RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 USP6P35125 1406 aa16.65■□□□□ 0.26
SCNN1A-215ENST00000540037 POLA2Q14181 598 aa16.65■□□□□ 0.26
SCNN1A-215ENST00000540037 HDGFL1Q5TGJ6 251 aa16.65■□□□□ 0.26
SCNN1A-215ENST00000540037 NRBP1Q9UHY1 535 aa16.65■□□□□ 0.26
SCNN1A-215ENST00000540037 GNAT3A8MTJ3 354 aa16.64■□□□□ 0.25
SCNN1A-215ENST00000540037 FAM208AQ9UK61 1670 aaKnown RBP16.64■□□□□ 0.25
SCNN1A-215ENST00000540037 CDC37L1Q7L3B6 337 aa16.64■□□□□ 0.25
SCNN1A-215ENST00000540037 PDCL2Q8N4E4 241 aa16.64■□□□□ 0.25
SCNN1A-215ENST00000540037 USHBP1Q8N6Y0 703 aa16.64■□□□□ 0.25
SCNN1A-215ENST00000540037 KIF1BPQ96EK5 621 aa16.63■□□□□ 0.25
SCNN1A-215ENST00000540037 DIAPH3Q9NSV4 1193 aa16.63■□□□□ 0.25
SCNN1A-215ENST00000540037 ATP6V1DQ9Y5K8 247 aa16.63■□□□□ 0.25
SCNN1A-215ENST00000540037 TPCN1Q9ULQ1 816 aa16.63■□□□□ 0.25
SCNN1A-215ENST00000540037 RAB11FIP3O75154 756 aa16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 NAA30Q147X3 362 aaPredicted RBP16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 TAF7Q15545 349 aaPredicted RBP16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 TFIP11Q9UBB9 837 aaKnown RBP16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 MRVI1Q9Y6F6 885 aa16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 KDRP35968 1356 aa16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 USP31Q70CQ4 1352 aa16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 CCDC192P0DO97 292 aa16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 OS9Q13438 667 aaPredicted RBP16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 OSCARQ8IYS5 282 aa16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 PA2G4Q9UQ80 394 aaKnown RBP16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 TAF6LQ9Y6J9 622 aa16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 C16orf45Q96MC5 204 aaPredicted RBP16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.62■□□□□ 0.25
SCNN1A-215ENST00000540037 PI4KAP2A4QPH2 592 aa16.61■□□□□ 0.25
SCNN1A-215ENST00000540037 CCDC186Q7Z3E2 898 aa16.61■□□□□ 0.25
SCNN1A-215ENST00000540037 PI4KAP1Q8N8J0 262 aa16.61■□□□□ 0.25
SCNN1A-215ENST00000540037 PLEKHG3A1L390 1219 aa16.61■□□□□ 0.25
SCNN1A-215ENST00000540037 LARP1BQ659C4 914 aaKnown RBP16.61■□□□□ 0.25
SCNN1A-215ENST00000540037 FLT4P35916 1363 aa16.61■□□□□ 0.25
SCNN1A-215ENST00000540037 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.6■□□□□ 0.25
SCNN1A-215ENST00000540037 EPB41L2O43491 1005 aaKnown RBP16.6■□□□□ 0.25
SCNN1A-215ENST00000540037 TYRO3Q06418 890 aa16.6■□□□□ 0.25
SCNN1A-215ENST00000540037 FAM227BQ96M60 508 aa16.6■□□□□ 0.25
SCNN1A-215ENST00000540037 CHPF2Q9P2E5 772 aa16.6■□□□□ 0.25
SCNN1A-215ENST00000540037 CYP46A1Q9Y6A2 500 aa16.6■□□□□ 0.25
SCNN1A-215ENST00000540037 SPATA31D1Q6ZQQ2 1576 aa16.6■□□□□ 0.25
SCNN1A-215ENST00000540037 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.6■□□□□ 0.25
SCNN1A-215ENST00000540037 VPS53Q5VIR6 699 aa16.6■□□□□ 0.25
SCNN1A-215ENST00000540037 ZSWIM6Q9HCJ5 1215 aa16.6■□□□□ 0.25
SCNN1A-215ENST00000540037 DACT1Q9NYF0 836 aa16.6■□□□□ 0.25
SCNN1A-215ENST00000540037 KCNQ3O43525 872 aa16.59■□□□□ 0.25
SCNN1A-215ENST00000540037 CHAF1AQ13111 956 aaPredicted RBP16.59■□□□□ 0.25
SCNN1A-215ENST00000540037 ANO6Q4KMQ2 910 aa16.59■□□□□ 0.25
SCNN1A-215ENST00000540037 FAM200AQ8TCP9 573 aa16.59■□□□□ 0.25
SCNN1A-215ENST00000540037 NUP62CLQ9H1M0 184 aa16.59■□□□□ 0.25
SCNN1A-215ENST00000540037 SBNO1A3KN83 1393 aa16.59■□□□□ 0.25
SCNN1A-215ENST00000540037 CBX8Q9HC52 389 aa16.59■□□□□ 0.25
SCNN1A-215ENST00000540037 TECPR2O15040 1411 aa16.58■□□□□ 0.25
SCNN1A-215ENST00000540037 STK3Q13188 491 aa16.58■□□□□ 0.24
SCNN1A-215ENST00000540037 MAP3K11Q16584 847 aa16.58■□□□□ 0.24
SCNN1A-215ENST00000540037 UTP14CQ5TAP6 766 aaKnown RBP16.58■□□□□ 0.24
SCNN1A-215ENST00000540037 DRC7Q8IY82 874 aa16.58■□□□□ 0.24
SCNN1A-215ENST00000540037 ANKRD7Q92527 254 aa16.58■□□□□ 0.24
SCNN1A-215ENST00000540037 SLC26A8Q96RN1 970 aa16.58■□□□□ 0.24
SCNN1A-215ENST00000540037 NECTIN1Q15223 517 aa16.58■□□□□ 0.24
SCNN1A-215ENST00000540037 BEND3Q5T5X7 828 aa16.58■□□□□ 0.24
SCNN1A-215ENST00000540037 RBM8AQ9Y5S9 174 aaKnown RBP16.58■□□□□ 0.24
SCNN1A-215ENST00000540037 NALCNQ8IZF0 1738 aa16.58■□□□□ 0.24
SCNN1A-215ENST00000540037 GLRX3O76003 335 aaKnown RBP16.57■□□□□ 0.24
SCNN1A-215ENST00000540037 KCNJ4P48050 445 aa16.57■□□□□ 0.24
SCNN1A-215ENST00000540037 SIRT1Q96EB6 747 aa16.57■□□□□ 0.24
SCNN1A-215ENST00000540037 CTIFO43310 598 aaKnown RBP16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 NCBP1Q09161 790 aaKnown RBP16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 CREB3L3Q68CJ9 461 aa16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 NGDNQ8NEJ9 315 aaKnown RBP16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 TNMDQ9H2S6 317 aa16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 FMN2Q9NZ56 1722 aa16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 GOLGA6L6A8MZA4 724 aa16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 KRT85P78386 507 aa16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 LARP1Q6PKG0 1096 aaKnown RBP16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 LGR6Q9HBX8 967 aa16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 MAP3K5Q99683 1374 aa16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 NLRP6P59044 892 aa16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 DNAAF4Q8WXU2 420 aa16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 TRIM5Q9C035 493 aa16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 SH2B1Q9NRF2 756 aaPredicted RBP16.56■□□□□ 0.24
SCNN1A-215ENST00000540037 NR1I2O75469 434 aa16.55■□□□□ 0.24
SCNN1A-215ENST00000540037 CCDC171Q6TFL3 1326 aa16.55■□□□□ 0.24
SCNN1A-215ENST00000540037 CLASRPQ8N2M8 674 aaKnown RBP16.55■□□□□ 0.24
SCNN1A-215ENST00000540037 ZSCAN31Q96LW9 406 aaPredicted RBP16.55■□□□□ 0.24
SCNN1A-215ENST00000540037 DNAJC25Q9H1X3 360 aa16.55■□□□□ 0.24
SCNN1A-215ENST00000540037 NMIQ13287 307 aaPredicted RBP16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 ARID5BQ14865 1188 aa16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 CCDC144BQ3MJ40 725 aa16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 CCDC144CPQ8IYA2 1237 aa16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 DDX11Q96FC9 970 aa16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 ECHDC1Q9NTX5 307 aa16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 A0A087WWV3 80 aa16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 HTATSF1O43719 755 aaKnown RBP16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 HOXC9P31274 260 aa16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 ZSCAN25Q6NSZ9 544 aa16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 RUFY2Q8WXA3 655 aa16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 AACSQ86V21 672 aa16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 SPATA32Q96LK8 384 aa16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 CCDC8Q9H0W5 538 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms