RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 IGFBP4P22692 258 aa7.91□□□□□ -1.14
ITGB1-219ENST00000534049 TNP2Q05952 138 aa7.91□□□□□ -1.14
ITGB1-219ENST00000534049 TBCELQ5QJ74 424 aa7.91□□□□□ -1.14
ITGB1-219ENST00000534049 KLRG1Q96E93 195 aa7.91□□□□□ -1.14
ITGB1-219ENST00000534049 CCDC97Q96F63 343 aaPredicted RBP7.91□□□□□ -1.14
ITGB1-219ENST00000534049 ATAD2Q6PL18 1390 aa7.91□□□□□ -1.14
ITGB1-219ENST00000534049 KHNYNO15037 678 aaKnown RBP7.9□□□□□ -1.14
ITGB1-219ENST00000534049 KCNMA1Q12791 1236 aa7.9□□□□□ -1.14
ITGB1-219ENST00000534049 SLCO4C1Q6ZQN7 724 aa7.9□□□□□ -1.14
ITGB1-219ENST00000534049 PODNQ7Z5L7 613 aa7.9□□□□□ -1.14
ITGB1-219ENST00000534049 NEDD1Q8NHV4 660 aa7.9□□□□□ -1.14
ITGB1-219ENST00000534049 FAM200AQ8TCP9 573 aa7.9□□□□□ -1.14
ITGB1-219ENST00000534049 SCG3Q8WXD2 468 aaKnown RBP7.9□□□□□ -1.14
ITGB1-219ENST00000534049 C2orf49Q9BVC5 232 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-219ENST00000534049 PHACTR1Q9C0D0 580 aa7.9□□□□□ -1.14
ITGB1-219ENST00000534049 SERPINA10Q9UK55 444 aa7.9□□□□□ -1.14
ITGB1-219ENST00000534049 DCDC2BA2VCK2 349 aa7.89□□□□□ -1.15
ITGB1-219ENST00000534049 ELOAQ14241 798 aaKnown RBP7.89□□□□□ -1.15
ITGB1-219ENST00000534049 KANK3Q6NY19 840 aa7.89□□□□□ -1.15
ITGB1-219ENST00000534049 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.89□□□□□ -1.152e-7■■■■■ 139.7
ITGB1-219ENST00000534049 MARK1Q9P0L2 795 aa7.89□□□□□ -1.15
ITGB1-219ENST00000534049 PHF20L1A8MW92 1017 aa7.88□□□□□ -1.15
ITGB1-219ENST00000534049 EFSO43281 561 aa7.88□□□□□ -1.15
ITGB1-219ENST00000534049 FOXO3O43524 673 aa7.88□□□□□ -1.15
ITGB1-219ENST00000534049 C21orf2O43822 256 aa7.88□□□□□ -1.15
ITGB1-219ENST00000534049 ADH6P28332 368 aa7.88□□□□□ -1.15
ITGB1-219ENST00000534049 SWI5Q1ZZU3 235 aa7.88□□□□□ -1.15
ITGB1-219ENST00000534049 LRRC69Q6ZNQ3 347 aa7.88□□□□□ -1.15
ITGB1-219ENST00000534049 ERICH6Q7L0X2 663 aa7.88□□□□□ -1.15
ITGB1-219ENST00000534049 ARXQ96QS3 562 aa7.88□□□□□ -1.15
ITGB1-219ENST00000534049 PIK3R2O00459 728 aa7.87□□□□□ -1.15
ITGB1-219ENST00000534049 CTBSQ01459 385 aa7.87□□□□□ -1.15
ITGB1-219ENST00000534049 NEUROD1Q13562 356 aa7.87□□□□□ -1.15
ITGB1-219ENST00000534049 ALDH16A1Q8IZ83 802 aa7.87□□□□□ -1.15
ITGB1-219ENST00000534049 BEND7Q8N7W2 519 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-219ENST00000534049 C7orf43Q8WVR3 580 aa7.87□□□□□ -1.15
ITGB1-219ENST00000534049 HCN4Q9Y3Q4 1203 aa7.87□□□□□ -1.15
ITGB1-219ENST00000534049 RTN1Q16799 776 aa7.86□□□□□ -1.15
ITGB1-219ENST00000534049 SH3PXD2AQ5TCZ1 1133 aa7.86□□□□□ -1.15
ITGB1-219ENST00000534049 CHMP7Q8WUX9 453 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-219ENST00000534049 VTI1AQ96AJ9 217 aa7.86□□□□□ -1.15
ITGB1-219ENST00000534049 PRR12Q9ULL5 1215 aa7.86□□□□□ -1.15
ITGB1-219ENST00000534049 NOVA2Q9UNW9 492 aaKnown RBP7.86□□□□□ -1.15
ITGB1-219ENST00000534049 NISCHQ9Y2I1 1504 aa7.86□□□□□ -1.15
ITGB1-219ENST00000534049 ACIN1Q9UKV3 1341 aaKnown RBP7.85□□□□□ -1.15
ITGB1-219ENST00000534049 C2CD2LO14523 706 aa7.85□□□□□ -1.15
ITGB1-219ENST00000534049 CD33P20138 364 aa7.85□□□□□ -1.15
ITGB1-219ENST00000534049 WEE1P30291 646 aa7.85□□□□□ -1.15
ITGB1-219ENST00000534049 ZNF468Q5VIY5 522 aaPredicted RBP7.85□□□□□ -1.15
ITGB1-219ENST00000534049 IER5Q5VY09 327 aa7.85□□□□□ -1.15
ITGB1-219ENST00000534049 GALNT6Q8NCL4 622 aa7.85□□□□□ -1.15
ITGB1-219ENST00000534049 EDARADDQ8WWZ3 215 aa7.85□□□□□ -1.15
ITGB1-219ENST00000534049 GGA1Q9UJY5 639 aa7.85□□□□□ -1.15
ITGB1-219ENST00000534049 ATG7O95352 703 aa7.84□□□□□ -1.15
ITGB1-219ENST00000534049 PBXIP1Q96AQ6 731 aa7.84□□□□□ -1.15
ITGB1-219ENST00000534049 SUSD3Q96L08 255 aa7.84□□□□□ -1.15
ITGB1-219ENST00000534049 EFCC1Q9HA90 598 aa7.84□□□□□ -1.15
ITGB1-219ENST00000534049 DNMT3AQ9Y6K1 912 aaPredicted RBP7.84□□□□□ -1.15
ITGB1-219ENST00000534049 EPXP11678 715 aa7.83□□□□□ -1.16
ITGB1-219ENST00000534049 KCNQ4P56696 695 aa7.83□□□□□ -1.16
ITGB1-219ENST00000534049 TMEM151AQ8N4L1 468 aa7.83□□□□□ -1.16
ITGB1-219ENST00000534049 CEP63Q96MT8 703 aa7.83□□□□□ -1.16
ITGB1-219ENST00000534049 TGFBR3LH3BV60 316 aa7.82□□□□□ -1.16
ITGB1-219ENST00000534049 AMPD1P23109 780 aa7.82□□□□□ -1.16
ITGB1-219ENST00000534049 RASSF7Q02833 373 aa7.82□□□□□ -1.16
ITGB1-219ENST00000534049 ALYREFQ86V81 257 aaKnown RBP7.82□□□□□ -1.16
ITGB1-219ENST00000534049 NGLY1Q96IV0 654 aa7.82□□□□□ -1.16
ITGB1-219ENST00000534049 BRD7Q9NPI1 651 aa7.82□□□□□ -1.16
ITGB1-219ENST00000534049 MKL2Q9ULH7 1088 aa7.82□□□□□ -1.16
ITGB1-219ENST00000534049 NEURL1BA8MQ27 555 aa7.81□□□□□ -1.16
ITGB1-219ENST00000534049 SIN3BO75182 1162 aa7.81□□□□□ -1.16
ITGB1-219ENST00000534049 EPB42P16452 691 aa7.81□□□□□ -1.16
ITGB1-219ENST00000534049 TYRO3Q06418 890 aa7.81□□□□□ -1.16
ITGB1-219ENST00000534049 CDCA8Q53HL2 280 aa7.81□□□□□ -1.16
ITGB1-219ENST00000534049 C14orf37Q86TY3 774 aa7.81□□□□□ -1.16
ITGB1-219ENST00000534049 KCNH4Q9UQ05 1017 aa7.81□□□□□ -1.16
ITGB1-219ENST00000534049 GDF11O95390 407 aa7.8□□□□□ -1.16
ITGB1-219ENST00000534049 IRS1P35568 1242 aa7.8□□□□□ -1.16
ITGB1-219ENST00000534049 SRPK2P78362 688 aaKnown RBP7.8□□□□□ -1.16
ITGB1-219ENST00000534049 BTLAQ7Z6A9 289 aa7.8□□□□□ -1.16
ITGB1-219ENST00000534049 MYO19Q96H55 970 aa7.8□□□□□ -1.16
ITGB1-219ENST00000534049 HSH2DQ96JZ2 352 aa7.8□□□□□ -1.16
ITGB1-219ENST00000534049 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.79□□□□□ -1.16
ITGB1-219ENST00000534049 SHISA8B8ZZ34 492 aa7.79□□□□□ -1.16
ITGB1-219ENST00000534049 ALAS2P22557 587 aa7.79□□□□□ -1.16
ITGB1-219ENST00000534049 SPEM2Q0P670 501 aa7.79□□□□□ -1.16
ITGB1-219ENST00000534049 RRAGCQ9HB90 399 aa7.79□□□□□ -1.16
ITGB1-219ENST00000534049 C11orf16Q9NQ32 467 aa7.79□□□□□ -1.16
ITGB1-219ENST00000534049 STRN4Q9NRL3 753 aa7.79□□□□□ -1.16
ITGB1-219ENST00000534049 SFSWAPQ12872 951 aaKnown RBP7.78□□□□□ -1.16
ITGB1-219ENST00000534049 SYT9Q86SS6 491 aa7.78□□□□□ -1.16
ITGB1-219ENST00000534049 COL26A1Q96A83 441 aa7.78□□□□□ -1.16
ITGB1-219ENST00000534049 BTBD6Q96KE9 485 aa7.78□□□□□ -1.16
ITGB1-219ENST00000534049 ZMIZ1Q9ULJ6 1067 aa7.78□□□□□ -1.16
ITGB1-219ENST00000534049 ELOA3CA0A087WX78 387 aaPredicted RBP7.77□□□□□ -1.17
ITGB1-219ENST00000534049 ELOA3DA6NLF2 546 aaPredicted RBP7.77□□□□□ -1.17
ITGB1-219ENST00000534049 ADARB2-AS1A8MUL3 147 aa7.77□□□□□ -1.17
ITGB1-219ENST00000534049 PPP1R15AO75807 674 aaPredicted RBP7.77□□□□□ -1.17
ITGB1-219ENST00000534049 GSK3AP49840 483 aa7.77□□□□□ -1.17
ITGB1-219ENST00000534049 PCBP4P57723 403 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms