RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 LINS1Q8NG48 757 aa21.18■□□□□ 0.98
PCDHB17P-201ENST00000539533 APBB1O00213 710 aa21.17■□□□□ 0.98
PCDHB17P-201ENST00000539533 RBM42Q9BTD8 480 aaKnown RBP21.17■□□□□ 0.98
PCDHB17P-201ENST00000539533 IGKV5-2P06315 115 aa21.17■□□□□ 0.98
PCDHB17P-201ENST00000539533 VPS72Q15906 364 aa21.17■□□□□ 0.98
PCDHB17P-201ENST00000539533 ERBB4Q15303 1308 aa21.16■□□□□ 0.98
PCDHB17P-201ENST00000539533 C9orf78Q9NZ63 289 aaPredicted RBP21.16■□□□□ 0.98
PCDHB17P-201ENST00000539533 BECN1Q14457 450 aa21.16■□□□□ 0.98
PCDHB17P-201ENST00000539533 DNAJC10Q8IXB1 793 aa21.15■□□□□ 0.98
PCDHB17P-201ENST00000539533 ACSBG1Q96GR2 724 aa21.15■□□□□ 0.98
PCDHB17P-201ENST00000539533 MYD88Q99836 296 aa21.15■□□□□ 0.98
PCDHB17P-201ENST00000539533 METTL22Q9BUU2 404 aaPredicted RBP21.15■□□□□ 0.98
PCDHB17P-201ENST00000539533 USP21Q9UK80 565 aa21.15■□□□□ 0.98
PCDHB17P-201ENST00000539533 SMARCA5O60264 1052 aaPredicted RBP21.15■□□□□ 0.98
PCDHB17P-201ENST00000539533 DOT1LQ8TEK3 1739 aa21.14■□□□□ 0.97
PCDHB17P-201ENST00000539533 A0A0G2JS52 829 aa21.14■□□□□ 0.97
PCDHB17P-201ENST00000539533 C16orf71Q8IYS4 520 aaPredicted RBP21.14■□□□□ 0.97
PCDHB17P-201ENST00000539533 EXOC6BQ9Y2D4 811 aa21.14■□□□□ 0.97
PCDHB17P-201ENST00000539533 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.97
PCDHB17P-201ENST00000539533 TTLL7Q6ZT98 887 aa21.14■□□□□ 0.97
PCDHB17P-201ENST00000539533 PPP1R42Q7Z4L9 355 aa21.14■□□□□ 0.97
PCDHB17P-201ENST00000539533 VSIG10Q8N0Z9 540 aa21.14■□□□□ 0.97
PCDHB17P-201ENST00000539533 SLC4A9Q96Q91 983 aa21.14■□□□□ 0.97
PCDHB17P-201ENST00000539533 NEURL1BA8MQ27 555 aa21.12■□□□□ 0.97
PCDHB17P-201ENST00000539533 PLBD2Q8NHP8 589 aa21.12■□□□□ 0.97
PCDHB17P-201ENST00000539533 GRM8O00222 908 aa21.11■□□□□ 0.97
PCDHB17P-201ENST00000539533 SSH3Q8TE77 659 aa21.11■□□□□ 0.97
PCDHB17P-201ENST00000539533 TEX13AQ9BXU3 409 aaPredicted RBP21.11■□□□□ 0.97
PCDHB17P-201ENST00000539533 SRGAP3O43295 1099 aa21.1■□□□□ 0.97
PCDHB17P-201ENST00000539533 MEX3CQ5U5Q3 659 aaKnown RBP21.1■□□□□ 0.97
PCDHB17P-201ENST00000539533 ATP5J2-PTCD1G3V325 749 aa21.1■□□□□ 0.97
PCDHB17P-201ENST00000539533 GCKRQ14397 625 aa21.1■□□□□ 0.97
PCDHB17P-201ENST00000539533 OTUD7AQ8TE49 926 aaPredicted RBP21.1■□□□□ 0.97
PCDHB17P-201ENST00000539533 POLA2Q14181 598 aa21.09■□□□□ 0.97
PCDHB17P-201ENST00000539533 UTYO14607 1347 aa21.09■□□□□ 0.97
PCDHB17P-201ENST00000539533 STARD3NLO95772 234 aa21.09■□□□□ 0.97
PCDHB17P-201ENST00000539533 PLEKHM2Q8IWE5 1019 aa21.09■□□□□ 0.97
PCDHB17P-201ENST00000539533 KAZALD1Q96I82 304 aa21.09■□□□□ 0.97
PCDHB17P-201ENST00000539533 ZNF330Q9Y3S2 320 aaPredicted RBP21.09■□□□□ 0.97
PCDHB17P-201ENST00000539533 ARFGEF2Q9Y6D5 1785 aa21.09■□□□□ 0.97
PCDHB17P-201ENST00000539533 SUCLG2Q96I99 432 aa21.08■□□□□ 0.97
PCDHB17P-201ENST00000539533 UPF2Q9HAU5 1272 aaKnown RBP21.08■□□□□ 0.97
PCDHB17P-201ENST00000539533 SLKQ9H2G2 1235 aaPredicted RBP21.08■□□□□ 0.96
PCDHB17P-201ENST00000539533 ZBTB3Q9H5J0 574 aa21.08■□□□□ 0.96
PCDHB17P-201ENST00000539533 JARID2Q92833 1246 aaPredicted RBP21.07■□□□□ 0.96
PCDHB17P-201ENST00000539533 TBC1D32Q96NH3 1257 aa21.07■□□□□ 0.96
PCDHB17P-201ENST00000539533 KCNQ2O43526 872 aa21.07■□□□□ 0.96
PCDHB17P-201ENST00000539533 IBTKQ9P2D0 1353 aaPredicted RBP21.06■□□□□ 0.96
PCDHB17P-201ENST00000539533 CYP19A1P11511 503 aaPredicted RBP21.06■□□□□ 0.96
PCDHB17P-201ENST00000539533 FAM43AQ8N2R8 423 aa21.06■□□□□ 0.96
PCDHB17P-201ENST00000539533 SURF6O75683 361 aaKnown RBP21.05■□□□□ 0.96
PCDHB17P-201ENST00000539533 MTX1Q13505 466 aa21.05■□□□□ 0.96
PCDHB17P-201ENST00000539533 BMP2KLQ5H9B9 411 aa21.05■□□□□ 0.96
PCDHB17P-201ENST00000539533 LRRCC1Q9C099 1032 aa21.05■□□□□ 0.96
PCDHB17P-201ENST00000539533 BICC1Q9H694 974 aaKnown RBP21.05■□□□□ 0.96
PCDHB17P-201ENST00000539533 ANTXR1Q9H6X2 564 aa21.05■□□□□ 0.96
PCDHB17P-201ENST00000539533 AFF2P51816 1311 aa21.05■□□□□ 0.96
PCDHB17P-201ENST00000539533 HDAC5Q9UQL6 1122 aa21.04■□□□□ 0.96
PCDHB17P-201ENST00000539533 AFDNP55196 1824 aaKnown RBP21.03■□□□□ 0.96
PCDHB17P-201ENST00000539533 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.03■□□□□ 0.96
PCDHB17P-201ENST00000539533 NUP188Q5SRE5 1749 aa21.03■□□□□ 0.96
PCDHB17P-201ENST00000539533 A0A087WZG4 1122 aa21.02■□□□□ 0.96
PCDHB17P-201ENST00000539533 EPHA10Q5JZY3 1008 aa21.02■□□□□ 0.96
PCDHB17P-201ENST00000539533 UBE3BQ7Z3V4 1068 aa21.02■□□□□ 0.96
PCDHB17P-201ENST00000539533 ARXQ96QS3 562 aa21.02■□□□□ 0.96
PCDHB17P-201ENST00000539533 ZBTB1Q9Y2K1 713 aa21.02■□□□□ 0.96
PCDHB17P-201ENST00000539533 GSPT1P15170 499 aaKnown RBP21.02■□□□□ 0.96
PCDHB17P-201ENST00000539533 GJD4Q96KN9 370 aaPredicted RBP21.02■□□□□ 0.96
PCDHB17P-201ENST00000539533 TBC1D2Q9BYX2 928 aa21.01■□□□□ 0.95
PCDHB17P-201ENST00000539533 IL1RAPL2Q9NP60 686 aa21.01■□□□□ 0.95
PCDHB17P-201ENST00000539533 TJP1Q07157 1748 aa21.01■□□□□ 0.95
PCDHB17P-201ENST00000539533 ATP6V1AP38606 617 aa21■□□□□ 0.95
PCDHB17P-201ENST00000539533 FAM182BQ5T319 152 aa21■□□□□ 0.95
PCDHB17P-201ENST00000539533 PA2G4Q9UQ80 394 aaKnown RBP21■□□□□ 0.95
PCDHB17P-201ENST00000539533 LOC102724428A0A0B4J2F2 783 aa21■□□□□ 0.95
PCDHB17P-201ENST00000539533 SIK1P57059 783 aa21■□□□□ 0.95
PCDHB17P-201ENST00000539533 TTC22Q5TAA0 569 aa21■□□□□ 0.95
PCDHB17P-201ENST00000539533 RAB11FIP3O75154 756 aa20.99■□□□□ 0.95
PCDHB17P-201ENST00000539533 CASP7P55210 303 aa20.99■□□□□ 0.95
PCDHB17P-201ENST00000539533 PTF1AQ7RTS3 328 aa20.99■□□□□ 0.95
PCDHB17P-201ENST00000539533 RHPN1Q8TCX5 695 aa20.99■□□□□ 0.95
PCDHB17P-201ENST00000539533 CWC25Q9NXE8 425 aaPredicted RBP20.99■□□□□ 0.95
PCDHB17P-201ENST00000539533 PALLDQ8WX93 1383 aa20.98■□□□□ 0.95
PCDHB17P-201ENST00000539533 PDE1AP54750 535 aa20.98■□□□□ 0.95
PCDHB17P-201ENST00000539533 KIF6Q6ZMV9 814 aa20.98■□□□□ 0.95
PCDHB17P-201ENST00000539533 THSD7AQ9UPZ6 1657 aa20.97■□□□□ 0.95
PCDHB17P-201ENST00000539533 H7C1W4 665 aa20.97■□□□□ 0.95
PCDHB17P-201ENST00000539533 TCIRG1Q13488 830 aa20.97■□□□□ 0.95
PCDHB17P-201ENST00000539533 ITPK1Q13572 414 aa20.97■□□□□ 0.95
PCDHB17P-201ENST00000539533 TSHZ3Q63HK5 1081 aa20.97■□□□□ 0.95
PCDHB17P-201ENST00000539533 SALL3Q9BXA9 1300 aa20.97■□□□□ 0.95
PCDHB17P-201ENST00000539533 CCDC191Q8NCU4 936 aa20.96■□□□□ 0.95
PCDHB17P-201ENST00000539533 KIF1BPQ96EK5 621 aa20.96■□□□□ 0.95
PCDHB17P-201ENST00000539533 ISCA1Q9BUE6 129 aa20.96■□□□□ 0.95
PCDHB17P-201ENST00000539533 MAP3K15Q6ZN16 1313 aa20.96■□□□□ 0.95
PCDHB17P-201ENST00000539533 OS9Q13438 667 aaPredicted RBP20.95■□□□□ 0.94
PCDHB17P-201ENST00000539533 HLFQ16534 295 aa20.95■□□□□ 0.94
PCDHB17P-201ENST00000539533 HSP90AB4PQ58FF6 505 aa20.95■□□□□ 0.94
PCDHB17P-201ENST00000539533 INTS5Q6P9B9 1019 aaKnown RBP20.95■□□□□ 0.94
PCDHB17P-201ENST00000539533 OSBPL3Q9H4L5 887 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms