RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 ATP6V1AP38606 617 aa26.11■■□□□ 1.77
COPS7A-208ENST00000538410 FLAD1Q8NFF5 587 aa26.11■■□□□ 1.77
COPS7A-208ENST00000538410 FHDC1Q9C0D6 1143 aaPredicted RBP26.1■■□□□ 1.77
COPS7A-208ENST00000538410 PPP4R2Q9NY27 417 aa26.1■■□□□ 1.77
COPS7A-208ENST00000538410 COL5A3P25940 1745 aaPredicted RBP26.1■■□□□ 1.77
COPS7A-208ENST00000538410 DCAF8L1A6NGE4 600 aa26.09■■□□□ 1.77
COPS7A-208ENST00000538410 STARD3NLO95772 234 aa26.09■■□□□ 1.77
COPS7A-208ENST00000538410 MYL6BP14649 208 aa26.09■■□□□ 1.77
COPS7A-208ENST00000538410 LINC00116Q8NCU8 138 aa26.09■■□□□ 1.77
COPS7A-208ENST00000538410 UBR3Q6ZT12 1888 aa26.08■■□□□ 1.77
COPS7A-208ENST00000538410 ITPK1Q13572 414 aa26.08■■□□□ 1.77
COPS7A-208ENST00000538410 LRP10Q7Z4F1 713 aa26.08■■□□□ 1.77
COPS7A-208ENST00000538410 ITPRIPQ8IWB1 547 aa26.08■■□□□ 1.77
COPS7A-208ENST00000538410 SYT17Q9BSW7 474 aa26.08■■□□□ 1.77
COPS7A-208ENST00000538410 NBPF26B4DH59 902 aa26.07■■□□□ 1.76
COPS7A-208ENST00000538410 A1BGP04217 495 aa26.07■■□□□ 1.76
COPS7A-208ENST00000538410 NBPF10Q6P3W6 841 aaKnown RBP26.07■■□□□ 1.76
COPS7A-208ENST00000538410 NBPF15Q8N660 670 aa26.07■■□□□ 1.76
COPS7A-208ENST00000538410 F6X3S4 739 aa26.06■■□□□ 1.76
COPS7A-208ENST00000538410 PIP4K2AP48426 406 aaPredicted RBP26.06■■□□□ 1.76
COPS7A-208ENST00000538410 DDX19BQ9UMR2 479 aa26.06■■□□□ 1.76
COPS7A-208ENST00000538410 PXDNLA1KZ92 1463 aa26.06■■□□□ 1.76
COPS7A-208ENST00000538410 CYP19A1P11511 503 aaPredicted RBP26.06■■□□□ 1.76
COPS7A-208ENST00000538410 INTS3Q68E01 1043 aaKnown RBP26.06■■□□□ 1.76
COPS7A-208ENST00000538410 ARFGEF2Q9Y6D5 1785 aa26.04■■□□□ 1.76
COPS7A-208ENST00000538410 MYH14Q7Z406 1995 aaKnown RBP26.04■■□□□ 1.76
COPS7A-208ENST00000538410 PHF14O94880 888 aa26.03■■□□□ 1.76
COPS7A-208ENST00000538410 AAMPQ13685 434 aa26.03■■□□□ 1.76
COPS7A-208ENST00000538410 XAGE3Q8WTP9 111 aa26.03■■□□□ 1.76
COPS7A-208ENST00000538410 ADCY9O60503 1353 aa26.03■■□□□ 1.76
COPS7A-208ENST00000538410 PI4KAP2A4QPH2 592 aa26.03■■□□□ 1.76
COPS7A-208ENST00000538410 DDX58O95786 925 aaKnown RBP26.03■■□□□ 1.76
COPS7A-208ENST00000538410 AIMP1Q12904 312 aaKnown RBP26.03■■□□□ 1.76
COPS7A-208ENST00000538410 SLC4A10Q6U841 1118 aa26.03■■□□□ 1.76
COPS7A-208ENST00000538410 KSR2Q6VAB6 950 aa26.03■■□□□ 1.76
COPS7A-208ENST00000538410 COPS6Q7L5N1 327 aa26.03■■□□□ 1.76
COPS7A-208ENST00000538410 AMIGO3Q86WK7 504 aa26.03■■□□□ 1.76
COPS7A-208ENST00000538410 PI4KAP1Q8N8J0 262 aa26.03■■□□□ 1.76
COPS7A-208ENST00000538410 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.02■■□□□ 1.76
COPS7A-208ENST00000538410 SSFA2P28290 1259 aa26.02■■□□□ 1.76
COPS7A-208ENST00000538410 CCT4P50991 539 aaKnown RBP26.02■■□□□ 1.76
COPS7A-208ENST00000538410 MSL1Q68DK7 614 aa26.02■■□□□ 1.76
COPS7A-208ENST00000538410 GNPATO15228 680 aa26.01■■□□□ 1.75
COPS7A-208ENST00000538410 DNAAF4Q8WXU2 420 aa26.01■■□□□ 1.75
COPS7A-208ENST00000538410 SMIM5Q71RC9 77 aa26■■□□□ 1.75
COPS7A-208ENST00000538410 KLHL34Q8N239 644 aa26■■□□□ 1.75
COPS7A-208ENST00000538410 ZBTB7BO15156 539 aaPredicted RBP25.99■■□□□ 1.75
COPS7A-208ENST00000538410 CHMP4BQ9H444 224 aaKnown RBP25.99■■□□□ 1.75
COPS7A-208ENST00000538410 MAP3K2Q9Y2U5 619 aa25.99■■□□□ 1.75
COPS7A-208ENST00000538410 ATP10DQ9P241 1426 aa25.97■■□□□ 1.75
COPS7A-208ENST00000538410 ANKRD13DQ6ZTN6 518 aa25.97■■□□□ 1.75
COPS7A-208ENST00000538410 ZBTB1Q9Y2K1 713 aa25.97■■□□□ 1.75
COPS7A-208ENST00000538410 AFDNP55196 1824 aaKnown RBP25.97■■□□□ 1.75
COPS7A-208ENST00000538410 RC3H1Q5TC82 1133 aaKnown RBP25.96■■□□□ 1.75
COPS7A-208ENST00000538410 B4GALNT3Q6L9W6 998 aa25.96■■□□□ 1.75
COPS7A-208ENST00000538410 RIC3Q7Z5B4 369 aa25.96■■□□□ 1.75
COPS7A-208ENST00000538410 CCDC136Q96JN2 1154 aa25.96■■□□□ 1.75
COPS7A-208ENST00000538410 ZBTB40Q9NUA8 1239 aa25.96■■□□□ 1.75
COPS7A-208ENST00000538410 CCDC87Q9NVE4 849 aa25.96■■□□□ 1.75
COPS7A-208ENST00000538410 CRKLP46109 303 aaKnown RBP25.96■■□□□ 1.75
COPS7A-208ENST00000538410 INTS5Q6P9B9 1019 aaKnown RBP25.96■■□□□ 1.75
COPS7A-208ENST00000538410 RTCBQ9Y3I0 505 aaKnown RBP25.96■■□□□ 1.75
COPS7A-208ENST00000538410 CNTNAP4Q9C0A0 1308 aa25.95■■□□□ 1.74
COPS7A-208ENST00000538410 IL6STP40189 918 aaPredicted RBP25.94■■□□□ 1.74
COPS7A-208ENST00000538410 BEND3Q5T5X7 828 aa25.94■■□□□ 1.74
COPS7A-208ENST00000538410 TTLL7Q6ZT98 887 aa25.94■■□□□ 1.74
COPS7A-208ENST00000538410 PLBD2Q8NHP8 589 aa25.94■■□□□ 1.74
COPS7A-208ENST00000538410 SRCIN1Q9C0H9 1055 aa25.94■■□□□ 1.74
COPS7A-208ENST00000538410 TRAPPC3LQ5T215 181 aa25.93■■□□□ 1.74
COPS7A-208ENST00000538410 ZNF330Q9Y3S2 320 aaPredicted RBP25.92■■□□□ 1.74
COPS7A-208ENST00000538410 METTL22Q9BUU2 404 aaPredicted RBP25.92■■□□□ 1.74
COPS7A-208ENST00000538410 NUP98P52948 1817 aa25.91■■□□□ 1.74
COPS7A-208ENST00000538410 RPS6KA4O75676 772 aa25.91■■□□□ 1.74
COPS7A-208ENST00000538410 ANKRD36CQ5JPF3 1778 aa25.9■■□□□ 1.74
COPS7A-208ENST00000538410 ALDH1L1O75891 902 aa25.89■■□□□ 1.74
COPS7A-208ENST00000538410 ADRA2BP18089 450 aa25.89■■□□□ 1.74
COPS7A-208ENST00000538410 EIF5P55010 431 aaKnown RBP25.89■■□□□ 1.74
COPS7A-208ENST00000538410 LINS1Q8NG48 757 aa25.89■■□□□ 1.74
COPS7A-208ENST00000538410 MEIS3Q99687 375 aa25.89■■□□□ 1.74
COPS7A-208ENST00000538410 PCDHB15Q9Y5E8 787 aa25.89■■□□□ 1.74
COPS7A-208ENST00000538410 NEXNQ0ZGT2 675 aa25.88■■□□□ 1.73
COPS7A-208ENST00000538410 KIF6Q6ZMV9 814 aa25.88■■□□□ 1.73
COPS7A-208ENST00000538410 NPM2Q86SE8 214 aaKnown RBP25.88■■□□□ 1.73
COPS7A-208ENST00000538410 NLGN2Q8NFZ4 835 aa25.88■■□□□ 1.73
COPS7A-208ENST00000538410 ARHGEF1Q92888 912 aaKnown RBP25.88■■□□□ 1.73
COPS7A-208ENST00000538410 MYD88Q99836 296 aa25.88■■□□□ 1.73
COPS7A-208ENST00000538410 ZBTB3Q9H5J0 574 aa25.88■■□□□ 1.73
COPS7A-208ENST00000538410 IBTKQ9P2D0 1353 aaPredicted RBP25.86■■□□□ 1.73
COPS7A-208ENST00000538410 IGKV5-2P06315 115 aa25.86■■□□□ 1.73
COPS7A-208ENST00000538410 YY1P25490 414 aa25.86■■□□□ 1.73
COPS7A-208ENST00000538410 RFC4P35249 363 aa25.86■■□□□ 1.73
COPS7A-208ENST00000538410 MAP3K15Q6ZN16 1313 aa25.86■■□□□ 1.73
COPS7A-208ENST00000538410 BCORQ6W2J9 1755 aa25.86■■□□□ 1.73
COPS7A-208ENST00000538410 GNAI3P08754 354 aa25.85■■□□□ 1.73
COPS7A-208ENST00000538410 GPR162Q16538 588 aa25.85■■□□□ 1.73
COPS7A-208ENST00000538410 CWF19L2Q2TBE0 894 aaKnown RBP25.85■■□□□ 1.73
COPS7A-208ENST00000538410 USP44Q9H0E7 712 aa25.85■■□□□ 1.73
COPS7A-208ENST00000538410 CD2APQ9Y5K6 639 aa25.85■■□□□ 1.73
COPS7A-208ENST00000538410 DZIP3Q86Y13 1208 aaKnown RBP25.84■■□□□ 1.73
COPS7A-208ENST00000538410 C1orf115Q9H7X2 142 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms