RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 BRIP1Q9BX63 1249 aa22.46■■□□□ 1.19
SFSWAP-205ENST00000537164 MRS2Q9HD23 443 aa22.46■■□□□ 1.19
SFSWAP-205ENST00000537164 PDZRN3Q9UPQ7 1066 aa22.46■■□□□ 1.19
SFSWAP-205ENST00000537164 HOXB7P09629 217 aa22.45■■□□□ 1.18
SFSWAP-205ENST00000537164 CALD1Q05682 793 aaKnown RBP22.45■■□□□ 1.18
SFSWAP-205ENST00000537164 HLFQ16534 295 aa22.44■■□□□ 1.18
SFSWAP-205ENST00000537164 DALRD3Q5D0E6 543 aaKnown RBP22.44■■□□□ 1.18
SFSWAP-205ENST00000537164 MAP3K15Q6ZN16 1313 aa22.44■■□□□ 1.18
SFSWAP-205ENST00000537164 IFT57Q9NWB7 429 aa22.44■■□□□ 1.18
SFSWAP-205ENST00000537164 COL11A2P13942 1736 aaPredicted RBP22.43■■□□□ 1.18
SFSWAP-205ENST00000537164 ATP10DQ9P241 1426 aa22.43■■□□□ 1.18
SFSWAP-205ENST00000537164 ADCY9O60503 1353 aa22.43■■□□□ 1.18
SFSWAP-205ENST00000537164 MYL6BP14649 208 aa22.43■■□□□ 1.18
SFSWAP-205ENST00000537164 CCDC27Q2M243 656 aa22.43■■□□□ 1.18
SFSWAP-205ENST00000537164 TTLL7Q6ZT98 887 aa22.43■■□□□ 1.18
SFSWAP-205ENST00000537164 CNBD1Q8NA66 436 aa22.43■■□□□ 1.18
SFSWAP-205ENST00000537164 LAS1LQ9Y4W2 734 aaKnown RBP22.43■■□□□ 1.18
SFSWAP-205ENST00000537164 EIF2S2P20042 333 aaKnown RBP22.42■■□□□ 1.18
SFSWAP-205ENST00000537164 PDE6BP35913 854 aa22.42■■□□□ 1.18
SFSWAP-205ENST00000537164 MBIPQ9NS73 344 aa22.42■■□□□ 1.18
SFSWAP-205ENST00000537164 H0YIN7 160 aa22.41■■□□□ 1.18
SFSWAP-205ENST00000537164 GNAI1P63096 354 aa22.41■■□□□ 1.18
SFSWAP-205ENST00000537164 KRT24Q2M2I5 525 aa22.41■■□□□ 1.18
SFSWAP-205ENST00000537164 KIF6Q6ZMV9 814 aa22.41■■□□□ 1.18
SFSWAP-205ENST00000537164 NIP7Q9Y221 180 aaKnown RBP eCLIP22.41■■□□□ 1.18
SFSWAP-205ENST00000537164 C2CD5Q86YS7 1000 aa22.4■■□□□ 1.18
SFSWAP-205ENST00000537164 NGEFQ8N5V2 710 aa22.4■■□□□ 1.18
SFSWAP-205ENST00000537164 ST5P78524 1137 aa22.39■■□□□ 1.17
SFSWAP-205ENST00000537164 PROSER3Q2NL68 480 aa22.39■■□□□ 1.17
SFSWAP-205ENST00000537164 TPTE2Q6XPS3 522 aa22.39■■□□□ 1.17
SFSWAP-205ENST00000537164 NBPF5PQ86XG9 351 aaPredicted RBP22.39■■□□□ 1.17
SFSWAP-205ENST00000537164 DDX21Q9NR30 783 aaKnown RBP eCLIP22.39■■□□□ 1.17
SFSWAP-205ENST00000537164 ARFGEF2Q9Y6D5 1785 aa22.38■■□□□ 1.17
SFSWAP-205ENST00000537164 KLRG2A4D1S0 409 aaPredicted RBP22.38■■□□□ 1.17
SFSWAP-205ENST00000537164 GIGYF2Q6Y7W6 1299 aaKnown RBP22.38■■□□□ 1.17
SFSWAP-205ENST00000537164 TTLL6Q8N841 843 aa22.38■■□□□ 1.17
SFSWAP-205ENST00000537164 IBTKQ9P2D0 1353 aaPredicted RBP22.38■■□□□ 1.17
SFSWAP-205ENST00000537164 SBF1O95248 1867 aa22.37■■□□□ 1.17
SFSWAP-205ENST00000537164 ANKRD36CQ5JPF3 1778 aa22.37■■□□□ 1.17
SFSWAP-205ENST00000537164 ARHGAP27Q6ZUM4 889 aa22.36■■□□□ 1.17
SFSWAP-205ENST00000537164 WWC1Q8IX03 1113 aa22.36■■□□□ 1.17
SFSWAP-205ENST00000537164 ZNF34Q8IZ26 560 aa22.36■■□□□ 1.17
SFSWAP-205ENST00000537164 CCDC24Q8N4L8 307 aa22.36■■□□□ 1.17
SFSWAP-205ENST00000537164 ZBTB3Q9H5J0 574 aa22.36■■□□□ 1.17
SFSWAP-205ENST00000537164 NPHP1O15259 732 aa22.35■■□□□ 1.17
SFSWAP-205ENST00000537164 ANXA1P04083 346 aa22.35■■□□□ 1.17
SFSWAP-205ENST00000537164 SRGNP10124 158 aa22.35■■□□□ 1.17
SFSWAP-205ENST00000537164 HDGFL1Q5TGJ6 251 aa22.35■■□□□ 1.17
SFSWAP-205ENST00000537164 DUSP27Q5VZP5 1158 aa22.35■■□□□ 1.17
SFSWAP-205ENST00000537164 UBN2Q6ZU65 1347 aa22.34■■□□□ 1.17
SFSWAP-205ENST00000537164 RIC1Q4ADV7 1423 aa22.34■■□□□ 1.17
SFSWAP-205ENST00000537164 COPS6Q7L5N1 327 aa22.34■■□□□ 1.17
SFSWAP-205ENST00000537164 NECTIN2Q92692 538 aa22.34■■□□□ 1.17
SFSWAP-205ENST00000537164 NYXQ9GZU5 481 aa22.34■■□□□ 1.17
SFSWAP-205ENST00000537164 DBF4Q9UBU7 674 aaPredicted RBP22.34■■□□□ 1.17
SFSWAP-205ENST00000537164 IL16Q14005 1332 aa22.33■■□□□ 1.17
SFSWAP-205ENST00000537164 STYK1Q6J9G0 422 aa22.33■■□□□ 1.17
SFSWAP-205ENST00000537164 CHPF2Q9P2E5 772 aa22.33■■□□□ 1.17
SFSWAP-205ENST00000537164 XAGE3Q8WTP9 111 aa22.32■■□□□ 1.16
SFSWAP-205ENST00000537164 MASTLQ96GX5 879 aa22.32■■□□□ 1.16
SFSWAP-205ENST00000537164 CACNA1SQ13698 1873 aa22.32■■□□□ 1.16
SFSWAP-205ENST00000537164 SLX4Q8IY92 1834 aa22.31■■□□□ 1.16
SFSWAP-205ENST00000537164 FER1L6Q2WGJ9 1857 aa22.31■■□□□ 1.16
SFSWAP-205ENST00000537164 TNRC6CQ9HCJ0 1690 aaKnown RBP22.31■■□□□ 1.16
SFSWAP-205ENST00000537164 PARP10Q53GL7 1025 aa22.31■■□□□ 1.16
SFSWAP-205ENST00000537164 CNKSR1Q969H4 720 aa22.3■■□□□ 1.16
SFSWAP-205ENST00000537164 ZNF622Q969S3 477 aaKnown RBP eCLIP22.3■■□□□ 1.161e-9■■□□□ 13
SFSWAP-205ENST00000537164 HYPKQ9NX55 129 aa22.3■■□□□ 1.16
SFSWAP-205ENST00000537164 NTSR2O95665 410 aa22.29■■□□□ 1.16
SFSWAP-205ENST00000537164 GPTP24298 496 aa22.29■■□□□ 1.16
SFSWAP-205ENST00000537164 HSP90AB3PQ58FF7 597 aa22.29■■□□□ 1.16
SFSWAP-205ENST00000537164 SUSD4Q5VX71 490 aa22.29■■□□□ 1.16
SFSWAP-205ENST00000537164 C8orf58Q8NAV2 365 aa22.29■■□□□ 1.16
SFSWAP-205ENST00000537164 CHMP4AQ9BY43 222 aa22.29■■□□□ 1.16
SFSWAP-205ENST00000537164 ABCC12Q96J65 1359 aa22.28■■□□□ 1.16
SFSWAP-205ENST00000537164 FAM177BA6PVY3 158 aa22.28■■□□□ 1.16
SFSWAP-205ENST00000537164 NPR1P16066 1061 aa22.28■■□□□ 1.16
SFSWAP-205ENST00000537164 AIMP1Q12904 312 aaKnown RBP22.28■■□□□ 1.16
SFSWAP-205ENST00000537164 CRY2Q49AN0 593 aa22.28■■□□□ 1.16
SFSWAP-205ENST00000537164 RNF123Q5XPI4 1314 aa22.28■■□□□ 1.16
SFSWAP-205ENST00000537164 GTF2E1P29083 439 aaPredicted RBP22.27■■□□□ 1.16
SFSWAP-205ENST00000537164 TCIRG1Q13488 830 aa22.27■■□□□ 1.16
SFSWAP-205ENST00000537164 CCDC88AQ3V6T2 1871 aa22.27■■□□□ 1.16
SFSWAP-205ENST00000537164 PPP1R42Q7Z4L9 355 aa22.27■■□□□ 1.16
SFSWAP-205ENST00000537164 WDR63Q8IWG1 891 aa22.27■■□□□ 1.16
SFSWAP-205ENST00000537164 PLBD2Q8NHP8 589 aa22.27■■□□□ 1.16
SFSWAP-205ENST00000537164 ERFEQ4G0M1 354 aa22.26■■□□□ 1.15
SFSWAP-205ENST00000537164 C9orf131Q5VYM1 1079 aa22.26■■□□□ 1.15
SFSWAP-205ENST00000537164 PRPF40BQ6NWY9 871 aaKnown RBP22.26■■□□□ 1.15
SFSWAP-205ENST00000537164 ANKRD13DQ6ZTN6 518 aa22.26■■□□□ 1.15
SFSWAP-205ENST00000537164 NUTM1Q86Y26 1132 aa22.26■■□□□ 1.15
SFSWAP-205ENST00000537164 ELL2O00472 640 aaPredicted RBP22.25■■□□□ 1.15
SFSWAP-205ENST00000537164 FAM9BQ8IZU0 186 aa22.25■■□□□ 1.15
SFSWAP-205ENST00000537164 C7orf43Q8WVR3 580 aa22.25■■□□□ 1.15
SFSWAP-205ENST00000537164 TSR2Q969E8 191 aaKnown RBP22.25■■□□□ 1.15
SFSWAP-205ENST00000537164 DICER1Q9UPY3 1922 aaKnown RBP22.25■■□□□ 1.15
SFSWAP-205ENST00000537164 SENP3-EIF4A1A0A087X0R7 540 aa22.24■■□□□ 1.15
SFSWAP-205ENST00000537164 NFKBIEO00221 500 aa22.24■■□□□ 1.15
SFSWAP-205ENST00000537164 C21orf2O43822 256 aa22.24■■□□□ 1.15
SFSWAP-205ENST00000537164 SLC10A5Q5PT55 438 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms