RNA–Protein interactions for RNA: ENST00000534533.5

CTSH-217, Transcript of cathepsin H, human

TSL 3

Gene CTSH, Length 836 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSH-217	ENST00000534533	ARFGEF1	Q9Y6D6	1849 aa		13.65	□□□□□ -0.22
CTSH-217	ENST00000534533	PLEKHF1	Q96S99	279 aa		13.65	□□□□□ -0.22
CTSH-217	ENST00000534533	BRCA1	P38398	1863 aa	Known RBP	13.64	□□□□□ -0.23
CTSH-217	ENST00000534533	NBPF26	B4DH59	902 aa		13.64	□□□□□ -0.23
CTSH-217	ENST00000534533	SRGN	P10124	158 aa		13.64	□□□□□ -0.23
CTSH-217	ENST00000534533	ERFE	Q4G0M1	354 aa		13.64	□□□□□ -0.23
CTSH-217	ENST00000534533	NBPF10	Q6P3W6	841 aa	Known RBP	13.64	□□□□□ -0.23
CTSH-217	ENST00000534533	NGEF	Q8N5V2	710 aa		13.64	□□□□□ -0.23
CTSH-217	ENST00000534533	NBPF15	Q8N660	670 aa		13.64	□□□□□ -0.23
CTSH-217	ENST00000534533	RRP7A	Q9Y3A4	280 aa	Known RBP	13.64	□□□□□ -0.23
CTSH-217	ENST00000534533	NPR1	P16066	1061 aa		13.63	□□□□□ -0.23
CTSH-217	ENST00000534533	SMC1B	Q8NDV3	1235 aa		13.63	□□□□□ -0.23
CTSH-217	ENST00000534533	AFDN	P55196	1824 aa	Known RBP	13.62	□□□□□ -0.23
CTSH-217	ENST00000534533	NRXN2	Q9P2S2	1712 aa		13.62	□□□□□ -0.23
CTSH-217	ENST00000534533	FAM177B	A6PVY3	158 aa		13.62	□□□□□ -0.23
CTSH-217	ENST00000534533	ERVV-1	B6SEH8	477 aa		13.62	□□□□□ -0.23
CTSH-217	ENST00000534533	NFKBIE	O00221	500 aa		13.62	□□□□□ -0.23
CTSH-217	ENST00000534533	ALDH1B1	P30837	517 aa		13.62	□□□□□ -0.23
CTSH-217	ENST00000534533	RIPK4	P57078	832 aa		13.62	□□□□□ -0.23
CTSH-217	ENST00000534533	EIF4A1	P60842	406 aa	Known RBP	13.62	□□□□□ -0.23
CTSH-217	ENST00000534533	KIF6	Q6ZMV9	814 aa		13.62	□□□□□ -0.23
CTSH-217	ENST00000534533	NYX	Q9GZU5	481 aa		13.62	□□□□□ -0.23
CTSH-217	ENST00000534533	TAOK3	Q9H2K8	898 aa		13.62	□□□□□ -0.23
CTSH-217	ENST00000534533	SIPA1L3	O60292	1781 aa	Predicted RBP	13.62	□□□□□ -0.23
CTSH-217	ENST00000534533	LMOD3	Q0VAK6	560 aa		13.61	□□□□□ -0.23
CTSH-217	ENST00000534533	DDX10	Q13206	875 aa	Known RBP	13.61	□□□□□ -0.23
CTSH-217	ENST00000534533	PRPF40B	Q6NWY9	871 aa	Known RBP	13.61	□□□□□ -0.23
CTSH-217	ENST00000534533	MYL6B	P14649	208 aa		13.6	□□□□□ -0.23
CTSH-217	ENST00000534533	HLF	Q16534	295 aa		13.6	□□□□□ -0.23
CTSH-217	ENST00000534533	THUMPD2	Q9BTF0	503 aa	Known RBP	13.6	□□□□□ -0.23
CTSH-217	ENST00000534533	BABAM1	Q9NWV8	329 aa		13.6	□□□□□ -0.23
CTSH-217	ENST00000534533	TSPYL4	Q9UJ04	414 aa		13.6	□□□□□ -0.23
CTSH-217	ENST00000534533	LTBP3	Q9NS15	1303 aa		13.6	□□□□□ -0.23
CTSH-217	ENST00000534533	KLRG2	A4D1S0	409 aa	Predicted RBP	13.59	□□□□□ -0.23
CTSH-217	ENST00000534533	PRELP	P51888	382 aa		13.59	□□□□□ -0.23
CTSH-217	ENST00000534533	CCDC93	Q567U6	631 aa		13.59	□□□□□ -0.23
CTSH-217	ENST00000534533	RTKN2	Q8IZC4	609 aa		13.59	□□□□□ -0.23
CTSH-217	ENST00000534533	MAP3K15	Q6ZN16	1313 aa		13.59	□□□□□ -0.23
CTSH-217	ENST00000534533	ERBB4	Q15303	1308 aa		13.58	□□□□□ -0.24
CTSH-217	ENST00000534533	EIF2S2	P20042	333 aa	Known RBP	13.57	□□□□□ -0.24
CTSH-217	ENST00000534533	TMPO	P42166	694 aa	Known RBP	13.57	□□□□□ -0.24
CTSH-217	ENST00000534533	WDR43	Q15061	677 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
CTSH-217	ENST00000534533	DNAJC5G	Q8N7S2	189 aa		13.57	□□□□□ -0.24
CTSH-217	ENST00000534533	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.57	□□□□□ -0.24
CTSH-217	ENST00000534533	SBF1	O95248	1867 aa		13.57	□□□□□ -0.24
CTSH-217	ENST00000534533	NEUROD2	Q15784	382 aa		13.56	□□□□□ -0.24
CTSH-217	ENST00000534533	CC2D2B	Q6DHV5	1058 aa		13.56	□□□□□ -0.24
CTSH-217	ENST00000534533	TTLL7	Q6ZT98	887 aa		13.56	□□□□□ -0.24
CTSH-217	ENST00000534533	PPP1R42	Q7Z4L9	355 aa		13.56	□□□□□ -0.24
CTSH-217	ENST00000534533	C7orf43	Q8WVR3	580 aa		13.56	□□□□□ -0.24
CTSH-217	ENST00000534533	RPGR	Q92834	1020 aa	Known RBP	13.56	□□□□□ -0.24
CTSH-217	ENST00000534533	TMX4	Q9H1E5	349 aa	Predicted RBP	13.56	□□□□□ -0.24
CTSH-217	ENST00000534533	ZBTB3	Q9H5J0	574 aa		13.56	□□□□□ -0.24
CTSH-217	ENST00000534533	GPT	P24298	496 aa		13.55	□□□□□ -0.24
CTSH-217	ENST00000534533	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
CTSH-217	ENST00000534533	GRIPAP1	Q4V328	841 aa		13.55	□□□□□ -0.24
CTSH-217	ENST00000534533	PARP10	Q53GL7	1025 aa		13.55	□□□□□ -0.24
CTSH-217	ENST00000534533	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.55	□□□□□ -0.24
CTSH-217	ENST00000534533	RUNDC1	Q96C34	613 aa		13.55	□□□□□ -0.24
CTSH-217	ENST00000534533	SCN7A	Q01118	1682 aa		13.55	□□□□□ -0.24
CTSH-217	ENST00000534533	IQCA1L	A6NCM1	817 aa		13.54	□□□□□ -0.24
CTSH-217	ENST00000534533	DDN	O94850	711 aa	Predicted RBP	13.54	□□□□□ -0.24
CTSH-217	ENST00000534533	NUTM1	Q86Y26	1132 aa		13.54	□□□□□ -0.24
CTSH-217	ENST00000534533	KLRG1	Q96E93	195 aa		13.54	□□□□□ -0.24
CTSH-217	ENST00000534533	RBM17	Q96I25	401 aa	Known RBP	13.54	□□□□□ -0.24
CTSH-217	ENST00000534533	NLRP3	Q96P20	1036 aa		13.54	□□□□□ -0.24
CTSH-217	ENST00000534533	DLEC1	Q9Y238	1755 aa		13.53	□□□□□ -0.24
CTSH-217	ENST00000534533	POTEC	B2RU33	542 aa		13.53	□□□□□ -0.24
CTSH-217	ENST00000534533	IFFO2	Q5TF58	517 aa		13.53	□□□□□ -0.24
CTSH-217	ENST00000534533	SUSD4	Q5VX71	490 aa		13.53	□□□□□ -0.24
CTSH-217	ENST00000534533	ZNF34	Q8IZ26	560 aa		13.53	□□□□□ -0.24
CTSH-217	ENST00000534533	SYNE4	Q8N205	404 aa		13.53	□□□□□ -0.24
CTSH-217	ENST00000534533	JDP2	Q8WYK2	163 aa		13.53	□□□□□ -0.24
CTSH-217	ENST00000534533	LAS1L	Q9Y4W2	734 aa	Known RBP	13.53	□□□□□ -0.24
CTSH-217	ENST00000534533	HTRA3	P83110	453 aa		13.52	□□□□□ -0.25
CTSH-217	ENST00000534533	CRY2	Q49AN0	593 aa		13.52	□□□□□ -0.25
CTSH-217	ENST00000534533	HSP90AB3P	Q58FF7	597 aa		13.52	□□□□□ -0.25
CTSH-217	ENST00000534533	CCDC146	Q8IYE0	955 aa		13.52	□□□□□ -0.25
CTSH-217	ENST00000534533	UTP14A	Q9BVJ6	771 aa	Known RBP	13.52	□□□□□ -0.25
CTSH-217	ENST00000534533	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.52	□□□□□ -0.25
CTSH-217	ENST00000534533	ANKRD31	Q8N7Z5	1873 aa		13.52	□□□□□ -0.25
CTSH-217	ENST00000534533	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.51	□□□□□ -0.25
CTSH-217	ENST00000534533	HOXA10	P31260	410 aa	Predicted RBP	13.51	□□□□□ -0.25
CTSH-217	ENST00000534533	IARS	P41252	1262 aa	Known RBP	13.51	□□□□□ -0.25
CTSH-217	ENST00000534533	AIMP1	Q12904	312 aa	Known RBP	13.51	□□□□□ -0.25
CTSH-217	ENST00000534533	CHADL	Q6NUI6	762 aa		13.51	□□□□□ -0.25
CTSH-217	ENST00000534533	CRAMP1	Q96RY5	1269 aa		13.51	□□□□□ -0.25
CTSH-217	ENST00000534533	SLX4	Q8IY92	1834 aa		13.5	□□□□□ -0.25
CTSH-217	ENST00000534533	CHL1	O00533	1208 aa		13.5	□□□□□ -0.25
CTSH-217	ENST00000534533	PDIA6	Q15084	440 aa		13.5	□□□□□ -0.25
CTSH-217	ENST00000534533	COPS6	Q7L5N1	327 aa		13.5	□□□□□ -0.25
CTSH-217	ENST00000534533	NECTIN2	Q92692	538 aa		13.5	□□□□□ -0.25
CTSH-217	ENST00000534533	PSMD1	Q99460	953 aa		13.5	□□□□□ -0.25
CTSH-217	ENST00000534533	BCOR	Q6W2J9	1755 aa		13.5	□□□□□ -0.25
CTSH-217	ENST00000534533	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.49	□□□□□ -0.25
CTSH-217	ENST00000534533	CCDC88A	Q3V6T2	1871 aa		13.49	□□□□□ -0.25
CTSH-217	ENST00000534533	EIF6	P56537	245 aa	Known RBP	13.49	□□□□□ -0.25
CTSH-217	ENST00000534533	SLC10A5	Q5PT55	438 aa		13.49	□□□□□ -0.25
CTSH-217	ENST00000534533	OLFM4	Q6UX06	510 aa		13.49	□□□□□ -0.25
CTSH-217	ENST00000534533	JMY	Q8N9B5	988 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 79 ms