RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 GGNBP2Q9H3C7 697 aa13.54□□□□□ -0.24
CPSF7-217ENST00000537162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.54□□□□□ -0.244e-9■■■□□ 15.2
CPSF7-217ENST00000537162 TONSLQ96HA7 1378 aa13.54□□□□□ -0.24
CPSF7-217ENST00000537162 COL6A3P12111 3177 aa13.53□□□□□ -0.24
CPSF7-217ENST00000537162 TRPA1O75762 1119 aa13.53□□□□□ -0.24
CPSF7-217ENST00000537162 PDE6BP35913 854 aa13.53□□□□□ -0.24
CPSF7-217ENST00000537162 RNF186Q9NXI6 227 aa13.53□□□□□ -0.24
CPSF7-217ENST00000537162 COL15A1P39059 1388 aa13.53□□□□□ -0.24
CPSF7-217ENST00000537162 SCNN1DP51172 638 aa13.52□□□□□ -0.25
CPSF7-217ENST00000537162 FKBP4Q02790 459 aaKnown RBP eCLIP13.52□□□□□ -0.25
CPSF7-217ENST00000537162 NOGQ13253 232 aa13.52□□□□□ -0.25
CPSF7-217ENST00000537162 PRR5LQ6MZQ0 368 aa13.52□□□□□ -0.25
CPSF7-217ENST00000537162 DNAJC10Q8IXB1 793 aa13.52□□□□□ -0.25
CPSF7-217ENST00000537162 SYNE4Q8N205 404 aa13.52□□□□□ -0.25
CPSF7-217ENST00000537162 GJA3Q9Y6H8 435 aa13.52□□□□□ -0.25
CPSF7-217ENST00000537162 CUL9Q8IWT3 2517 aa13.51□□□□□ -0.25
CPSF7-217ENST00000537162 AKAP11Q9UKA4 1901 aa13.51□□□□□ -0.25
CPSF7-217ENST00000537162 CNKSR1Q969H4 720 aa13.51□□□□□ -0.25
CPSF7-217ENST00000537162 EYA1Q99502 592 aa13.51□□□□□ -0.25
CPSF7-217ENST00000537162 GLIS2Q9BZE0 524 aaPredicted RBP13.51□□□□□ -0.25
CPSF7-217ENST00000537162 ZNF408Q9H9D4 720 aa13.51□□□□□ -0.25
CPSF7-217ENST00000537162 SAGE1Q9NXZ1 904 aa13.51□□□□□ -0.25
CPSF7-217ENST00000537162 PITPNM2Q9BZ72 1349 aa13.5□□□□□ -0.25
CPSF7-217ENST00000537162 FAM155AB1AL88 458 aaPredicted RBP13.5□□□□□ -0.25
CPSF7-217ENST00000537162 FYB1O15117 783 aa13.5□□□□□ -0.25
CPSF7-217ENST00000537162 SRGNP10124 158 aa13.5□□□□□ -0.25
CPSF7-217ENST00000537162 CABP4P57796 275 aa13.5□□□□□ -0.25
CPSF7-217ENST00000537162 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
CPSF7-217ENST00000537162 STYK1Q6J9G0 422 aa13.5□□□□□ -0.25
CPSF7-217ENST00000537162 EMILIN1Q9Y6C2 1016 aa13.5□□□□□ -0.25
CPSF7-217ENST00000537162 ROCK2O75116 1388 aaKnown RBP13.49□□□□□ -0.25
CPSF7-217ENST00000537162 CCDC93Q567U6 631 aa13.49□□□□□ -0.25
CPSF7-217ENST00000537162 SOGA3Q5TF21 947 aa13.49□□□□□ -0.25
CPSF7-217ENST00000537162 ZBTB1Q9Y2K1 713 aa13.49□□□□□ -0.25
CPSF7-217ENST00000537162 CYP19A1P11511 503 aaPredicted RBP13.48□□□□□ -0.25
CPSF7-217ENST00000537162 IARSP41252 1262 aaKnown RBP13.48□□□□□ -0.25
CPSF7-217ENST00000537162 KIF23Q02241 960 aaPredicted RBP13.48□□□□□ -0.25
CPSF7-217ENST00000537162 AKAP4Q5JQC9 854 aa13.48□□□□□ -0.25
CPSF7-217ENST00000537162 DLK2Q6UY11 383 aa13.48□□□□□ -0.25
CPSF7-217ENST00000537162 PPP4R3CPQ6ZMV5 832 aa13.48□□□□□ -0.25
CPSF7-217ENST00000537162 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
CPSF7-217ENST00000537162 ANKRD26Q9UPS8 1709 aa13.47□□□□□ -0.25
CPSF7-217ENST00000537162 LMOD1P29536 600 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-217ENST00000537162 USP50Q70EL3 339 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-217ENST00000537162 NFATC2IPQ8NCF5 419 aa13.47□□□□□ -0.25
CPSF7-217ENST00000537162 PAPPA2Q9BXP8 1791 aa13.47□□□□□ -0.25
CPSF7-217ENST00000537162 POTEFA5A3E0 1075 aa13.46□□□□□ -0.25
CPSF7-217ENST00000537162 MASTLQ96GX5 879 aa13.46□□□□□ -0.25
CPSF7-217ENST00000537162 SCN7AQ01118 1682 aa13.46□□□□□ -0.26
CPSF7-217ENST00000537162 KIF24Q5T7B8 1368 aa13.45□□□□□ -0.26
CPSF7-217ENST00000537162 HUNKP57058 714 aa13.45□□□□□ -0.26
CPSF7-217ENST00000537162 KIF20BQ96Q89 1820 aa13.45□□□□□ -0.26
CPSF7-217ENST00000537162 L3MBTL2Q969R5 705 aa13.44□□□□□ -0.26
CPSF7-217ENST00000537162 SNED1Q8TER0 1413 aa13.44□□□□□ -0.26
CPSF7-217ENST00000537162 TRIOBPQ9H2D6 2365 aa13.44□□□□□ -0.26
CPSF7-217ENST00000537162 PKN2Q16513 984 aaKnown RBP13.43□□□□□ -0.26
CPSF7-217ENST00000537162 CSRNP1Q96S65 589 aa13.43□□□□□ -0.26
CPSF7-217ENST00000537162 HTTP42858 3142 aa13.42□□□□□ -0.26
CPSF7-217ENST00000537162 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
CPSF7-217ENST00000537162 EIF6P56537 245 aaKnown RBP13.42□□□□□ -0.26
CPSF7-217ENST00000537162 RGMBQ6NW40 437 aa13.42□□□□□ -0.26
CPSF7-217ENST00000537162 CANXP27824 592 aaKnown RBP13.41□□□□□ -0.26
CPSF7-217ENST00000537162 SLC51AQ86UW1 340 aa13.41□□□□□ -0.26
CPSF7-217ENST00000537162 ZNF296Q8WUU4 475 aaPredicted RBP13.41□□□□□ -0.26
CPSF7-217ENST00000537162 OTUD5Q96G74 571 aa13.41□□□□□ -0.26
CPSF7-217ENST00000537162 RBBP6Q7Z6E9 1792 aaKnown RBP13.4□□□□□ -0.26
CPSF7-217ENST00000537162 HSP90AB1P08238 724 aaKnown RBP13.4□□□□□ -0.26
CPSF7-217ENST00000537162 MNX1P50219 401 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-217ENST00000537162 HIRAP54198 1017 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-217ENST00000537162 ZNF530Q6P9A1 599 aaPredicted RBP13.4□□□□□ -0.26
CPSF7-217ENST00000537162 RTKN2Q8IZC4 609 aa13.4□□□□□ -0.26
CPSF7-217ENST00000537162 CNBD1Q8NA66 436 aa13.4□□□□□ -0.26
CPSF7-217ENST00000537162 JDP2Q8WYK2 163 aa13.4□□□□□ -0.26
CPSF7-217ENST00000537162 ADARB2Q9NS39 739 aaKnown RBP13.4□□□□□ -0.26
CPSF7-217ENST00000537162 PGAP2Q9UHJ9 254 aa13.4□□□□□ -0.26
CPSF7-217ENST00000537162 HDAC9Q9UKV0 1011 aa13.4□□□□□ -0.26
CPSF7-217ENST00000537162 ST20-MTHFSA0A0A6YYL1 179 aa13.39□□□□□ -0.27
CPSF7-217ENST00000537162 MTHFSP49914 203 aa13.39□□□□□ -0.27
CPSF7-217ENST00000537162 FBXO46Q6PJ61 603 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-217ENST00000537162 GPRC5DQ9NZD1 345 aa13.39□□□□□ -0.27
CPSF7-217ENST00000537162 BRCA2P51587 3418 aa13.39□□□□□ -0.27
CPSF7-217ENST00000537162 TBC1D8O95759 1140 aa13.38□□□□□ -0.27
CPSF7-217ENST00000537162 EIF5P55010 431 aaKnown RBP13.38□□□□□ -0.27
CPSF7-217ENST00000537162 SLC39A6Q13433 755 aa13.38□□□□□ -0.27
CPSF7-217ENST00000537162 CENPFP49454 3210 aa13.38□□□□□ -0.27
CPSF7-217ENST00000537162 WASHC2AQ641Q2 1341 aa13.38□□□□□ -0.27
CPSF7-217ENST00000537162 NPR1P16066 1061 aa13.37□□□□□ -0.27
CPSF7-217ENST00000537162 ZNF157P51786 506 aaPredicted RBP13.37□□□□□ -0.27
CPSF7-217ENST00000537162 ST5P78524 1137 aa13.37□□□□□ -0.27
CPSF7-217ENST00000537162 USP48Q86UV5 1035 aa13.37□□□□□ -0.27
CPSF7-217ENST00000537162 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
CPSF7-217ENST00000537162 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
CPSF7-217ENST00000537162 H0YGN5 161 aa13.36□□□□□ -0.27
CPSF7-217ENST00000537162 SLC10A3P09131 477 aa13.36□□□□□ -0.27
CPSF7-217ENST00000537162 EN2P19622 333 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-217ENST00000537162 CDC37L1Q7L3B6 337 aa13.36□□□□□ -0.27
CPSF7-217ENST00000537162 TRPM4Q8TD43 1214 aa13.36□□□□□ -0.27
CPSF7-217ENST00000537162 CCDC102AQ96A19 550 aa13.36□□□□□ -0.27
CPSF7-217ENST00000537162 SHTN1A0MZ66 631 aa13.35□□□□□ -0.27
CPSF7-217ENST00000537162 NPHP1O15259 732 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms