RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SMTNL1A8MU46 457 aa20.97■□□□□ 0.95
RAB40C-205ENST00000539661 RHPN1Q8TCX5 695 aa20.97■□□□□ 0.95
RAB40C-205ENST00000539661 KIF1BPQ96EK5 621 aa20.97■□□□□ 0.95
RAB40C-205ENST00000539661 USP42Q9H9J4 1324 aaKnown RBP20.97■□□□□ 0.95
RAB40C-205ENST00000539661 CASTP20810 708 aaKnown RBP20.96■□□□□ 0.95
RAB40C-205ENST00000539661 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.96■□□□□ 0.95
RAB40C-205ENST00000539661 KCNB2Q92953 911 aa20.96■□□□□ 0.95
RAB40C-205ENST00000539661 FMN2Q9NZ56 1722 aa20.96■□□□□ 0.95
RAB40C-205ENST00000539661 MAP3K19Q56UN5 1328 aa20.96■□□□□ 0.95
RAB40C-205ENST00000539661 RUFY2Q8WXA3 655 aa20.96■□□□□ 0.95
RAB40C-205ENST00000539661 CHD2O14647 1828 aaKnown RBP20.95■□□□□ 0.94
RAB40C-205ENST00000539661 U2AF2P26368 475 aaKnown RBP eCLIP20.95■□□□□ 0.94
RAB40C-205ENST00000539661 CCDC83Q8IWF9 413 aa20.95■□□□□ 0.94
RAB40C-205ENST00000539661 NUP62CLQ9H1M0 184 aa20.95■□□□□ 0.94
RAB40C-205ENST00000539661 PDRG1Q9NUG6 133 aa20.95■□□□□ 0.94
RAB40C-205ENST00000539661 PRR36Q9H6K5 1346 aa20.95■□□□□ 0.94
RAB40C-205ENST00000539661 KRT85P78386 507 aa20.95■□□□□ 0.94
RAB40C-205ENST00000539661 TNRQ92752 1358 aa20.95■□□□□ 0.94
RAB40C-205ENST00000539661 FOXO3O43524 673 aa20.94■□□□□ 0.94
RAB40C-205ENST00000539661 LARGE1O95461 756 aa20.94■□□□□ 0.94
RAB40C-205ENST00000539661 PTGS1P23219 599 aa20.94■□□□□ 0.94
RAB40C-205ENST00000539661 TYRO3Q06418 890 aa20.94■□□□□ 0.94
RAB40C-205ENST00000539661 TPRNQ4KMQ1 711 aa20.94■□□□□ 0.94
RAB40C-205ENST00000539661 ZSWIM6Q9HCJ5 1215 aa20.94■□□□□ 0.94
RAB40C-205ENST00000539661 MRVI1Q9Y6F6 885 aa20.94■□□□□ 0.94
RAB40C-205ENST00000539661 SPDYE4A6NLX3 237 aa20.94■□□□□ 0.94
RAB40C-205ENST00000539661 SURF6O75683 361 aaKnown RBP20.94■□□□□ 0.94
RAB40C-205ENST00000539661 NCBP1Q09161 790 aaKnown RBP20.94■□□□□ 0.94
RAB40C-205ENST00000539661 BABAM1Q9NWV8 329 aa20.94■□□□□ 0.94
RAB40C-205ENST00000539661 PAXBP1Q9Y5B6 917 aa20.94■□□□□ 0.94
RAB40C-205ENST00000539661 TTC41PQ6P2S7 1318 aa20.94■□□□□ 0.94
RAB40C-205ENST00000539661 TOPAZ1Q8N9V7 1692 aa20.94■□□□□ 0.94
RAB40C-205ENST00000539661 TAF3Q5VWG9 929 aa20.93■□□□□ 0.94
RAB40C-205ENST00000539661 ROBO2Q9HCK4 1378 aa20.93■□□□□ 0.94
RAB40C-205ENST00000539661 HSP90AB4PQ58FF6 505 aa20.93■□□□□ 0.94
RAB40C-205ENST00000539661 CYP46A1Q9Y6A2 500 aa20.93■□□□□ 0.94
RAB40C-205ENST00000539661 MAP4K4O95819 1239 aaPredicted RBP20.92■□□□□ 0.94
RAB40C-205ENST00000539661 PPP1R42Q7Z4L9 355 aa20.92■□□□□ 0.94
RAB40C-205ENST00000539661 CGNQ9P2M7 1197 aaKnown RBP20.92■□□□□ 0.94
RAB40C-205ENST00000539661 RIMS1Q86UR5 1692 aaKnown RBP20.92■□□□□ 0.94
RAB40C-205ENST00000539661 PDCP20941 246 aa20.91■□□□□ 0.94
RAB40C-205ENST00000539661 CWC27Q6UX04 472 aaKnown RBP20.91■□□□□ 0.94
RAB40C-205ENST00000539661 ADGRL3Q9HAR2 1447 aa20.91■□□□□ 0.94
RAB40C-205ENST00000539661 VPS37CA5D8V6 355 aaPredicted RBP20.91■□□□□ 0.94
RAB40C-205ENST00000539661 GLRX3O76003 335 aaKnown RBP20.91■□□□□ 0.94
RAB40C-205ENST00000539661 GABPB1Q06547 395 aaPredicted RBP20.91■□□□□ 0.94
RAB40C-205ENST00000539661 RBM43Q6ZSC3 357 aaKnown RBP20.91■□□□□ 0.94
RAB40C-205ENST00000539661 TTC6Q86TZ1 520 aa20.91■□□□□ 0.94
RAB40C-205ENST00000539661 PLA2G4DQ86XP0 818 aa20.91■□□□□ 0.94
RAB40C-205ENST00000539661 LARP6Q9BRS8 491 aaKnown RBP20.91■□□□□ 0.94
RAB40C-205ENST00000539661 DDX19AQ9NUU7 478 aaKnown RBP20.91■□□□□ 0.94
RAB40C-205ENST00000539661 USP6P35125 1406 aa20.91■□□□□ 0.94
RAB40C-205ENST00000539661 PLEKHG3A1L390 1219 aa20.91■□□□□ 0.94
RAB40C-205ENST00000539661 CCDC186Q7Z3E2 898 aa20.91■□□□□ 0.94
RAB40C-205ENST00000539661 JAKMIP1Q96N16 626 aaKnown RBP20.91■□□□□ 0.94
RAB40C-205ENST00000539661 TTC21AQ8NDW8 1320 aa20.9■□□□□ 0.94
RAB40C-205ENST00000539661 TDRD7Q8NHU6 1098 aaKnown RBP20.9■□□□□ 0.94
RAB40C-205ENST00000539661 SPG7Q9UQ90 795 aa20.9■□□□□ 0.94
RAB40C-205ENST00000539661 SCAND2PQ9GZW5 306 aaPredicted RBP20.9■□□□□ 0.94
RAB40C-205ENST00000539661 CTNNA3Q9UI47 895 aa20.9■□□□□ 0.94
RAB40C-205ENST00000539661 SBNO1A3KN83 1393 aa20.89■□□□□ 0.94
RAB40C-205ENST00000539661 IGSF1Q8N6C5 1336 aa20.89■□□□□ 0.94
RAB40C-205ENST00000539661 CAVIN2O95810 425 aa20.89■□□□□ 0.93
RAB40C-205ENST00000539661 ZNF75DP51815 510 aa20.89■□□□□ 0.93
RAB40C-205ENST00000539661 TNMDQ9H2S6 317 aa20.89■□□□□ 0.93
RAB40C-205ENST00000539661 CBX8Q9HC52 389 aa20.89■□□□□ 0.93
RAB40C-205ENST00000539661 FLT4P35916 1363 aa20.89■□□□□ 0.93
RAB40C-205ENST00000539661 ST3GAL1Q11201 340 aa20.89■□□□□ 0.93
RAB40C-205ENST00000539661 LARP1BQ659C4 914 aaKnown RBP20.89■□□□□ 0.93
RAB40C-205ENST00000539661 LUZP1Q86V48 1076 aa20.89■□□□□ 0.93
RAB40C-205ENST00000539661 TMEM2Q9UHN6 1383 aa20.88■□□□□ 0.93
RAB40C-205ENST00000539661 ACEP12821 1306 aa20.88■□□□□ 0.93
RAB40C-205ENST00000539661 CPA1P15085 419 aa20.88■□□□□ 0.93
RAB40C-205ENST00000539661 ZSCAN25Q6NSZ9 544 aa20.88■□□□□ 0.93
RAB40C-205ENST00000539661 NPHP3Q7Z494 1330 aa20.88■□□□□ 0.93
RAB40C-205ENST00000539661 TNNT1P13805 278 aa20.88■□□□□ 0.93
RAB40C-205ENST00000539661 CDC25BP30305 580 aa20.88■□□□□ 0.93
RAB40C-205ENST00000539661 ME3Q16798 604 aa20.88■□□□□ 0.93
RAB40C-205ENST00000539661 SRGAP3O43295 1099 aa20.87■□□□□ 0.93
RAB40C-205ENST00000539661 ZKSCAN1P17029 563 aaPredicted RBP20.87■□□□□ 0.93
RAB40C-205ENST00000539661 LIG1P18858 919 aa20.87■□□□□ 0.93
RAB40C-205ENST00000539661 ANO6Q4KMQ2 910 aa20.87■□□□□ 0.93
RAB40C-205ENST00000539661 DRC7Q8IY82 874 aa20.87■□□□□ 0.93
RAB40C-205ENST00000539661 ADCK5Q3MIX3 580 aa20.87■□□□□ 0.93
RAB40C-205ENST00000539661 CCDC112Q8NEF3 446 aa20.87■□□□□ 0.93
RAB40C-205ENST00000539661 DDX41Q9UJV9 622 aaKnown RBP20.87■□□□□ 0.93
RAB40C-205ENST00000539661 GNAT3A8MTJ3 354 aa20.86■□□□□ 0.93
RAB40C-205ENST00000539661 NECTIN1Q15223 517 aa20.86■□□□□ 0.93
RAB40C-205ENST00000539661 PRPF40BQ6NWY9 871 aaKnown RBP20.86■□□□□ 0.93
RAB40C-205ENST00000539661 C16orf45Q96MC5 204 aaPredicted RBP20.86■□□□□ 0.93
RAB40C-205ENST00000539661 CLSTN2Q9H4D0 955 aa20.86■□□□□ 0.93
RAB40C-205ENST00000539661 TRIM5Q9C035 493 aa20.86■□□□□ 0.93
RAB40C-205ENST00000539661 PTH1RQ03431 593 aa20.85■□□□□ 0.93
RAB40C-205ENST00000539661 CEP170BQ9Y4F5 1589 aaPredicted RBP20.85■□□□□ 0.93
RAB40C-205ENST00000539661 GOLGA6L4A6NEF3 574 aa20.85■□□□□ 0.93
RAB40C-205ENST00000539661 PSMA5P28066 241 aa20.85■□□□□ 0.93
RAB40C-205ENST00000539661 DACT1Q9NYF0 836 aa20.85■□□□□ 0.93
RAB40C-205ENST00000539661 MORC2Q9Y6X9 1032 aaPredicted RBP20.85■□□□□ 0.93
RAB40C-205ENST00000539661 NEMFO60524 1076 aa20.84■□□□□ 0.93
RAB40C-205ENST00000539661 LRMPQ12912 555 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms