RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 TCIRG1Q13488 830 aa9.86□□□□□ -0.83
GNE-205ENST00000539815 ARHGEF6Q15052 776 aa9.86□□□□□ -0.83
GNE-205ENST00000539815 AEBP1Q8IUX7 1158 aa9.86□□□□□ -0.83
GNE-205ENST00000539815 RNF123Q5XPI4 1314 aa9.86□□□□□ -0.83
GNE-205ENST00000539815 DPP8Q6V1X1 898 aaPredicted RBP9.86□□□□□ -0.83
GNE-205ENST00000539815 NBPF15Q8N660 670 aa9.86□□□□□ -0.83
GNE-205ENST00000539815 PNISRQ8TF01 805 aaKnown RBP9.86□□□□□ -0.83
GNE-205ENST00000539815 COL15A1P39059 1388 aa9.85□□□□□ -0.83
GNE-205ENST00000539815 MYL6BP14649 208 aa9.85□□□□□ -0.83
GNE-205ENST00000539815 IARSP41252 1262 aaKnown RBP9.85□□□□□ -0.83
GNE-205ENST00000539815 KCNJ4P48050 445 aa9.85□□□□□ -0.83
GNE-205ENST00000539815 GRIPAP1Q4V328 841 aa9.85□□□□□ -0.83
GNE-205ENST00000539815 ABCC6O95255 1503 aa9.85□□□□□ -0.83
GNE-205ENST00000539815 IL6STP40189 918 aaPredicted RBP9.85□□□□□ -0.83
GNE-205ENST00000539815 AIMP1Q12904 312 aaKnown RBP9.85□□□□□ -0.83
GNE-205ENST00000539815 A1BGP04217 495 aa9.85□□□□□ -0.83
GNE-205ENST00000539815 DDR1Q08345 913 aa9.85□□□□□ -0.83
GNE-205ENST00000539815 TPRNQ4KMQ1 711 aa9.85□□□□□ -0.83
GNE-205ENST00000539815 TAF7LQ5H9L4 462 aa9.85□□□□□ -0.83
GNE-205ENST00000539815 EYA3Q99504 573 aa9.85□□□□□ -0.83
GNE-205ENST00000539815 TAF1DQ9H5J8 278 aaPredicted RBP9.85□□□□□ -0.83
GNE-205ENST00000539815 TSKSQ9UJT2 592 aa9.85□□□□□ -0.83
GNE-205ENST00000539815 RBM19Q9Y4C8 960 aaKnown RBP9.85□□□□□ -0.83
GNE-205ENST00000539815 MEGF6O75095 1541 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 CARMIL3Q8ND23 1372 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 NEUROD2Q15784 382 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 HSP90AB3PQ58FF7 597 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 CIAPIN1Q6FI81 312 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 STYK1Q6J9G0 422 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 OGFOD1Q8N543 542 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 ZC3H12CQ9C0D7 883 aaKnown RBP9.84□□□□□ -0.83
GNE-205ENST00000539815 ALS2Q96Q42 1657 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 KCPQ6ZWJ8 1503 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 PARP4Q9UKK3 1724 aaKnown RBP9.84□□□□□ -0.83
GNE-205ENST00000539815 POLRMTO00411 1230 aaKnown RBP9.84□□□□□ -0.83
GNE-205ENST00000539815 FOXN1O15353 648 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 VEGFBP49765 207 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 JMYQ8N9B5 988 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 WDR33Q9C0J8 1336 aaKnown RBP9.84□□□□□ -0.83
GNE-205ENST00000539815 FKBP4Q02790 459 aaKnown RBP eCLIP9.84□□□□□ -0.83
GNE-205ENST00000539815 NOGQ13253 232 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 ZBTB3Q9H5J0 574 aa9.84□□□□□ -0.83
GNE-205ENST00000539815 SLIT3O75094 1523 aa9.83□□□□□ -0.84
GNE-205ENST00000539815 TRPM1Q7Z4N2 1603 aa9.83□□□□□ -0.84
GNE-205ENST00000539815 TOPAZ1Q8N9V7 1692 aa9.83□□□□□ -0.84
GNE-205ENST00000539815 NRAPQ86VF7 1730 aa9.83□□□□□ -0.84
GNE-205ENST00000539815 NPM3O75607 178 aaKnown RBP9.83□□□□□ -0.84
GNE-205ENST00000539815 WDR43Q15061 677 aaKnown RBP eCLIP9.83□□□□□ -0.84
GNE-205ENST00000539815 ZNF790Q6PG37 636 aa9.83□□□□□ -0.84
GNE-205ENST00000539815 NSFL1CQ9UNZ2 370 aaKnown RBP9.83□□□□□ -0.84
GNE-205ENST00000539815 CLSPNQ9HAW4 1339 aa9.83□□□□□ -0.84
GNE-205ENST00000539815 MYOM1P52179 1685 aa9.83□□□□□ -0.84
GNE-205ENST00000539815 ZNF157P51786 506 aaPredicted RBP9.83□□□□□ -0.84
GNE-205ENST00000539815 CDC37L1Q7L3B6 337 aa9.83□□□□□ -0.84
GNE-205ENST00000539815 MPNDQ8N594 471 aa9.83□□□□□ -0.84
GNE-205ENST00000539815 HSPA5P11021 654 aaKnown RBP9.82□□□□□ -0.84
GNE-205ENST00000539815 PRKAR2BP31323 418 aa9.82□□□□□ -0.84
GNE-205ENST00000539815 PRR5LQ6MZQ0 368 aa9.82□□□□□ -0.84
GNE-205ENST00000539815 CYP4F22Q6NT55 531 aa9.82□□□□□ -0.84
GNE-205ENST00000539815 LGR6Q9HBX8 967 aa9.82□□□□□ -0.84
GNE-205ENST00000539815 ANKIB1Q9P2G1 1089 aa9.82□□□□□ -0.84
GNE-205ENST00000539815 ZNF496Q96IT1 587 aaPredicted RBP9.82□□□□□ -0.84
GNE-205ENST00000539815 TRMT112Q9UI30 125 aaKnown RBP9.82□□□□□ -0.84
GNE-205ENST00000539815 PIP4K2AP48426 406 aaPredicted RBP9.81□□□□□ -0.84
GNE-205ENST00000539815 LMOD3Q0VAK6 560 aa9.81□□□□□ -0.84
GNE-205ENST00000539815 TBC1D9BQ66K14 1250 aa9.81□□□□□ -0.84
GNE-205ENST00000539815 TMEM106CQ9BVX2 250 aa9.81□□□□□ -0.84
GNE-205ENST00000539815 FRAT2O75474 233 aaPredicted RBP9.81□□□□□ -0.84
GNE-205ENST00000539815 CYP19A1P11511 503 aaPredicted RBP9.81□□□□□ -0.84
GNE-205ENST00000539815 OTUD7BQ6GQQ9 843 aa9.81□□□□□ -0.84
GNE-205ENST00000539815 CCDC102AQ96A19 550 aa9.81□□□□□ -0.84
GNE-205ENST00000539815 PHRF1Q9P1Y6 1649 aaKnown RBP9.81□□□□□ -0.84
GNE-205ENST00000539815 PPP4R3CPQ6ZMV5 832 aa9.8□□□□□ -0.84
GNE-205ENST00000539815 KRT26Q7Z3Y9 468 aa9.8□□□□□ -0.84
GNE-205ENST00000539815 GPC2Q8N158 579 aa9.8□□□□□ -0.84
GNE-205ENST00000539815 NECTIN2Q92692 538 aa9.8□□□□□ -0.84
GNE-205ENST00000539815 GCC1Q96CN9 775 aa9.8□□□□□ -0.84
GNE-205ENST00000539815 TESK2Q96S53 571 aa9.8□□□□□ -0.84
GNE-205ENST00000539815 TSPYL4Q9UJ04 414 aa9.8□□□□□ -0.84
GNE-205ENST00000539815 SOS1Q07889 1333 aaPredicted RBP9.8□□□□□ -0.84
GNE-205ENST00000539815 TRPM3Q9HCF6 1732 aaPredicted RBP9.8□□□□□ -0.84
GNE-205ENST00000539815 TRPA1O75762 1119 aa9.8□□□□□ -0.84
GNE-205ENST00000539815 RAD17O75943 681 aa9.8□□□□□ -0.84
GNE-205ENST00000539815 PLCB2Q00722 1185 aa9.8□□□□□ -0.84
GNE-205ENST00000539815 CLEC4GQ6UXB4 293 aa9.8□□□□□ -0.84
GNE-205ENST00000539815 BIN2Q9UBW5 565 aaPredicted RBP9.8□□□□□ -0.84
GNE-205ENST00000539815 RIMBP2O15034 1052 aa9.79□□□□□ -0.84
GNE-205ENST00000539815 DNAJC5GQ8N7S2 189 aa9.79□□□□□ -0.84
GNE-205ENST00000539815 UTP14AQ9BVJ6 771 aaKnown RBP9.79□□□□□ -0.84
GNE-205ENST00000539815 TNS1Q9HBL0 1735 aaKnown RBP9.79□□□□□ -0.84
GNE-205ENST00000539815 ADARB2Q9NS39 739 aaKnown RBP9.79□□□□□ -0.84
GNE-205ENST00000539815 MAP2K2P36507 400 aa9.79□□□□□ -0.84
GNE-205ENST00000539815 GOLGA2Q08379 1002 aa9.79□□□□□ -0.84
GNE-205ENST00000539815 DDX21Q9NR30 783 aaKnown RBP eCLIP9.79□□□□□ -0.84
GNE-205ENST00000539815 NSD2O96028 1365 aa9.79□□□□□ -0.84
GNE-205ENST00000539815 PPEF1O14829 653 aaPredicted RBP9.78□□□□□ -0.84
GNE-205ENST00000539815 MTHFSDQ2M296 383 aaKnown RBP9.78□□□□□ -0.84
GNE-205ENST00000539815 PARP10Q53GL7 1025 aa9.78□□□□□ -0.84
GNE-205ENST00000539815 RTL5Q5HYW3 569 aaPredicted RBP9.78□□□□□ -0.84
GNE-205ENST00000539815 USP50Q70EL3 339 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms