RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 EDEM1Q92611 657 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 IFT43Q96FT9 208 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 RBCK1Q9BYM8 510 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 RNF19AQ9NV58 838 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 BRPF3Q9ULD4 1205 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 POLIQ9UNA4 740 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 USP20Q9Y2K6 914 aa5.31□□□□□ -1.56
SNHG1-210ENST00000539303 A6NHS1 94 aa5.3□□□□□ -1.56
SNHG1-210ENST00000539303 NDUFB5O43674 189 aa5.3□□□□□ -1.56
SNHG1-210ENST00000539303 ERCC3P19447 782 aa5.3□□□□□ -1.56
SNHG1-210ENST00000539303 GTF2E1P29083 439 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-210ENST00000539303 ZAP70P43403 619 aa5.3□□□□□ -1.56
SNHG1-210ENST00000539303 DNM1Q05193 864 aaKnown RBP5.3□□□□□ -1.56
SNHG1-210ENST00000539303 NBPF10Q6P3W6 841 aaKnown RBP5.3□□□□□ -1.56
SNHG1-210ENST00000539303 TREML1Q86YW5 311 aa5.3□□□□□ -1.56
SNHG1-210ENST00000539303 RHPN1Q8TCX5 695 aa5.3□□□□□ -1.56
SNHG1-210ENST00000539303 TMC1Q8TDI8 760 aa5.3□□□□□ -1.56
SNHG1-210ENST00000539303 SETDB2Q96T68 719 aa5.3□□□□□ -1.56
SNHG1-210ENST00000539303 SPATA31C2B4DYI2 1134 aa5.29□□□□□ -1.56
SNHG1-210ENST00000539303 E9PSI1 815 aa5.29□□□□□ -1.56
SNHG1-210ENST00000539303 UPP2O95045 317 aa5.29□□□□□ -1.56
SNHG1-210ENST00000539303 AVPP01185 164 aa5.29□□□□□ -1.56
SNHG1-210ENST00000539303 C1orf53Q5VUE5 145 aa5.29□□□□□ -1.56
SNHG1-210ENST00000539303 ZSCAN29Q8IWY8 852 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-210ENST00000539303 ABTB2Q8N961 1025 aa5.29□□□□□ -1.56
SNHG1-210ENST00000539303 GPR152Q8TDT2 470 aa5.29□□□□□ -1.56
SNHG1-210ENST00000539303 MRRFQ96E11 262 aaKnown RBP5.29□□□□□ -1.56
SNHG1-210ENST00000539303 SOS2Q07890 1332 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-210ENST00000539303 TTLL8A6PVC2 850 aa5.28□□□□□ -1.56
SNHG1-210ENST00000539303 SOBPA7XYQ1 873 aa5.28□□□□□ -1.56
SNHG1-210ENST00000539303 ST8SIA5O15466 376 aa5.28□□□□□ -1.56
SNHG1-210ENST00000539303 TREHO43280 583 aa5.28□□□□□ -1.56
SNHG1-210ENST00000539303 PDGFAP04085 211 aa5.28□□□□□ -1.56
SNHG1-210ENST00000539303 ALKBH2Q6NS38 261 aa5.28□□□□□ -1.56
SNHG1-210ENST00000539303 LYSMD3Q7Z3D4 306 aa5.28□□□□□ -1.56
SNHG1-210ENST00000539303 SUSD3Q96L08 255 aa5.28□□□□□ -1.56
SNHG1-210ENST00000539303 ZFP42Q96MM3 310 aa5.28□□□□□ -1.56
SNHG1-210ENST00000539303 FAM129BQ96TA1 746 aa5.28□□□□□ -1.56
SNHG1-210ENST00000539303 DNMT3LQ9UJW3 386 aa5.28□□□□□ -1.56
SNHG1-210ENST00000539303 WWC3Q9ULE0 1092 aa5.28□□□□□ -1.56
SNHG1-210ENST00000539303 OPLAHO14841 1288 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 MICAL2O94851 1124 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 MSX1P28360 303 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 GRNP28799 593 aaKnown RBP5.27□□□□□ -1.57
SNHG1-210ENST00000539303 MAPK8P45983 427 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 FMR1Q06787 632 aaKnown RBP eCLIP5.27□□□□□ -1.57
SNHG1-210ENST00000539303 DSC3Q14574 896 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 NBPF1Q3BBV0 1214 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 BICDL1Q6ZP65 573 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 GJD3Q8N144 294 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 NUDT16Q96DE0 195 aaKnown RBP5.27□□□□□ -1.57
SNHG1-210ENST00000539303 NIF3L1Q9GZT8 377 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 GGNBP2Q9H3C7 697 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 RUBCNLQ9H714 662 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 GPAMQ9HCL2 828 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 ZDHHC3Q9NYG2 299 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 DMGDHQ9UI17 866 aaKnown RBP5.27□□□□□ -1.57
SNHG1-210ENST00000539303 DACH1Q9UI36 760 aa5.27□□□□□ -1.57
SNHG1-210ENST00000539303 TGFBR3LH3BV60 316 aa5.26□□□□□ -1.57
SNHG1-210ENST00000539303 MZF1P28698 734 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-210ENST00000539303 IDH3AP50213 366 aa5.26□□□□□ -1.57
SNHG1-210ENST00000539303 EHHADHQ08426 723 aa5.26□□□□□ -1.57
SNHG1-210ENST00000539303 TRIP4Q15650 581 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-210ENST00000539303 EAPPQ56P03 285 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-210ENST00000539303 LRRC69Q6ZNQ3 347 aa5.26□□□□□ -1.57
SNHG1-210ENST00000539303 FAM161BQ96MY7 647 aa5.26□□□□□ -1.57
SNHG1-210ENST00000539303 ZIC5Q96T25 663 aa5.26□□□□□ -1.57
SNHG1-210ENST00000539303 TIMMDC1Q9NPL8 285 aa5.26□□□□□ -1.57
SNHG1-210ENST00000539303 GFRA3O60609 400 aa5.25□□□□□ -1.57
SNHG1-210ENST00000539303 THBS1P07996 1170 aa5.25□□□□□ -1.57
SNHG1-210ENST00000539303 TATP17735 454 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-210ENST00000539303 ORC1Q13415 861 aa5.25□□□□□ -1.57
SNHG1-210ENST00000539303 SCARF1Q14162 830 aa5.25□□□□□ -1.57
SNHG1-210ENST00000539303 C8orf34Q49A92 452 aa5.25□□□□□ -1.57
SNHG1-210ENST00000539303 ARSJQ5FYB0 599 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-210ENST00000539303 SENP3-EIF4A1A0A087X0R7 540 aa5.24□□□□□ -1.57
SNHG1-210ENST00000539303 A0A1W2PNR3 127 aa5.24□□□□□ -1.57
SNHG1-210ENST00000539303 NRG2O14511 850 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-210ENST00000539303 AXIN1O15169 862 aa5.24□□□□□ -1.57
SNHG1-210ENST00000539303 LAPTM4AQ15012 233 aa5.24□□□□□ -1.57
SNHG1-210ENST00000539303 PKDCCQ504Y2 493 aa5.24□□□□□ -1.57
SNHG1-210ENST00000539303 BTLAQ7Z6A9 289 aa5.24□□□□□ -1.57
SNHG1-210ENST00000539303 CITED4Q96RK1 184 aa5.24□□□□□ -1.57
SNHG1-210ENST00000539303 GAS2L1Q99501 681 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-210ENST00000539303 IGSF5Q9NSI5 407 aa5.24□□□□□ -1.57
SNHG1-210ENST00000539303 PNMA6FA0A0J9YX94 578 aa5.23□□□□□ -1.57
SNHG1-210ENST00000539303 A0A1B0GTH6 734 aa5.23□□□□□ -1.57
SNHG1-210ENST00000539303 DGAT1O75907 488 aa5.23□□□□□ -1.57
SNHG1-210ENST00000539303 RECKO95980 971 aa5.23□□□□□ -1.57
SNHG1-210ENST00000539303 LDHBP07195 334 aaKnown RBP5.23□□□□□ -1.57
SNHG1-210ENST00000539303 INPP5BP32019 993 aa5.23□□□□□ -1.57
SNHG1-210ENST00000539303 SMCPP49901 116 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-210ENST00000539303 PLCB3Q01970 1234 aa5.23□□□□□ -1.57
SNHG1-210ENST00000539303 ZNF326Q5BKZ1 582 aaKnown RBP5.23□□□□□ -1.57
SNHG1-210ENST00000539303 USPL1Q5W0Q7 1092 aa5.23□□□□□ -1.57
SNHG1-210ENST00000539303 DMRTB1Q96MA1 342 aa5.23□□□□□ -1.57
SNHG1-210ENST00000539303 CFHR5Q9BXR6 569 aa5.23□□□□□ -1.57
SNHG1-210ENST00000539303 AAASQ9NRG9 546 aa5.23□□□□□ -1.57
SNHG1-210ENST00000539303 FOXD3Q9UJU5 478 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-210ENST00000539303 TYRO3Q06418 890 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms