RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 U2SURPO15042 1029 aaKnown RBP13.74□□□□□ -0.21
VPS37C-204ENST00000538036 NPR1P16066 1061 aa13.74□□□□□ -0.21
VPS37C-204ENST00000538036 CCDC93Q567U6 631 aa13.74□□□□□ -0.21
VPS37C-204ENST00000538036 CC2D1BQ5T0F9 858 aaKnown RBP13.74□□□□□ -0.21
VPS37C-204ENST00000538036 C7orf43Q8WVR3 580 aa13.74□□□□□ -0.21
VPS37C-204ENST00000538036 PRDM10Q9NQV6 1147 aa13.74□□□□□ -0.21
VPS37C-204ENST00000538036 MKRN1Q9UHC7 482 aaKnown RBP13.74□□□□□ -0.21
VPS37C-204ENST00000538036 ZNF652Q9Y2D9 606 aa13.74□□□□□ -0.21
VPS37C-204ENST00000538036 FER1L6Q2WGJ9 1857 aa13.74□□□□□ -0.21
VPS37C-204ENST00000538036 CCDC88AQ3V6T2 1871 aa13.74□□□□□ -0.21
VPS37C-204ENST00000538036 CNTNAP1P78357 1384 aa13.73□□□□□ -0.21
VPS37C-204ENST00000538036 PASKQ96RG2 1323 aa13.73□□□□□ -0.21
VPS37C-204ENST00000538036 KLRG2A4D1S0 409 aaPredicted RBP13.73□□□□□ -0.21
VPS37C-204ENST00000538036 TPTE2Q6XPS3 522 aa13.73□□□□□ -0.21
VPS37C-204ENST00000538036 NBPF5PQ86XG9 351 aaPredicted RBP13.73□□□□□ -0.21
VPS37C-204ENST00000538036 TAF1DQ9H5J8 278 aaPredicted RBP13.73□□□□□ -0.21
VPS37C-204ENST00000538036 ANKRD31Q8N7Z5 1873 aa13.73□□□□□ -0.21
VPS37C-204ENST00000538036 SCN7AQ01118 1682 aa13.72□□□□□ -0.21
VPS37C-204ENST00000538036 DICER1Q9UPY3 1922 aaKnown RBP13.72□□□□□ -0.21
VPS37C-204ENST00000538036 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
VPS37C-204ENST00000538036 POTEJP0CG39 1038 aa13.72□□□□□ -0.21
VPS37C-204ENST00000538036 FKBP4Q02790 459 aaKnown RBP eCLIP13.72□□□□□ -0.21
VPS37C-204ENST00000538036 RTKN2Q8IZC4 609 aa13.72□□□□□ -0.21
VPS37C-204ENST00000538036 TMEM88BA6NKF7 163 aa13.71□□□□□ -0.21
VPS37C-204ENST00000538036 SNRPA1P09661 255 aaKnown RBP13.71□□□□□ -0.21
VPS37C-204ENST00000538036 PNMA8AQ86V59 439 aaPredicted RBP13.71□□□□□ -0.21
VPS37C-204ENST00000538036 AIDAQ96BJ3 306 aa13.71□□□□□ -0.21
VPS37C-204ENST00000538036 USP16Q9Y5T5 823 aa13.71□□□□□ -0.21
VPS37C-204ENST00000538036 VIRMAQ69YN4 1812 aaKnown RBP13.71□□□□□ -0.22
VPS37C-204ENST00000538036 COL3A1P02461 1466 aaPredicted RBP13.7□□□□□ -0.22
VPS37C-204ENST00000538036 ITGBL1O95965 494 aaPredicted RBP13.7□□□□□ -0.22
VPS37C-204ENST00000538036 ALDH1B1P30837 517 aa13.7□□□□□ -0.22
VPS37C-204ENST00000538036 CTCFP49711 727 aaPredicted RBP13.7□□□□□ -0.22
VPS37C-204ENST00000538036 HACL1Q9UJ83 578 aa13.7□□□□□ -0.22
VPS37C-204ENST00000538036 FOXN1O15353 648 aa13.69□□□□□ -0.22
VPS37C-204ENST00000538036 KCNQ3O43525 872 aa13.69□□□□□ -0.22
VPS37C-204ENST00000538036 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
VPS37C-204ENST00000538036 RTF1Q92541 710 aaKnown RBP13.69□□□□□ -0.22
VPS37C-204ENST00000538036 CFAP53Q96M91 514 aa13.69□□□□□ -0.22
VPS37C-204ENST00000538036 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
VPS37C-204ENST00000538036 COL11A2P13942 1736 aaPredicted RBP13.69□□□□□ -0.22
VPS37C-204ENST00000538036 SLX4Q8IY92 1834 aa13.69□□□□□ -0.22
VPS37C-204ENST00000538036 PRKAR2BP31323 418 aa13.68□□□□□ -0.22
VPS37C-204ENST00000538036 VEGFBP49765 207 aa13.68□□□□□ -0.22
VPS37C-204ENST00000538036 PHACTR3Q96KR7 559 aa13.68□□□□□ -0.22
VPS37C-204ENST00000538036 RSPH6AQ9H0K4 717 aa13.68□□□□□ -0.22
VPS37C-204ENST00000538036 NIP7Q9Y221 180 aaKnown RBP eCLIP13.68□□□□□ -0.22
VPS37C-204ENST00000538036 SCN4AP35499 1836 aa13.67□□□□□ -0.22
VPS37C-204ENST00000538036 FZD9O00144 591 aa13.67□□□□□ -0.22
VPS37C-204ENST00000538036 HTATSF1O43719 755 aaKnown RBP13.67□□□□□ -0.22
VPS37C-204ENST00000538036 EPHX2P34913 555 aa13.67□□□□□ -0.22
VPS37C-204ENST00000538036 GRIPAP1Q4V328 841 aa13.67□□□□□ -0.22
VPS37C-204ENST00000538036 EAPPQ56P03 285 aaPredicted RBP13.67□□□□□ -0.22
VPS37C-204ENST00000538036 CC2D2BQ6DHV5 1058 aa13.67□□□□□ -0.22
VPS37C-204ENST00000538036 GPC2Q8N158 579 aa13.67□□□□□ -0.22
VPS37C-204ENST00000538036 ZNF277Q9NRM2 450 aaPredicted RBP13.67□□□□□ -0.22
VPS37C-204ENST00000538036 WBP1LQ9NX94 342 aa13.67□□□□□ -0.22
VPS37C-204ENST00000538036 CLEC11AQ9Y240 323 aa13.67□□□□□ -0.22
VPS37C-204ENST00000538036 SIPA1L3O60292 1781 aaPredicted RBP13.67□□□□□ -0.22
VPS37C-204ENST00000538036 RASSF10A6NK89 507 aa13.66□□□□□ -0.22
VPS37C-204ENST00000538036 GTF2E1P29083 439 aaPredicted RBP13.66□□□□□ -0.22
VPS37C-204ENST00000538036 IARSP41252 1262 aaKnown RBP13.66□□□□□ -0.22
VPS37C-204ENST00000538036 CNTROBQ8N137 903 aa13.66□□□□□ -0.22
VPS37C-204ENST00000538036 JDP2Q8WYK2 163 aa13.66□□□□□ -0.22
VPS37C-204ENST00000538036 PSMD1Q99460 953 aa13.66□□□□□ -0.22
VPS37C-204ENST00000538036 ARFGEF2Q9Y6D5 1785 aa13.66□□□□□ -0.22
VPS37C-204ENST00000538036 ZNF541Q9H0D2 1346 aa13.65□□□□□ -0.22
VPS37C-204ENST00000538036 NBPF26B4DH59 902 aa13.65□□□□□ -0.22
VPS37C-204ENST00000538036 PIP4K2AP48426 406 aaPredicted RBP13.65□□□□□ -0.22
VPS37C-204ENST00000538036 MAP2K1Q02750 393 aaPredicted RBP13.65□□□□□ -0.22
VPS37C-204ENST00000538036 DEFB115Q30KQ5 88 aa13.65□□□□□ -0.22
VPS37C-204ENST00000538036 NBPF10Q6P3W6 841 aaKnown RBP13.65□□□□□ -0.22
VPS37C-204ENST00000538036 SYNE4Q8N205 404 aa13.65□□□□□ -0.22
VPS37C-204ENST00000538036 NBPF15Q8N660 670 aa13.65□□□□□ -0.22
VPS37C-204ENST00000538036 PRAMEF22A3QJZ6 481 aa13.64□□□□□ -0.23
VPS37C-204ENST00000538036 CRY2Q49AN0 593 aa13.64□□□□□ -0.23
VPS37C-204ENST00000538036 NYXQ9GZU5 481 aa13.64□□□□□ -0.23
VPS37C-204ENST00000538036 BCORQ6W2J9 1755 aa13.63□□□□□ -0.23
VPS37C-204ENST00000538036 ERVV-1B6SEH8 477 aa13.63□□□□□ -0.23
VPS37C-204ENST00000538036 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
VPS37C-204ENST00000538036 EIF6P56537 245 aaKnown RBP13.63□□□□□ -0.23
VPS37C-204ENST00000538036 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
VPS37C-204ENST00000538036 TAF7Q15545 349 aaPredicted RBP13.63□□□□□ -0.23
VPS37C-204ENST00000538036 MCM10Q7L590 875 aa13.63□□□□□ -0.23
VPS37C-204ENST00000538036 RNF123Q5XPI4 1314 aa13.63□□□□□ -0.23
VPS37C-204ENST00000538036 LBX1P52954 281 aa13.62□□□□□ -0.23
VPS37C-204ENST00000538036 MAP1SQ66K74 1059 aaPredicted RBP13.62□□□□□ -0.23
VPS37C-204ENST00000538036 OLFM4Q6UX06 510 aa13.62□□□□□ -0.23
VPS37C-204ENST00000538036 FAM177BA6PVY3 158 aa13.61□□□□□ -0.23
VPS37C-204ENST00000538036 LMOD1P29536 600 aaPredicted RBP13.61□□□□□ -0.23
VPS37C-204ENST00000538036 HOXA10P31260 410 aaPredicted RBP13.61□□□□□ -0.23
VPS37C-204ENST00000538036 CNGB1Q14028 1251 aaPredicted RBP13.61□□□□□ -0.23
VPS37C-204ENST00000538036 HLFQ16534 295 aa13.61□□□□□ -0.23
VPS37C-204ENST00000538036 PNISRQ8TF01 805 aaKnown RBP13.61□□□□□ -0.23
VPS37C-204ENST00000538036 ABT1Q9ULW3 272 aaKnown RBP13.61□□□□□ -0.23
VPS37C-204ENST00000538036 WDR33Q9C0J8 1336 aaKnown RBP13.61□□□□□ -0.23
VPS37C-204ENST00000538036 ECE1P42892 770 aa13.6□□□□□ -0.23
VPS37C-204ENST00000538036 DDX21Q9NR30 783 aaKnown RBP eCLIP13.6□□□□□ -0.23
VPS37C-204ENST00000538036 ADAMTSL1Q8N6G6 1762 aa13.6□□□□□ -0.23
VPS37C-204ENST00000538036 SNED1Q8TER0 1413 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms