RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 RHPN1Q8TCX5 695 aa14.58□□□□□ -0.07
CPSF7-218ENST00000537641 IL25Q9H293 177 aa14.58□□□□□ -0.07
CPSF7-218ENST00000537641 SPTLC3Q9NUV7 552 aa14.58□□□□□ -0.07
CPSF7-218ENST00000537641 NCAPD2Q15021 1401 aa14.58□□□□□ -0.08
CPSF7-218ENST00000537641 HSP90AB4PQ58FF6 505 aa14.58□□□□□ -0.08
CPSF7-218ENST00000537641 SMAP1Q8IYB5 467 aaPredicted RBP14.58□□□□□ -0.08
CPSF7-218ENST00000537641 FUCA2Q9BTY2 467 aa14.58□□□□□ -0.08
CPSF7-218ENST00000537641 USP25Q9UHP3 1055 aa14.58□□□□□ -0.08
CPSF7-218ENST00000537641 SMC3Q9UQE7 1217 aa14.58□□□□□ -0.08
CPSF7-218ENST00000537641 CNPY2Q9Y2B0 182 aa14.58□□□□□ -0.08
CPSF7-218ENST00000537641 TTC41PQ6P2S7 1318 aa14.57□□□□□ -0.08
CPSF7-218ENST00000537641 ADCY5O95622 1261 aa14.57□□□□□ -0.08
CPSF7-218ENST00000537641 PDIA4P13667 645 aaKnown RBP14.57□□□□□ -0.08
CPSF7-218ENST00000537641 AK2P54819 239 aa14.57□□□□□ -0.08
CPSF7-218ENST00000537641 NOLC1Q14978 699 aaKnown RBP eCLIP14.57□□□□□ -0.08
CPSF7-218ENST00000537641 USHBP1Q8N6Y0 703 aa14.57□□□□□ -0.08
CPSF7-218ENST00000537641 ZSCAN31Q96LW9 406 aaPredicted RBP14.57□□□□□ -0.08
CPSF7-218ENST00000537641 KDM4AO75164 1064 aa14.56□□□□□ -0.08
CPSF7-218ENST00000537641 SYT1P21579 422 aa14.56□□□□□ -0.08
CPSF7-218ENST00000537641 DNTTIP2Q5QJE6 756 aaKnown RBP14.56□□□□□ -0.08
CPSF7-218ENST00000537641 NBPF6Q5VWK0 638 aa14.56□□□□□ -0.08
CPSF7-218ENST00000537641 NUTM1Q86Y26 1132 aa14.56□□□□□ -0.08
CPSF7-218ENST00000537641 NBPF4Q96M43 638 aa14.56□□□□□ -0.08
CPSF7-218ENST00000537641 CHMP4AQ9BY43 222 aa14.56□□□□□ -0.08
CPSF7-218ENST00000537641 IL1RAPL2Q9NP60 686 aa14.56□□□□□ -0.08
CPSF7-218ENST00000537641 SURF6O75683 361 aaKnown RBP14.55□□□□□ -0.08
CPSF7-218ENST00000537641 RUFY3Q7L099 469 aa14.55□□□□□ -0.08
CPSF7-218ENST00000537641 PPP1R42Q7Z4L9 355 aa14.55□□□□□ -0.08
CPSF7-218ENST00000537641 RUFY2Q8WXA3 655 aa14.55□□□□□ -0.08
CPSF7-218ENST00000537641 TM6SF1Q9BZW5 370 aa14.55□□□□□ -0.08
CPSF7-218ENST00000537641 SH2B1Q9NRF2 756 aaPredicted RBP14.55□□□□□ -0.08
CPSF7-218ENST00000537641 MST1RQ04912 1400 aa14.55□□□□□ -0.08
CPSF7-218ENST00000537641 HCLS1P14317 486 aaPredicted RBP14.55□□□□□ -0.08
CPSF7-218ENST00000537641 KCNB2Q92953 911 aa14.55□□□□□ -0.08
CPSF7-218ENST00000537641 ORAI2Q96SN7 254 aa14.55□□□□□ -0.08
CPSF7-218ENST00000537641 ALS2Q96Q42 1657 aa14.54□□□□□ -0.08
CPSF7-218ENST00000537641 GCP02774 474 aa14.54□□□□□ -0.08
CPSF7-218ENST00000537641 HOXB7P09629 217 aa14.54□□□□□ -0.08
CPSF7-218ENST00000537641 FOXD4L6Q3SYB3 417 aaPredicted RBP14.54□□□□□ -0.08
CPSF7-218ENST00000537641 VPS53Q5VIR6 699 aa14.54□□□□□ -0.08
CPSF7-218ENST00000537641 FOXD4L3Q6VB84 417 aaPredicted RBP14.54□□□□□ -0.08
CPSF7-218ENST00000537641 CCDC94Q9BW85 323 aaPredicted RBP14.54□□□□□ -0.08
CPSF7-218ENST00000537641 OVOS2A0A0G2JMS6 1433 aa14.54□□□□□ -0.08
CPSF7-218ENST00000537641 GLRX3O76003 335 aaKnown RBP14.53□□□□□ -0.08
CPSF7-218ENST00000537641 HDGFL1Q5TGJ6 251 aa14.53□□□□□ -0.08
CPSF7-218ENST00000537641 ARHGEF25Q86VW2 580 aa14.53□□□□□ -0.08
CPSF7-218ENST00000537641 C1orf167Q5SNV9 1468 aa14.53□□□□□ -0.08
CPSF7-218ENST00000537641 RGPD5Q99666 1765 aa14.53□□□□□ -0.08
CPSF7-218ENST00000537641 FIBPO43427 364 aa14.52□□□□□ -0.08
CPSF7-218ENST00000537641 AMOTQ4VCS5 1084 aa14.52□□□□□ -0.08
CPSF7-218ENST00000537641 RASEFQ8IZ41 740 aa14.52□□□□□ -0.08
CPSF7-218ENST00000537641 MTMR6Q9Y217 621 aa14.52□□□□□ -0.08
CPSF7-218ENST00000537641 CCDC171Q6TFL3 1326 aa14.52□□□□□ -0.08
CPSF7-218ENST00000537641 GOLGA6L6A8MZA4 724 aa14.52□□□□□ -0.09
CPSF7-218ENST00000537641 PLEKHO1Q53GL0 409 aaPredicted RBP14.52□□□□□ -0.09
CPSF7-218ENST00000537641 AKAP4Q5JQC9 854 aa14.52□□□□□ -0.09
CPSF7-218ENST00000537641 PROSER2Q86WR7 435 aaPredicted RBP14.52□□□□□ -0.09
CPSF7-218ENST00000537641 HYPKQ9NX55 129 aa14.52□□□□□ -0.09
CPSF7-218ENST00000537641 LMTK3Q96Q04 1460 aa14.52□□□□□ -0.09
CPSF7-218ENST00000537641 SIPA1L3O60292 1781 aaPredicted RBP14.52□□□□□ -0.09
CPSF7-218ENST00000537641 ZBTB7CA1YPR0 619 aa14.51□□□□□ -0.09
CPSF7-218ENST00000537641 SRGAP3O43295 1099 aa14.51□□□□□ -0.09
CPSF7-218ENST00000537641 MAP4K4O95819 1239 aaPredicted RBP14.51□□□□□ -0.09
CPSF7-218ENST00000537641 CASTP20810 708 aaKnown RBP14.51□□□□□ -0.09
CPSF7-218ENST00000537641 GJB2P29033 226 aa14.51□□□□□ -0.09
CPSF7-218ENST00000537641 NECTIN2Q92692 538 aa14.51□□□□□ -0.09
CPSF7-218ENST00000537641 TTC12Q9H892 705 aaPredicted RBP14.51□□□□□ -0.09
CPSF7-218ENST00000537641 ZSWIM6Q9HCJ5 1215 aa14.51□□□□□ -0.09
CPSF7-218ENST00000537641 DIAPH3Q9NSV4 1193 aa14.51□□□□□ -0.09
CPSF7-218ENST00000537641 ADAMTS7Q9UKP4 1686 aa14.5□□□□□ -0.09
CPSF7-218ENST00000537641 MTX1Q13505 466 aa14.5□□□□□ -0.09
CPSF7-218ENST00000537641 LRRC59Q96AG4 307 aaKnown RBP14.5□□□□□ -0.09
CPSF7-218ENST00000537641 GPATCH3Q96I76 525 aa14.5□□□□□ -0.09
CPSF7-218ENST00000537641 C19orf44Q9H6X5 657 aa14.5□□□□□ -0.09
CPSF7-218ENST00000537641 PDRG1Q9NUG6 133 aa14.5□□□□□ -0.09
CPSF7-218ENST00000537641 ELP1O95163 1332 aa14.5□□□□□ -0.09
CPSF7-218ENST00000537641 CCDC192P0DO97 292 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 EIF4A1P60842 406 aaKnown RBP14.49□□□□□ -0.09
CPSF7-218ENST00000537641 ZNF530Q6P9A1 599 aaPredicted RBP14.49□□□□□ -0.09
CPSF7-218ENST00000537641 KRT28Q7Z3Y7 464 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 CCDC83Q8IWF9 413 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 KIAA1524Q8TCG1 905 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 DNAAF4Q8WXU2 420 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 ZNF830Q96NB3 372 aaPredicted RBP14.49□□□□□ -0.09
CPSF7-218ENST00000537641 PHAXQ9H814 394 aaKnown RBP14.49□□□□□ -0.09
CPSF7-218ENST00000537641 PRDM4Q9UKN5 801 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 CYP46A1Q9Y6A2 500 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 DCCP43146 1447 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 LARGE1O95461 756 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 TEFQ10587 303 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 BEND3Q5T5X7 828 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 CWC27Q6UX04 472 aaKnown RBP14.49□□□□□ -0.09
CPSF7-218ENST00000537641 ERC1Q8IUD2 1116 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 ANKRD24Q8TF21 1146 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 LGR6Q9HBX8 967 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 KIF3AQ9Y496 699 aa14.49□□□□□ -0.09
CPSF7-218ENST00000537641 PXDNQ92626 1479 aa14.48□□□□□ -0.09
CPSF7-218ENST00000537641 HIP1O00291 1037 aa14.48□□□□□ -0.09
CPSF7-218ENST00000537641 DNM1Q05193 864 aaKnown RBP14.48□□□□□ -0.09
CPSF7-218ENST00000537641 GIMAP6Q6P9H5 292 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms