RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 MIS18AQ9NYP9 233 aa22.09■■□□□ 1.13
PSMD3-204ENST00000540504 TNRC6CQ9HCJ0 1690 aaKnown RBP22.09■■□□□ 1.13
PSMD3-204ENST00000540504 STYK1Q6J9G0 422 aa22.08■■□□□ 1.13
PSMD3-204ENST00000540504 RBM46Q8TBY0 533 aaKnown RBP22.08■■□□□ 1.13
PSMD3-204ENST00000540504 CNKSR1Q969H4 720 aa22.08■■□□□ 1.13
PSMD3-204ENST00000540504 NFKBIEO00221 500 aa22.07■■□□□ 1.12
PSMD3-204ENST00000540504 NBPF5PQ86XG9 351 aaPredicted RBP22.07■■□□□ 1.12
PSMD3-204ENST00000540504 CCDC24Q8N4L8 307 aa22.07■■□□□ 1.12
PSMD3-204ENST00000540504 CCDC88AQ3V6T2 1871 aa22.07■■□□□ 1.12
PSMD3-204ENST00000540504 SRGNP10124 158 aa22.06■■□□□ 1.12
PSMD3-204ENST00000540504 APLP1P51693 650 aa22.06■■□□□ 1.12
PSMD3-204ENST00000540504 EIF4A1P60842 406 aaKnown RBP22.06■■□□□ 1.12
PSMD3-204ENST00000540504 TPTE2Q6XPS3 522 aa22.06■■□□□ 1.12
PSMD3-204ENST00000540504 C21orf2O43822 256 aa22.05■■□□□ 1.12
PSMD3-204ENST00000540504 MASTLQ96GX5 879 aa22.05■■□□□ 1.12
PSMD3-204ENST00000540504 NIP7Q9Y221 180 aaKnown RBP eCLIP22.05■■□□□ 1.12
PSMD3-204ENST00000540504 FER1L6Q2WGJ9 1857 aa22.05■■□□□ 1.12
PSMD3-204ENST00000540504 ARFGEF2Q9Y6D5 1785 aa22.04■■□□□ 1.12
PSMD3-204ENST00000540504 PRELPP51888 382 aa22.04■■□□□ 1.12
PSMD3-204ENST00000540504 SOGA3Q5TF21 947 aa22.04■■□□□ 1.12
PSMD3-204ENST00000540504 RRAGCQ9HB90 399 aa22.04■■□□□ 1.12
PSMD3-204ENST00000540504 LTBP3Q9NS15 1303 aa22.04■■□□□ 1.12
PSMD3-204ENST00000540504 TIAM2Q8IVF5 1701 aa22.03■■□□□ 1.12
PSMD3-204ENST00000540504 GLTPD2A6NH11 291 aa22.03■■□□□ 1.12
PSMD3-204ENST00000540504 FSTL1Q12841 308 aa22.03■■□□□ 1.12
PSMD3-204ENST00000540504 THUMPD2Q9BTF0 503 aaKnown RBP22.03■■□□□ 1.12
PSMD3-204ENST00000540504 ERVV-1B6SEH8 477 aa22.02■■□□□ 1.12
PSMD3-204ENST00000540504 MYBBP1AQ9BQG0 1328 aaKnown RBP22.02■■□□□ 1.12
PSMD3-204ENST00000540504 DICER1Q9UPY3 1922 aaKnown RBP22.02■■□□□ 1.11
PSMD3-204ENST00000540504 SLX4Q8IY92 1834 aa22.01■■□□□ 1.11
PSMD3-204ENST00000540504 CACNA1SQ13698 1873 aa22.01■■□□□ 1.11
PSMD3-204ENST00000540504 KLRG2A4D1S0 409 aaPredicted RBP22.01■■□□□ 1.11
PSMD3-204ENST00000540504 LMOD3Q0VAK6 560 aa22.01■■□□□ 1.11
PSMD3-204ENST00000540504 DDX10Q13206 875 aaKnown RBP22.01■■□□□ 1.11
PSMD3-204ENST00000540504 PRPF40BQ6NWY9 871 aaKnown RBP22.01■■□□□ 1.11
PSMD3-204ENST00000540504 BABAM1Q9NWV8 329 aa22.01■■□□□ 1.11
PSMD3-204ENST00000540504 ERBB4Q15303 1308 aa22.01■■□□□ 1.11
PSMD3-204ENST00000540504 NPR1P16066 1061 aa22■■□□□ 1.11
PSMD3-204ENST00000540504 RIPK4P57078 832 aa22■■□□□ 1.11
PSMD3-204ENST00000540504 HLFQ16534 295 aa22■■□□□ 1.11
PSMD3-204ENST00000540504 ZNF219Q9P2Y4 722 aaPredicted RBP22■■□□□ 1.11
PSMD3-204ENST00000540504 VEGFAP15692 232 aaPredicted RBP21.99■■□□□ 1.11
PSMD3-204ENST00000540504 DPY19L2Q6NUT2 758 aa21.99■■□□□ 1.11
PSMD3-204ENST00000540504 TAOK3Q9H2K8 898 aa21.99■■□□□ 1.11
PSMD3-204ENST00000540504 TSPYL4Q9UJ04 414 aa21.99■■□□□ 1.11
PSMD3-204ENST00000540504 MAP3K15Q6ZN16 1313 aa21.99■■□□□ 1.11
PSMD3-204ENST00000540504 NUP98P52948 1817 aa21.99■■□□□ 1.11
PSMD3-204ENST00000540504 TMPOP42166 694 aaKnown RBP21.98■■□□□ 1.11
PSMD3-204ENST00000540504 KIF6Q6ZMV9 814 aa21.98■■□□□ 1.11
PSMD3-204ENST00000540504 NYXQ9GZU5 481 aa21.98■■□□□ 1.11
PSMD3-204ENST00000540504 RRP7AQ9Y3A4 280 aaKnown RBP21.98■■□□□ 1.11
PSMD3-204ENST00000540504 GTF2E1P29083 439 aaPredicted RBP21.97■■□□□ 1.11
PSMD3-204ENST00000540504 ERFEQ4G0M1 354 aa21.97■■□□□ 1.11
PSMD3-204ENST00000540504 NGEFQ8N5V2 710 aa21.97■■□□□ 1.11
PSMD3-204ENST00000540504 MYL6BP14649 208 aa21.96■■□□□ 1.11
PSMD3-204ENST00000540504 SMC1BQ8NDV3 1235 aa21.96■■□□□ 1.11
PSMD3-204ENST00000540504 C7orf43Q8WVR3 580 aa21.96■■□□□ 1.11
PSMD3-204ENST00000540504 FAM177BA6PVY3 158 aa21.95■■□□□ 1.1
PSMD3-204ENST00000540504 ALDH1B1P30837 517 aa21.95■■□□□ 1.1
PSMD3-204ENST00000540504 CCDC93Q567U6 631 aa21.95■■□□□ 1.1
PSMD3-204ENST00000540504 TTLL7Q6ZT98 887 aa21.95■■□□□ 1.1
PSMD3-204ENST00000540504 WDR90Q96KV7 1748 aa21.94■■□□□ 1.1
PSMD3-204ENST00000540504 IBTKQ9P2D0 1353 aaPredicted RBP21.94■■□□□ 1.1
PSMD3-204ENST00000540504 DNAJC5GQ8N7S2 189 aa21.93■■□□□ 1.1
PSMD3-204ENST00000540504 RIC1Q4ADV7 1423 aa21.92■■□□□ 1.1
PSMD3-204ENST00000540504 WDR43Q15061 677 aaKnown RBP eCLIP21.92■■□□□ 1.1
PSMD3-204ENST00000540504 GIGYF2Q6Y7W6 1299 aaKnown RBP21.92■■□□□ 1.1
PSMD3-204ENST00000540504 ZBTB3Q9H5J0 574 aa21.92■■□□□ 1.1
PSMD3-204ENST00000540504 CRY2Q49AN0 593 aa21.91■■□□□ 1.1
PSMD3-204ENST00000540504 RTKN2Q8IZC4 609 aa21.91■■□□□ 1.1
PSMD3-204ENST00000540504 RUNDC1Q96C34 613 aa21.91■■□□□ 1.1
PSMD3-204ENST00000540504 FKBP4Q02790 459 aaKnown RBP eCLIP21.9■■□□□ 1.1
PSMD3-204ENST00000540504 ZNF34Q8IZ26 560 aa21.9■■□□□ 1.1
PSMD3-204ENST00000540504 UBN2Q6ZU65 1347 aa21.89■■□□□ 1.1
PSMD3-204ENST00000540504 POTECB2RU33 542 aa21.89■■□□□ 1.09
PSMD3-204ENST00000540504 EIF2S2P20042 333 aaKnown RBP21.89■■□□□ 1.09
PSMD3-204ENST00000540504 PDIA6Q15084 440 aa21.89■■□□□ 1.09
PSMD3-204ENST00000540504 PARP10Q53GL7 1025 aa21.89■■□□□ 1.09
PSMD3-204ENST00000540504 LRP10Q7Z4F1 713 aa21.89■■□□□ 1.09
PSMD3-204ENST00000540504 NUTM1Q86Y26 1132 aa21.89■■□□□ 1.09
PSMD3-204ENST00000540504 ABCC12Q96J65 1359 aa21.88■■□□□ 1.09
PSMD3-204ENST00000540504 GPTP24298 496 aa21.88■■□□□ 1.09
PSMD3-204ENST00000540504 PPP1R42Q7Z4L9 355 aa21.88■■□□□ 1.09
PSMD3-204ENST00000540504 CCDC146Q8IYE0 955 aa21.88■■□□□ 1.09
PSMD3-204ENST00000540504 CHL1O00533 1208 aa21.87■■□□□ 1.09
PSMD3-204ENST00000540504 NEUROD2Q15784 382 aa21.87■■□□□ 1.09
PSMD3-204ENST00000540504 SUSD4Q5VX71 490 aa21.87■■□□□ 1.09
PSMD3-204ENST00000540504 CC2D2BQ6DHV5 1058 aa21.87■■□□□ 1.09
PSMD3-204ENST00000540504 HOXA10P31260 410 aaPredicted RBP21.86■■□□□ 1.09
PSMD3-204ENST00000540504 RPGRQ92834 1020 aaKnown RBP21.86■■□□□ 1.09
PSMD3-204ENST00000540504 PRKRIP1Q9H875 184 aaPredicted RBP21.86■■□□□ 1.09
PSMD3-204ENST00000540504 DDNO94850 711 aaPredicted RBP21.85■■□□□ 1.09
PSMD3-204ENST00000540504 NTSR2O95665 410 aa21.85■■□□□ 1.09
PSMD3-204ENST00000540504 GRIPAP1Q4V328 841 aa21.85■■□□□ 1.09
PSMD3-204ENST00000540504 ADAMTS8Q9UP79 889 aa21.85■■□□□ 1.09
PSMD3-204ENST00000540504 TRIM35Q9UPQ4 493 aa21.85■■□□□ 1.09
PSMD3-204ENST00000540504 HSP90AB3PQ58FF7 597 aa21.84■■□□□ 1.09
PSMD3-204ENST00000540504 KLRG1Q96E93 195 aa21.84■■□□□ 1.09
PSMD3-204ENST00000540504 RNF123Q5XPI4 1314 aa21.83■■□□□ 1.09
PSMD3-204ENST00000540504 IQCA1LA6NCM1 817 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms