RNA–Protein interactions for RNA: ENST00000534590.5

PSMD13-214, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5

Gene PSMD13, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-214ENST00000534590 PRKAR2BP31323 418 aa13.11□□□□□ -0.31
PSMD13-214ENST00000534590 PRPF40BQ6NWY9 871 aaKnown RBP13.11□□□□□ -0.31
PSMD13-214ENST00000534590 CNKSR1Q969H4 720 aa13.11□□□□□ -0.31
PSMD13-214ENST00000534590 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
PSMD13-214ENST00000534590 UBR2Q8IWV8 1755 aa13.11□□□□□ -0.31
PSMD13-214ENST00000534590 PCNTO95613 3336 aa13.11□□□□□ -0.31
PSMD13-214ENST00000534590 SRGNP10124 158 aa13.1□□□□□ -0.31
PSMD13-214ENST00000534590 CHADLQ6NUI6 762 aa13.1□□□□□ -0.31
PSMD13-214ENST00000534590 NBPF5PQ86XG9 351 aaPredicted RBP13.1□□□□□ -0.31
PSMD13-214ENST00000534590 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
PSMD13-214ENST00000534590 SLX4Q8IY92 1834 aa13.09□□□□□ -0.31
PSMD13-214ENST00000534590 COL11A2P13942 1736 aaPredicted RBP13.09□□□□□ -0.31
PSMD13-214ENST00000534590 STYK1Q6J9G0 422 aa13.09□□□□□ -0.31
PSMD13-214ENST00000534590 OLFM4Q6UX06 510 aa13.09□□□□□ -0.31
PSMD13-214ENST00000534590 MASTLQ96GX5 879 aa13.09□□□□□ -0.31
PSMD13-214ENST00000534590 DCTN1Q14203 1278 aa13.08□□□□□ -0.32
PSMD13-214ENST00000534590 EAPPQ56P03 285 aaPredicted RBP13.08□□□□□ -0.32
PSMD13-214ENST00000534590 MCM10Q7L590 875 aa13.08□□□□□ -0.32
PSMD13-214ENST00000534590 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
PSMD13-214ENST00000534590 FER1L6Q2WGJ9 1857 aa13.08□□□□□ -0.32
PSMD13-214ENST00000534590 NGEFQ8N5V2 710 aa13.07□□□□□ -0.32
PSMD13-214ENST00000534590 RSPH6AQ9H0K4 717 aa13.07□□□□□ -0.32
PSMD13-214ENST00000534590 ZNF277Q9NRM2 450 aaPredicted RBP13.07□□□□□ -0.32
PSMD13-214ENST00000534590 COL3A1P02461 1466 aaPredicted RBP13.07□□□□□ -0.32
PSMD13-214ENST00000534590 SCN7AQ01118 1682 aa13.06□□□□□ -0.32
PSMD13-214ENST00000534590 DICER1Q9UPY3 1922 aaKnown RBP13.06□□□□□ -0.32
PSMD13-214ENST00000534590 U2AF1L5P0DN76 240 aaPredicted RBP13.06□□□□□ -0.32
PSMD13-214ENST00000534590 U2AF1Q01081 240 aaKnown RBP eCLIP13.06□□□□□ -0.32
PSMD13-214ENST00000534590 RTF1Q92541 710 aaKnown RBP13.06□□□□□ -0.32
PSMD13-214ENST00000534590 CFAP53Q96M91 514 aa13.06□□□□□ -0.32
PSMD13-214ENST00000534590 CREBZFQ9NS37 354 aa13.06□□□□□ -0.32
PSMD13-214ENST00000534590 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
PSMD13-214ENST00000534590 NIP7Q9Y221 180 aaKnown RBP eCLIP13.06□□□□□ -0.32
PSMD13-214ENST00000534590 LTBP3Q9NS15 1303 aa13.06□□□□□ -0.32
PSMD13-214ENST00000534590 SNRPA1P09661 255 aaKnown RBP13.05□□□□□ -0.32
PSMD13-214ENST00000534590 GTF2E1P29083 439 aaPredicted RBP13.05□□□□□ -0.32
PSMD13-214ENST00000534590 CCDC93Q567U6 631 aa13.05□□□□□ -0.32
PSMD13-214ENST00000534590 SOGA3Q5TF21 947 aa13.05□□□□□ -0.32
PSMD13-214ENST00000534590 TAF1DQ9H5J8 278 aaPredicted RBP13.05□□□□□ -0.32
PSMD13-214ENST00000534590 ZNF652Q9Y2D9 606 aa13.05□□□□□ -0.32
PSMD13-214ENST00000534590 CEMIPQ8WUJ3 1361 aa13.05□□□□□ -0.32
PSMD13-214ENST00000534590 SIPA1L3O60292 1781 aaPredicted RBP13.04□□□□□ -0.32
PSMD13-214ENST00000534590 NBPF26B4DH59 902 aa13.04□□□□□ -0.32
PSMD13-214ENST00000534590 NPR1P16066 1061 aa13.04□□□□□ -0.32
PSMD13-214ENST00000534590 NBPF10Q6P3W6 841 aaKnown RBP13.04□□□□□ -0.32
PSMD13-214ENST00000534590 TPTE2Q6XPS3 522 aa13.04□□□□□ -0.32
PSMD13-214ENST00000534590 NBPF15Q8N660 670 aa13.04□□□□□ -0.32
PSMD13-214ENST00000534590 NUDCQ9Y266 331 aa13.04□□□□□ -0.32
PSMD13-214ENST00000534590 ZNF541Q9H0D2 1346 aa13.04□□□□□ -0.32
PSMD13-214ENST00000534590 IQCA1LA6NCM1 817 aa13.03□□□□□ -0.32
PSMD13-214ENST00000534590 FOXN1O15353 648 aa13.03□□□□□ -0.32
PSMD13-214ENST00000534590 FKBP4Q02790 459 aaKnown RBP eCLIP13.03□□□□□ -0.32
PSMD13-214ENST00000534590 HLFQ16534 295 aa13.03□□□□□ -0.32
PSMD13-214ENST00000534590 CLEC4GQ6UXB4 293 aa13.03□□□□□ -0.32
PSMD13-214ENST00000534590 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
PSMD13-214ENST00000534590 SYNE4Q8N205 404 aa13.03□□□□□ -0.32
PSMD13-214ENST00000534590 C7orf43Q8WVR3 580 aa13.03□□□□□ -0.32
PSMD13-214ENST00000534590 TCERG1O14776 1098 aaKnown RBP13.02□□□□□ -0.33
PSMD13-214ENST00000534590 HACL1Q9UJ83 578 aa13.02□□□□□ -0.33
PSMD13-214ENST00000534590 EPHX2P34913 555 aa13.01□□□□□ -0.33
PSMD13-214ENST00000534590 VEGFBP49765 207 aa13.01□□□□□ -0.33
PSMD13-214ENST00000534590 MAP1SQ66K74 1059 aaPredicted RBP13.01□□□□□ -0.33
PSMD13-214ENST00000534590 NUTM1Q86Y26 1132 aa13.01□□□□□ -0.33
PSMD13-214ENST00000534590 RRP7AQ9Y3A4 280 aaKnown RBP13.01□□□□□ -0.33
PSMD13-214ENST00000534590 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
PSMD13-214ENST00000534590 RNF123Q5XPI4 1314 aa13.01□□□□□ -0.33
PSMD13-214ENST00000534590 NPC1L1Q9UHC9 1359 aa13.01□□□□□ -0.33
PSMD13-214ENST00000534590 BCORQ6W2J9 1755 aa13□□□□□ -0.33
PSMD13-214ENST00000534590 CNTNAP1P78357 1384 aa13□□□□□ -0.33
PSMD13-214ENST00000534590 PASKQ96RG2 1323 aa13□□□□□ -0.33
PSMD13-214ENST00000534590 TMEM88BA6NKF7 163 aa13□□□□□ -0.33
PSMD13-214ENST00000534590 ITGBL1O95965 494 aaPredicted RBP13□□□□□ -0.33
PSMD13-214ENST00000534590 PPP2R1AP30153 589 aa13□□□□□ -0.33
PSMD13-214ENST00000534590 IARSP41252 1262 aaKnown RBP13□□□□□ -0.33
PSMD13-214ENST00000534590 RTKN2Q8IZC4 609 aa13□□□□□ -0.33
PSMD13-214ENST00000534590 AIDAQ96BJ3 306 aa13□□□□□ -0.33
PSMD13-214ENST00000534590 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
PSMD13-214ENST00000534590 GPTP24298 496 aa12.99□□□□□ -0.33
PSMD13-214ENST00000534590 ALDH1B1P30837 517 aa12.99□□□□□ -0.33
PSMD13-214ENST00000534590 TAF7Q15545 349 aaPredicted RBP12.99□□□□□ -0.33
PSMD13-214ENST00000534590 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
PSMD13-214ENST00000534590 KLRG2A4D1S0 409 aaPredicted RBP12.98□□□□□ -0.33
PSMD13-214ENST00000534590 MYL6BP14649 208 aa12.98□□□□□ -0.33
PSMD13-214ENST00000534590 SLC51AQ86UW1 340 aa12.98□□□□□ -0.33
PSMD13-214ENST00000534590 JDP2Q8WYK2 163 aa12.98□□□□□ -0.33
PSMD13-214ENST00000534590 ARFGEF2Q9Y6D5 1785 aa12.97□□□□□ -0.33
PSMD13-214ENST00000534590 LBX1P52954 281 aa12.97□□□□□ -0.33
PSMD13-214ENST00000534590 FMR1Q06787 632 aaKnown RBP eCLIP12.97□□□□□ -0.33
PSMD13-214ENST00000534590 GRM1Q13255 1194 aa12.97□□□□□ -0.33
PSMD13-214ENST00000534590 TTLL7Q6ZT98 887 aa12.97□□□□□ -0.33
PSMD13-214ENST00000534590 THUMPD2Q9BTF0 503 aaKnown RBP12.97□□□□□ -0.33
PSMD13-214ENST00000534590 ZBTB3Q9H5J0 574 aa12.97□□□□□ -0.33
PSMD13-214ENST00000534590 ABT1Q9ULW3 272 aaKnown RBP12.97□□□□□ -0.33
PSMD13-214ENST00000534590 SCN4AP35499 1836 aa12.97□□□□□ -0.33
PSMD13-214ENST00000534590 ABCC12Q96J65 1359 aa12.96□□□□□ -0.33
PSMD13-214ENST00000534590 FZD9O00144 591 aa12.96□□□□□ -0.33
PSMD13-214ENST00000534590 CTCFP49711 727 aaPredicted RBP12.96□□□□□ -0.33
PSMD13-214ENST00000534590 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.33
PSMD13-214ENST00000534590 DEFB115Q30KQ5 88 aa12.96□□□□□ -0.33
PSMD13-214ENST00000534590 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms