RNA–Protein interactions for RNA: ENST00000534270.1

RECQL4-206, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-206ENST00000534270 NIP7Q9Y221 180 aaKnown RBP eCLIP28.36■■■□□ 2.13
RECQL4-206ENST00000534270 NFKBIEO00221 500 aa28.35■■■□□ 2.13
RECQL4-206ENST00000534270 TMPOP42166 694 aaKnown RBP28.35■■■□□ 2.13
RECQL4-206ENST00000534270 ST5P78524 1137 aa28.35■■■□□ 2.13
RECQL4-206ENST00000534270 ZNF652Q9Y2D9 606 aa28.35■■■□□ 2.13
RECQL4-206ENST00000534270 BCORQ6W2J9 1755 aa28.34■■■□□ 2.13
RECQL4-206ENST00000534270 DLEC1Q9Y238 1755 aa28.34■■■□□ 2.13
RECQL4-206ENST00000534270 SBF1O95248 1867 aa28.34■■■□□ 2.13
RECQL4-206ENST00000534270 NEUROD2Q15784 382 aa28.34■■■□□ 2.13
RECQL4-206ENST00000534270 KDM3BQ7LBC6 1761 aa28.33■■■□□ 2.13
RECQL4-206ENST00000534270 SRGNP10124 158 aa28.33■■■□□ 2.13
RECQL4-206ENST00000534270 MYL6BP14649 208 aa28.33■■■□□ 2.13
RECQL4-206ENST00000534270 HSPA6P17066 643 aa28.33■■■□□ 2.13
RECQL4-206ENST00000534270 TTLL7Q6ZT98 887 aa28.33■■■□□ 2.13
RECQL4-206ENST00000534270 TSPYL4Q9UJ04 414 aa28.33■■■□□ 2.13
RECQL4-206ENST00000534270 LMNB1P20700 586 aa28.32■■■□□ 2.12
RECQL4-206ENST00000534270 RRAGCQ9HB90 399 aa28.32■■■□□ 2.12
RECQL4-206ENST00000534270 PDZRN3Q9UPQ7 1066 aa28.32■■■□□ 2.12
RECQL4-206ENST00000534270 COL11A2P13942 1736 aaPredicted RBP28.31■■■□□ 2.12
RECQL4-206ENST00000534270 TOMM70O94826 608 aa28.3■■■□□ 2.12
RECQL4-206ENST00000534270 TPTE2Q6XPS3 522 aa28.3■■■□□ 2.12
RECQL4-206ENST00000534270 STYK1Q6J9G0 422 aa28.29■■■□□ 2.12
RECQL4-206ENST00000534270 MASTLQ96GX5 879 aa28.29■■■□□ 2.12
RECQL4-206ENST00000534270 ADAMTS8Q9UP79 889 aa28.29■■■□□ 2.12
RECQL4-206ENST00000534270 CNKSR1Q969H4 720 aa28.28■■■□□ 2.12
RECQL4-206ENST00000534270 KDM2BQ8NHM5 1336 aa28.27■■■□□ 2.12
RECQL4-206ENST00000534270 EIF2S2P20042 333 aaKnown RBP28.27■■■□□ 2.12
RECQL4-206ENST00000534270 PRPF40BQ6NWY9 871 aaKnown RBP28.27■■■□□ 2.12
RECQL4-206ENST00000534270 ZBTB3Q9H5J0 574 aa28.26■■■□□ 2.11
RECQL4-206ENST00000534270 SLX4Q8IY92 1834 aa28.25■■■□□ 2.11
RECQL4-206ENST00000534270 MAP3K15Q6ZN16 1313 aa28.25■■■□□ 2.11
RECQL4-206ENST00000534270 RGL2O15211 777 aa28.25■■■□□ 2.11
RECQL4-206ENST00000534270 ANXA1P04083 346 aa28.25■■■□□ 2.11
RECQL4-206ENST00000534270 PRKRIP1Q9H875 184 aaPredicted RBP28.25■■■□□ 2.11
RECQL4-206ENST00000534270 TRIM35Q9UPQ4 493 aa28.25■■■□□ 2.11
RECQL4-206ENST00000534270 LAMB4A4D0S4 1761 aa28.24■■■□□ 2.11
RECQL4-206ENST00000534270 KLRG2A4D1S0 409 aaPredicted RBP28.24■■■□□ 2.11
RECQL4-206ENST00000534270 ERVV-1B6SEH8 477 aa28.24■■■□□ 2.11
RECQL4-206ENST00000534270 GPTP24298 496 aa28.24■■■□□ 2.11
RECQL4-206ENST00000534270 WDR43Q15061 677 aaKnown RBP eCLIP28.24■■■□□ 2.11
RECQL4-206ENST00000534270 PDIA6Q15084 440 aa28.24■■■□□ 2.11
RECQL4-206ENST00000534270 NUTM1Q86Y26 1132 aa28.24■■■□□ 2.11
RECQL4-206ENST00000534270 RUNDC1Q96C34 613 aa28.24■■■□□ 2.11
RECQL4-206ENST00000534270 PROSER3Q2NL68 480 aa28.23■■■□□ 2.11
RECQL4-206ENST00000534270 KIF6Q6ZMV9 814 aa28.23■■■□□ 2.11
RECQL4-206ENST00000534270 NECTIN2Q92692 538 aa28.23■■■□□ 2.11
RECQL4-206ENST00000534270 GLTPD2A6NH11 291 aa28.22■■■□□ 2.11
RECQL4-206ENST00000534270 GTF2E1P29083 439 aaPredicted RBP28.22■■■□□ 2.11
RECQL4-206ENST00000534270 KRT24Q2M2I5 525 aa28.22■■■□□ 2.11
RECQL4-206ENST00000534270 CCDC88AQ3V6T2 1871 aa28.22■■■□□ 2.11
RECQL4-206ENST00000534270 OLFM4Q6UX06 510 aa28.22■■■□□ 2.11
RECQL4-206ENST00000534270 C16orf71Q8IYS4 520 aaPredicted RBP28.22■■■□□ 2.11
RECQL4-206ENST00000534270 C7orf43Q8WVR3 580 aa28.22■■■□□ 2.11
RECQL4-206ENST00000534270 LAS1LQ9Y4W2 734 aaKnown RBP28.22■■■□□ 2.11
RECQL4-206ENST00000534270 NPR1P16066 1061 aa28.21■■■□□ 2.11
RECQL4-206ENST00000534270 LMOD3Q0VAK6 560 aa28.21■■■□□ 2.11
RECQL4-206ENST00000534270 ERFEQ4G0M1 354 aa28.21■■■□□ 2.11
RECQL4-206ENST00000534270 LRP10Q7Z4F1 713 aa28.21■■■□□ 2.11
RECQL4-206ENST00000534270 SUSD4Q5VX71 490 aa28.2■■■□□ 2.1
RECQL4-206ENST00000534270 RBM46Q8TBY0 533 aaKnown RBP28.2■■■□□ 2.1
RECQL4-206ENST00000534270 UBN2Q6ZU65 1347 aa28.19■■■□□ 2.1
RECQL4-206ENST00000534270 TAOK3Q9H2K8 898 aa28.19■■■□□ 2.1
RECQL4-206ENST00000534270 BABAM1Q9NWV8 329 aa28.19■■■□□ 2.1
RECQL4-206ENST00000534270 ZC3H4Q9UPT8 1303 aaKnown RBP28.18■■■□□ 2.1
RECQL4-206ENST00000534270 CHL1O00533 1208 aa28.18■■■□□ 2.1
RECQL4-206ENST00000534270 ABCC12Q96J65 1359 aa28.18■■■□□ 2.1
RECQL4-206ENST00000534270 CACNA1SQ13698 1873 aa28.17■■■□□ 2.1
RECQL4-206ENST00000534270 ZNF34Q8IZ26 560 aa28.17■■■□□ 2.1
RECQL4-206ENST00000534270 FER1L6Q2WGJ9 1857 aa28.17■■■□□ 2.1
RECQL4-206ENST00000534270 ERBB4Q15303 1308 aa28.17■■■□□ 2.1
RECQL4-206ENST00000534270 NUP98P52948 1817 aa28.16■■■□□ 2.1
RECQL4-206ENST00000534270 POTECB2RU33 542 aa28.16■■■□□ 2.1
RECQL4-206ENST00000534270 GIGYF2Q6Y7W6 1299 aaKnown RBP28.15■■■□□ 2.1
RECQL4-206ENST00000534270 NYXQ9GZU5 481 aa28.15■■■□□ 2.1
RECQL4-206ENST00000534270 LTBP3Q9NS15 1303 aa28.15■■■□□ 2.1
RECQL4-206ENST00000534270 HTRA3P83110 453 aa28.14■■■□□ 2.1
RECQL4-206ENST00000534270 VEGFAP15692 232 aaPredicted RBP28.13■■■□□ 2.09
RECQL4-206ENST00000534270 APLP1P51693 650 aa28.13■■■□□ 2.09
RECQL4-206ENST00000534270 AIMP1Q12904 312 aaKnown RBP28.13■■■□□ 2.09
RECQL4-206ENST00000534270 SOGA3Q5TF21 947 aa28.13■■■□□ 2.09
RECQL4-206ENST00000534270 COPS6Q7L5N1 327 aa28.13■■■□□ 2.09
RECQL4-206ENST00000534270 CCDC93Q567U6 631 aa28.12■■■□□ 2.09
RECQL4-206ENST00000534270 C3orf67Q6ZVT6 689 aa28.12■■■□□ 2.09
RECQL4-206ENST00000534270 TNRC6CQ9HCJ0 1690 aaKnown RBP28.11■■■□□ 2.09
RECQL4-206ENST00000534270 NTSR2O95665 410 aa28.11■■■□□ 2.09
RECQL4-206ENST00000534270 CRY2Q49AN0 593 aa28.11■■■□□ 2.09
RECQL4-206ENST00000534270 DPY19L2Q6NUT2 758 aa28.11■■■□□ 2.09
RECQL4-206ENST00000534270 SLC51AQ86UW1 340 aa28.11■■■□□ 2.09
RECQL4-206ENST00000534270 XAGE3Q8WTP9 111 aa28.11■■■□□ 2.09
RECQL4-206ENST00000534270 ZNF277Q9NRM2 450 aaPredicted RBP28.11■■■□□ 2.09
RECQL4-206ENST00000534270 TIAM2Q8IVF5 1701 aa28.1■■■□□ 2.09
RECQL4-206ENST00000534270 DDNO94850 711 aaPredicted RBP28.1■■■□□ 2.09
RECQL4-206ENST00000534270 ALDH1B1P30837 517 aa28.1■■■□□ 2.09
RECQL4-206ENST00000534270 FSTL1Q12841 308 aa28.1■■■□□ 2.09
RECQL4-206ENST00000534270 DNAJC5GQ8N7S2 189 aa28.1■■■□□ 2.09
RECQL4-206ENST00000534270 APAF1O14727 1248 aa28.09■■■□□ 2.09
RECQL4-206ENST00000534270 CCDC184Q52MB2 194 aa28.09■■■□□ 2.09
RECQL4-206ENST00000534270 ZNF428Q96B54 188 aa28.09■■■□□ 2.09
RECQL4-206ENST00000534270 ARFGEF2Q9Y6D5 1785 aa28.08■■■□□ 2.09
RECQL4-206ENST00000534270 FKBP4Q02790 459 aaKnown RBP eCLIP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms