RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 TNRC6CQ9HCJ0 1690 aaKnown RBP15.49■□□□□ 0.07
CTNND1-238ENST00000534647 NFKBIEO00221 500 aa15.49■□□□□ 0.07
CTNND1-238ENST00000534647 VIRMAQ69YN4 1812 aaKnown RBP15.49■□□□□ 0.07
CTNND1-238ENST00000534647 CARMIL3Q8ND23 1372 aa15.49■□□□□ 0.07
CTNND1-238ENST00000534647 PRR5LQ6MZQ0 368 aa15.48■□□□□ 0.07
CTNND1-238ENST00000534647 BICDL1Q6ZP65 573 aa15.48■□□□□ 0.07
CTNND1-238ENST00000534647 PHACTR3Q96KR7 559 aa15.48■□□□□ 0.07
CTNND1-238ENST00000534647 TBC1D2BQ9UPU7 963 aa15.48■□□□□ 0.07
CTNND1-238ENST00000534647 WDR90Q96KV7 1748 aa15.48■□□□□ 0.07
CTNND1-238ENST00000534647 CAMTA2O94983 1202 aa15.47■□□□□ 0.07
CTNND1-238ENST00000534647 A1BGP04217 495 aa15.47■□□□□ 0.07
CTNND1-238ENST00000534647 RSPH6AQ9H0K4 717 aa15.47■□□□□ 0.07
CTNND1-238ENST00000534647 LTBP3Q9NS15 1303 aa15.46■□□□□ 0.07
CTNND1-238ENST00000534647 BTBD11A6QL63 1104 aa15.46■□□□□ 0.07
CTNND1-238ENST00000534647 DPY19L2Q6NUT2 758 aa15.46■□□□□ 0.07
CTNND1-238ENST00000534647 CLEC4GQ6UXB4 293 aa15.46■□□□□ 0.07
CTNND1-238ENST00000534647 NPM2Q86SE8 214 aaKnown RBP15.46■□□□□ 0.07
CTNND1-238ENST00000534647 CFAP53Q96M91 514 aa15.46■□□□□ 0.07
CTNND1-238ENST00000534647 SETDB2Q96T68 719 aa15.46■□□□□ 0.07
CTNND1-238ENST00000534647 SIPA1L3O60292 1781 aaPredicted RBP15.45■□□□□ 0.06
CTNND1-238ENST00000534647 POTECB2RU33 542 aa15.45■□□□□ 0.06
CTNND1-238ENST00000534647 PRKAR2BP31323 418 aa15.45■□□□□ 0.06
CTNND1-238ENST00000534647 HTRA3P83110 453 aa15.45■□□□□ 0.06
CTNND1-238ENST00000534647 STYK1Q6J9G0 422 aa15.45■□□□□ 0.06
CTNND1-238ENST00000534647 NUDCQ9Y266 331 aa15.45■□□□□ 0.06
CTNND1-238ENST00000534647 C21orf2O43822 256 aa15.44■□□□□ 0.06
CTNND1-238ENST00000534647 SRGNP10124 158 aa15.44■□□□□ 0.06
CTNND1-238ENST00000534647 CNKSR1Q969H4 720 aa15.44■□□□□ 0.06
CTNND1-238ENST00000534647 ZNF622Q969S3 477 aaKnown RBP eCLIP15.44■□□□□ 0.067e-10■■□□□ 12.1
CTNND1-238ENST00000534647 USP16Q9Y5T5 823 aa15.44■□□□□ 0.06
CTNND1-238ENST00000534647 KCNQ3O43525 872 aa15.43■□□□□ 0.06
CTNND1-238ENST00000534647 HTATSF1O43719 755 aaKnown RBP15.43■□□□□ 0.06
CTNND1-238ENST00000534647 SNRPA1P09661 255 aaKnown RBP15.43■□□□□ 0.06
CTNND1-238ENST00000534647 SOGA3Q5TF21 947 aa15.43■□□□□ 0.06
CTNND1-238ENST00000534647 DZIP3Q86Y13 1208 aaKnown RBP15.43■□□□□ 0.06
CTNND1-238ENST00000534647 CNBD1Q8NA66 436 aa15.43■□□□□ 0.06
CTNND1-238ENST00000534647 SCN7AQ01118 1682 aa15.43■□□□□ 0.06
CTNND1-238ENST00000534647 KLRG2A4D1S0 409 aaPredicted RBP15.42■□□□□ 0.06
CTNND1-238ENST00000534647 ST5P78524 1137 aa15.42■□□□□ 0.06
CTNND1-238ENST00000534647 ERFEQ4G0M1 354 aa15.42■□□□□ 0.06
CTNND1-238ENST00000534647 MASTLQ96GX5 879 aa15.42■□□□□ 0.06
CTNND1-238ENST00000534647 ZNF330Q9Y3S2 320 aaPredicted RBP15.42■□□□□ 0.06
CTNND1-238ENST00000534647 ANKRD31Q8N7Z5 1873 aa15.42■□□□□ 0.06
CTNND1-238ENST00000534647 PRPF40BQ6NWY9 871 aaKnown RBP15.4■□□□□ 0.06
CTNND1-238ENST00000534647 CCDC24Q8N4L8 307 aa15.4■□□□□ 0.06
CTNND1-238ENST00000534647 C7orf43Q8WVR3 580 aa15.4■□□□□ 0.06
CTNND1-238ENST00000534647 RTF1Q92541 710 aaKnown RBP15.4■□□□□ 0.06
CTNND1-238ENST00000534647 TAOK3Q9H2K8 898 aa15.4■□□□□ 0.06
CTNND1-238ENST00000534647 ZNF652Q9Y2D9 606 aa15.4■□□□□ 0.06
CTNND1-238ENST00000534647 U2AF1L5P0DN76 240 aaPredicted RBP15.39■□□□□ 0.05
CTNND1-238ENST00000534647 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
CTNND1-238ENST00000534647 U2AF1Q01081 240 aaKnown RBP eCLIP15.39■□□□□ 0.05
CTNND1-238ENST00000534647 FER1L6Q2WGJ9 1857 aa15.38■□□□□ 0.05
CTNND1-238ENST00000534647 NPHP1O15259 732 aa15.38■□□□□ 0.05
CTNND1-238ENST00000534647 CNGB1Q14028 1251 aaPredicted RBP15.38■□□□□ 0.05
CTNND1-238ENST00000534647 TPTE2Q6XPS3 522 aa15.38■□□□□ 0.05
CTNND1-238ENST00000534647 MCM10Q7L590 875 aa15.38■□□□□ 0.05
CTNND1-238ENST00000534647 NBPF5PQ86XG9 351 aaPredicted RBP15.38■□□□□ 0.05
CTNND1-238ENST00000534647 TIAM2Q8IVF5 1701 aa15.37■□□□□ 0.05
CTNND1-238ENST00000534647 PRAMEF22A3QJZ6 481 aa15.37■□□□□ 0.05
CTNND1-238ENST00000534647 NBPF26B4DH59 902 aa15.37■□□□□ 0.05
CTNND1-238ENST00000534647 NPR1P16066 1061 aa15.37■□□□□ 0.05
CTNND1-238ENST00000534647 TAF7Q15545 349 aaPredicted RBP15.37■□□□□ 0.05
CTNND1-238ENST00000534647 COL13A1Q5TAT6 717 aaPredicted RBP15.37■□□□□ 0.05
CTNND1-238ENST00000534647 NBPF10Q6P3W6 841 aaKnown RBP15.37■□□□□ 0.05
CTNND1-238ENST00000534647 NBPF15Q8N660 670 aa15.37■□□□□ 0.05
CTNND1-238ENST00000534647 CCDC88AQ3V6T2 1871 aa15.36■□□□□ 0.05
CTNND1-238ENST00000534647 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
CTNND1-238ENST00000534647 L3MBTL3Q96JM7 780 aaPredicted RBP15.36■□□□□ 0.05
CTNND1-238ENST00000534647 DICER1Q9UPY3 1922 aaKnown RBP15.36■□□□□ 0.05
CTNND1-238ENST00000534647 COL11A2P13942 1736 aaPredicted RBP15.36■□□□□ 0.05
CTNND1-238ENST00000534647 BCORQ6W2J9 1755 aa15.36■□□□□ 0.05
CTNND1-238ENST00000534647 DDNO94850 711 aaPredicted RBP15.35■□□□□ 0.05
CTNND1-238ENST00000534647 PIP4K2AP48426 406 aaPredicted RBP15.35■□□□□ 0.05
CTNND1-238ENST00000534647 SLX4Q8IY92 1834 aa15.34■□□□□ 0.05
CTNND1-238ENST00000534647 IQCA1LA6NCM1 817 aa15.34■□□□□ 0.05
CTNND1-238ENST00000534647 CCDC93Q567U6 631 aa15.34■□□□□ 0.05
CTNND1-238ENST00000534647 RTKN2Q8IZC4 609 aa15.34■□□□□ 0.05
CTNND1-238ENST00000534647 CREBZFQ9NS37 354 aa15.34■□□□□ 0.05
CTNND1-238ENST00000534647 NIP7Q9Y221 180 aaKnown RBP eCLIP15.34■□□□□ 0.05
CTNND1-238ENST00000534647 ALDH1B1P30837 517 aa15.33■□□□□ 0.04
CTNND1-238ENST00000534647 FKBP4Q02790 459 aaKnown RBP eCLIP15.33■□□□□ 0.04
CTNND1-238ENST00000534647 DCTN1Q14203 1278 aa15.33■□□□□ 0.04
CTNND1-238ENST00000534647 PNISRQ8TF01 805 aaKnown RBP15.33■□□□□ 0.04
CTNND1-238ENST00000534647 ARFGEF2Q9Y6D5 1785 aa15.32■□□□□ 0.04
CTNND1-238ENST00000534647 ERVV-1B6SEH8 477 aa15.32■□□□□ 0.04
CTNND1-238ENST00000534647 HLFQ16534 295 aa15.31■□□□□ 0.04
CTNND1-238ENST00000534647 CRY2Q49AN0 593 aa15.31■□□□□ 0.04
CTNND1-238ENST00000534647 LDHDQ86WU2 507 aa15.31■□□□□ 0.04
CTNND1-238ENST00000534647 HSPA1AP0DMV8 641 aaKnown RBP15.3■□□□□ 0.04
CTNND1-238ENST00000534647 HSPA1BP0DMV9 641 aaKnown RBP15.3■□□□□ 0.04
CTNND1-238ENST00000534647 PASKQ96RG2 1323 aa15.3■□□□□ 0.04
CTNND1-238ENST00000534647 TAF1DQ9H5J8 278 aaPredicted RBP15.3■□□□□ 0.04
CTNND1-238ENST00000534647 FZD9O00144 591 aa15.29■□□□□ 0.04
CTNND1-238ENST00000534647 NEFMP07197 916 aa15.29■□□□□ 0.04
CTNND1-238ENST00000534647 POTEIP0CG38 1075 aa15.29■□□□□ 0.04
CTNND1-238ENST00000534647 POTEJP0CG39 1038 aa15.29■□□□□ 0.04
CTNND1-238ENST00000534647 GRIPAP1Q4V328 841 aa15.29■□□□□ 0.04
CTNND1-238ENST00000534647 CC2D2BQ6DHV5 1058 aa15.29■□□□□ 0.04
CTNND1-238ENST00000534647 TNS4Q8IZW8 715 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms