RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 TATP17735 454 aaPredicted RBP22.72■■□□□ 1.23
COPS7A-204ENST00000534947 PDIA6Q15084 440 aa22.72■■□□□ 1.23
COPS7A-204ENST00000534947 LARP1Q6PKG0 1096 aaKnown RBP22.71■■□□□ 1.23
COPS7A-204ENST00000534947 PKD1L3Q7Z443 1732 aa22.71■■□□□ 1.23
COPS7A-204ENST00000534947 MBD3O95983 291 aa22.7■■□□□ 1.23
COPS7A-204ENST00000534947 IFIT2P09913 472 aaKnown RBP22.7■■□□□ 1.22
COPS7A-204ENST00000534947 RRAGDQ9NQL2 400 aaPredicted RBP22.7■■□□□ 1.22
COPS7A-204ENST00000534947 PHKG2P15735 406 aa22.69■■□□□ 1.22
COPS7A-204ENST00000534947 CWF19L2Q2TBE0 894 aaKnown RBP22.69■■□□□ 1.22
COPS7A-204ENST00000534947 EVI5LQ96CN4 794 aa22.69■■□□□ 1.22
COPS7A-204ENST00000534947 DIAPH3Q9NSV4 1193 aa22.69■■□□□ 1.22
COPS7A-204ENST00000534947 SNX14Q9Y5W7 946 aa22.69■■□□□ 1.22
COPS7A-204ENST00000534947 HIP1O00291 1037 aa22.69■■□□□ 1.22
COPS7A-204ENST00000534947 PRPF40AO75400 957 aaKnown RBP22.69■■□□□ 1.22
COPS7A-204ENST00000534947 ATF3P18847 181 aa22.69■■□□□ 1.22
COPS7A-204ENST00000534947 ZSCAN23Q3MJ62 389 aa22.69■■□□□ 1.22
COPS7A-204ENST00000534947 TTC14Q96N46 770 aa22.69■■□□□ 1.22
COPS7A-204ENST00000534947 UPF3BQ9BZI7 483 aaKnown RBP22.69■■□□□ 1.22
COPS7A-204ENST00000534947 PRAMEF22A3QJZ6 481 aa22.68■■□□□ 1.22
COPS7A-204ENST00000534947 MAP4K4O95819 1239 aaPredicted RBP22.68■■□□□ 1.22
COPS7A-204ENST00000534947 CCDC173Q0VFZ6 552 aa22.68■■□□□ 1.22
COPS7A-204ENST00000534947 NEXNQ0ZGT2 675 aa22.68■■□□□ 1.22
COPS7A-204ENST00000534947 CAVIN1Q6NZI2 390 aaKnown RBP22.68■■□□□ 1.22
COPS7A-204ENST00000534947 IFNL2Q8IZJ0 200 aa22.67■■□□□ 1.22
COPS7A-204ENST00000534947 KCNB2Q92953 911 aa22.67■■□□□ 1.22
COPS7A-204ENST00000534947 SUCLG2Q96I99 432 aa22.67■■□□□ 1.22
COPS7A-204ENST00000534947 COL15A1P39059 1388 aa22.67■■□□□ 1.22
COPS7A-204ENST00000534947 PARP4Q9UKK3 1724 aaKnown RBP22.67■■□□□ 1.22
COPS7A-204ENST00000534947 MEGF6O75095 1541 aa22.67■■□□□ 1.22
COPS7A-204ENST00000534947 CLCN1P35523 988 aa22.67■■□□□ 1.22
COPS7A-204ENST00000534947 NASPP49321 788 aaPredicted RBP22.67■■□□□ 1.22
COPS7A-204ENST00000534947 ZC3H6P61129 1189 aaKnown RBP22.67■■□□□ 1.22
COPS7A-204ENST00000534947 ANP32BQ92688 251 aaKnown RBP22.67■■□□□ 1.22
COPS7A-204ENST00000534947 KAZALD1Q96I82 304 aa22.67■■□□□ 1.22
COPS7A-204ENST00000534947 PPP1R9BQ96SB3 815 aa22.67■■□□□ 1.22
COPS7A-204ENST00000534947 NLRP2Q9NX02 1062 aa22.67■■□□□ 1.22
COPS7A-204ENST00000534947 WDR33Q9C0J8 1336 aaKnown RBP22.67■■□□□ 1.22
COPS7A-204ENST00000534947 G3BP1Q13283 466 aaKnown RBP eCLIP22.66■■□□□ 1.22
COPS7A-204ENST00000534947 TM6SF1Q9BZW5 370 aa22.66■■□□□ 1.22
COPS7A-204ENST00000534947 TNS3Q68CZ2 1445 aa22.66■■□□□ 1.22
COPS7A-204ENST00000534947 CWC27Q6UX04 472 aaKnown RBP22.65■■□□□ 1.22
COPS7A-204ENST00000534947 RIC3Q7Z5B4 369 aa22.65■■□□□ 1.22
COPS7A-204ENST00000534947 GPT2Q8TD30 523 aa22.65■■□□□ 1.22
COPS7A-204ENST00000534947 DCAF5Q96JK2 942 aa22.65■■□□□ 1.22
COPS7A-204ENST00000534947 BICC1Q9H694 974 aaKnown RBP22.65■■□□□ 1.22
COPS7A-204ENST00000534947 SNRKQ9NRH2 765 aa22.65■■□□□ 1.22
COPS7A-204ENST00000534947 IGKV5-2P06315 115 aa22.64■■□□□ 1.22
COPS7A-204ENST00000534947 AACSQ86V21 672 aa22.64■■□□□ 1.22
COPS7A-204ENST00000534947 TRIM44Q96DX7 344 aaPredicted RBP22.64■■□□□ 1.22
COPS7A-204ENST00000534947 METTL22Q9BUU2 404 aaPredicted RBP22.64■■□□□ 1.22
COPS7A-204ENST00000534947 CPDO75976 1380 aa22.64■■□□□ 1.21
COPS7A-204ENST00000534947 TMEM94Q12767 1356 aa22.64■■□□□ 1.21
COPS7A-204ENST00000534947 NEURL1BA8MQ27 555 aa22.64■■□□□ 1.21
COPS7A-204ENST00000534947 NCLP19338 710 aaKnown RBP22.64■■□□□ 1.21
COPS7A-204ENST00000534947 LIMCH1Q9UPQ0 1083 aa22.64■■□□□ 1.21
COPS7A-204ENST00000534947 PA2G4Q9UQ80 394 aaKnown RBP22.64■■□□□ 1.21
COPS7A-204ENST00000534947 LAMB4A4D0S4 1761 aa22.63■■□□□ 1.21
COPS7A-204ENST00000534947 SASH1O94885 1247 aa22.63■■□□□ 1.21
COPS7A-204ENST00000534947 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.63■■□□□ 1.21
COPS7A-204ENST00000534947 SNRPA1P09661 255 aaKnown RBP22.62■■□□□ 1.21
COPS7A-204ENST00000534947 GCKRQ14397 625 aa22.62■■□□□ 1.21
COPS7A-204ENST00000534947 STRCP1A6NGW2 1772 aa22.62■■□□□ 1.21
COPS7A-204ENST00000534947 RASEFQ8IZ41 740 aa22.62■■□□□ 1.21
COPS7A-204ENST00000534947 NFATC2IPQ8NCF5 419 aa22.62■■□□□ 1.21
COPS7A-204ENST00000534947 AIMP1Q12904 312 aaKnown RBP22.61■■□□□ 1.21
COPS7A-204ENST00000534947 CADPS2Q86UW7 1296 aa22.61■■□□□ 1.21
COPS7A-204ENST00000534947 SLC39A6Q13433 755 aa22.6■■□□□ 1.21
COPS7A-204ENST00000534947 VPS53Q5VIR6 699 aa22.6■■□□□ 1.21
COPS7A-204ENST00000534947 LRP10Q7Z4F1 713 aa22.6■■□□□ 1.21
COPS7A-204ENST00000534947 XAGE3Q8WTP9 111 aa22.6■■□□□ 1.21
COPS7A-204ENST00000534947 ESPNB1AK53 854 aa22.6■■□□□ 1.21
COPS7A-204ENST00000534947 AK2P54819 239 aa22.6■■□□□ 1.21
COPS7A-204ENST00000534947 NOL8Q76FK4 1167 aaKnown RBP22.6■■□□□ 1.21
COPS7A-204ENST00000534947 TTC5Q8N0Z6 440 aa22.6■■□□□ 1.21
COPS7A-204ENST00000534947 EAF2Q96CJ1 260 aaPredicted RBP22.6■■□□□ 1.21
COPS7A-204ENST00000534947 ZNF496Q96IT1 587 aaPredicted RBP22.6■■□□□ 1.21
COPS7A-204ENST00000534947 FMNL2Q96PY5 1086 aa22.6■■□□□ 1.21
COPS7A-204ENST00000534947 CCDC171Q6TFL3 1326 aa22.59■■□□□ 1.21
COPS7A-204ENST00000534947 LRSAM1Q6UWE0 723 aa22.59■■□□□ 1.21
COPS7A-204ENST00000534947 TMEM87AQ8NBN3 555 aa22.59■■□□□ 1.21
COPS7A-204ENST00000534947 SYAP1Q96A49 352 aaPredicted RBP22.59■■□□□ 1.21
COPS7A-204ENST00000534947 ZSCAN31Q96LW9 406 aaPredicted RBP22.59■■□□□ 1.21
COPS7A-204ENST00000534947 SH2B1Q9NRF2 756 aaPredicted RBP22.59■■□□□ 1.21
COPS7A-204ENST00000534947 ARFGEF2Q9Y6D5 1785 aa22.59■■□□□ 1.21
COPS7A-204ENST00000534947 AFDNP55196 1824 aaKnown RBP22.59■■□□□ 1.21
COPS7A-204ENST00000534947 ANKRD13DQ6ZTN6 518 aa22.58■■□□□ 1.21
COPS7A-204ENST00000534947 COPS6Q7L5N1 327 aa22.58■■□□□ 1.21
COPS7A-204ENST00000534947 ZSWIM6Q9HCJ5 1215 aa22.58■■□□□ 1.21
COPS7A-204ENST00000534947 COPRSQ9NQ92 184 aa22.58■■□□□ 1.21
COPS7A-204ENST00000534947 NECTIN1Q15223 517 aa22.58■■□□□ 1.2
COPS7A-204ENST00000534947 RUFY3Q7L099 469 aa22.58■■□□□ 1.2
COPS7A-204ENST00000534947 RPAP1Q9BWH6 1393 aaPredicted RBP22.58■■□□□ 1.2
COPS7A-204ENST00000534947 ERBB4Q15303 1308 aa22.57■■□□□ 1.2
COPS7A-204ENST00000534947 PDIA4P13667 645 aaKnown RBP22.57■■□□□ 1.2
COPS7A-204ENST00000534947 TMEM63CQ9P1W3 806 aa22.57■■□□□ 1.2
COPS7A-204ENST00000534947 GLI3P10071 1580 aa22.57■■□□□ 1.2
COPS7A-204ENST00000534947 CSB-PGBD3P0DP91 1061 aa22.57■■□□□ 1.2
COPS7A-204ENST00000534947 ZKSCAN1P17029 563 aaPredicted RBP22.57■■□□□ 1.2
COPS7A-204ENST00000534947 CASTP20810 708 aaKnown RBP22.57■■□□□ 1.2
COPS7A-204ENST00000534947 KLHL34Q8N239 644 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms