2M8 674 aaKnown RBP13.72□□□□□ -0.21
LGR5-203ENST00000540815 ZNF335Q9H4Z2 1342 aaPredicted RBP13.72□□□□□ -0.21
LGR5-203ENST00000540815 NCLP19338 710 aaKnown RBP13.72□□□□□ -0.21
LGR5-203ENST00000540815 XAGE3Q8WTP9 111 aa13.72□□□□□ -0.21
LGR5-203ENST00000540815 FMNL2Q96PY5 1086 aa13.72□□□□□ -0.21
LGR5-203ENST00000540815 PA2G4Q9UQ80 394 aaKnown RBP13.72□□□□□ -0.21
LGR5-203ENST00000540815 USP16Q9Y5T5 823 aa13.72□□□□□ -0.21
LGR5-203ENST00000540815 SOS2Q07890 1332 aaPredicted RBP13.72□□□□□ -0.21
LGR5-203ENST00000540815 GLRX3O76003 335 aaKnown RBP13.72□□□□□ -0.21
LGR5-203ENST00000540815 MYL6BP14649 208 aa13.72□□□□□ -0.21
LGR5-203ENST00000540815 PIP4K2AP48426 406 aaPredicted RBP13.72□□□□□ -0.21
LGR5-203ENST00000540815 NEXNQ0ZGT2 675 aa13.72□□□□□ -0.21
LGR5-203ENST00000540815 METTL22Q9BUU2 404 aaPredicted RBP13.72□□□□□ -0.21
LGR5-203ENST00000540815 BICC1Q9H694 974 aaKnown RBP13.72□□□□□ -0.21
LGR5-203ENST00000540815 ABCA3Q99758 1704 aa13.71□□□□□ -0.21
LGR5-203ENST00000540815 KDM4FA0A1W2PPD8 638 aa13.71□□□□□ -0.21
LGR5-203ENST00000540815 NEURL1BA8MQ27 555 aa13.71□□□□□ -0.21
LGR5-203ENST00000540815 MAP4K4O95819 1239 aaPredicted RBP13.71□□□□□ -0.21
LGR5-203ENST00000540815 CYP2E1P05181 493 aaPredicted RBP13.71□□□□□ -0.21
LGR5-203ENST00000540815 SKOR2Q2VWA4 1001 aaPredicted RBP13.71□□□□□ -0.21
LGR5-203ENST00000540815 PALD1Q9ULE6 856 aa13.71□□□□□ -0.21
LGR5-203ENST00000540815 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.71□□□□□ -0.21
LGR5-203ENST00000540815 ARFGEF2Q9Y6D5 1785 aa13.71□□□□□ -0.21
LGR5-203ENST00000540815 AFDNP55196 1824 aaKnown RBP13.71□□□□□ -0.21
LGR5-203ENST00000540815 FAM177BA6PVY3 158 aa13.71□□□□□ -0.22
LGR5-203ENST00000540815 NEK4P51957 841 aa13.71□□□□□ -0.22
LGR5-203ENST00000540815 CABP4P57796 275 aa13.71□□□□□ -0.22
LGR5-203ENST00000540815 COPS6Q7L5N1 327 aa13.71□□□□□ -0.22
LGR5-203ENST00000540815 SGSM2O43147 1006 aa13.7□□□□□ -0.22
LGR5-203ENST00000540815 NASPP49321 788 aaPredicted RBP13.7□□□□□ -0.22
LGR5-203ENST00000540815 GPATCH3Q96I76 525 aa13.7□□□□□ -0.22
LGR5-203ENST00000540815 WDR17Q8IZU2 1322 aa13.7□□□□□ -0.22
LGR5-203ENST00000540815 MSNP26038 577 aaKnown RBP13.7□□□□□ -0.22
LGR5-203ENST00000540815 HSPA4P34932 840 aa13.7□□□□□ -0.22
LGR5-203ENST00000540815 CHAMP1Q96JM3 812 aa13.7□□□□□ -0.22
LGR5-203ENST00000540815 UBR2Q8IWV8 1755 aa13.69□□□□□ -0.22
LGR5-203ENST00000540815 COL5A2P05997 1499 aaPredicted RBP13.69□□□□□ -0.22
LGR5-203ENST00000540815 GCKRQ14397 625 aa13.69□□□□□ -0.22
LGR5-203ENST00000540815 ECHDC1Q9NTX5 307 aa13.69□□□□□ -0.22
LGR5-203ENST00000540815 SLAIN2Q9P270 581 aa13.69□□□□□ -0.22
LGR5-203ENST00000540815 RAD50Q92878 1312 aa13.69□□□□□ -0.22
LGR5-203ENST00000540815 UQCRHLA0A096LP55 91 aa13.69□□□□□ -0.22
LGR5-203ENST00000540815 UQCRHP07919 91 aa13.69□□□□□ -0.22
LGR5-203ENST00000540815 IFIT2P09913 472 aaKnown RBP13.69□□□□□ -0.22
LGR5-203ENST00000540815 ANKRD13DQ6ZTN6 518 aa13.69□□□□□ -0.22
LGR5-203ENST00000540815 MYD88Q99836 296 aa13.69□□□□□ -0.22
LGR5-203ENST00000540815 PRDM11Q9NQV5 511 aa13.69□□□□□ -0.22
LGR5-203ENST00000540815 PCDH11XQ9BZA7 1347 aa13.68□□□□□ -0.22
LGR5-203ENST00000540815 PCDH11YQ9BZA8 1340 aa13.68□□□□□ -0.22
LGR5-203ENST00000540815 GOLGA6L22H0YM25 854 aa13.68□□□□□ -0.22
LGR5-203ENST00000540815 BAG4O95429 457 aaKnown RBP13.68□□□□□ -0.22
LGR5-203ENST00000540815 G3BP1Q13283 466 aaKnown RBP eCLIP13.68□□□□□ -0.22
LGR5-203ENST00000540815 PAPPAQ13219 1627 aa13.68□□□□□ -0.22
LGR5-203ENST00000540815 SHANK3Q9BYB0 1731 aa13.68□□□□□ -0.22
LGR5-203ENST00000540815 ZGPATQ8N5A5 531 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms