RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 NFATC2IPQ8NCF5 419 aa13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 TNIP1Q15025 636 aa13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 PCMTD1Q96MG8 357 aaPredicted RBP13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 EXOC6BQ9Y2D4 811 aa13.29□□□□□ -0.28
AMBRA1-211ENST00000533727 GNPATO15228 680 aa13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 FAM98CQ17RN3 349 aaKnown RBP13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 NOM1Q5C9Z4 860 aaKnown RBP13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 IQCA1Q86XH1 822 aa13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 EHMT1Q9H9B1 1298 aa13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 ARHGAP31Q2M1Z3 1444 aa13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 ATP5J2-PTCD1G3V325 749 aa13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 PIP4K2AP48426 406 aaPredicted RBP13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 HMGB1P09429 215 aaKnown RBP13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 NASPP49321 788 aaPredicted RBP13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 LINS1Q8NG48 757 aa13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 RBM17Q96I25 401 aaKnown RBP13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 RRP9O43818 475 aaKnown RBP13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 NUP133Q8WUM0 1156 aa13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 SBNO2Q9Y2G9 1366 aa13.28□□□□□ -0.28
AMBRA1-211ENST00000533727 F6X3S4 739 aa13.27□□□□□ -0.28
AMBRA1-211ENST00000533727 SEC63Q9UGP8 760 aaKnown RBP13.27□□□□□ -0.28
AMBRA1-211ENST00000533727 CCDC178Q5BJE1 867 aa13.27□□□□□ -0.29
AMBRA1-211ENST00000533727 ZC3H12CQ9C0D7 883 aaKnown RBP13.27□□□□□ -0.29
AMBRA1-211ENST00000533727 CHPF2Q9P2E5 772 aa13.27□□□□□ -0.29
AMBRA1-211ENST00000533727 ZRANB1Q9UGI0 708 aa13.27□□□□□ -0.29
AMBRA1-211ENST00000533727 SLC39A6Q13433 755 aa13.27□□□□□ -0.29
AMBRA1-211ENST00000533727 KRT18P05783 430 aaKnown RBP13.27□□□□□ -0.29
AMBRA1-211ENST00000533727 FAM83GA6ND36 823 aa13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 CALRP27797 417 aaKnown RBP13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 IL15P40933 162 aaPredicted RBP13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 FOXD4L6Q3SYB3 417 aaPredicted RBP13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 SASS6Q6UVJ0 657 aa13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 OLFM4Q6UX06 510 aa13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 FOXD4L3Q6VB84 417 aaPredicted RBP13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 MPHOSPH6Q99547 160 aaKnown RBP13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 ECHDC1Q9NTX5 307 aa13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 CLASP1Q7Z460 1538 aa13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 PARD3Q8TEW0 1356 aa13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 ZFYP08048 801 aaPredicted RBP13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 NAT10Q9H0A0 1025 aaKnown RBP13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 CCDC39Q9UFE4 941 aa13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 ERVV-2B6SEH9 535 aa13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 ARGLU1Q9NWB6 273 aaPredicted RBP13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 GCC2Q8IWJ2 1684 aa13.26□□□□□ -0.29
AMBRA1-211ENST00000533727 LMOD1P29536 600 aaPredicted RBP13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 CCDC87Q9NVE4 849 aa13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 GRM8O00222 908 aa13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 CNBD1Q8NA66 436 aa13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 CTCFLQ8NI51 663 aaPredicted RBP13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 CRNKL1Q9BZJ0 848 aaKnown RBP13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 ZNF76P36508 570 aa13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 NUTM1Q86Y26 1132 aa13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 EVI5LQ96CN4 794 aa13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 MYOM2P54296 1465 aa13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 PLCG2P16885 1265 aa13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 PDE4BQ07343 736 aa13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 A2ML1A8K2U0 1454 aa13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 FAM135BQ49AJ0 1406 aa13.25□□□□□ -0.29
AMBRA1-211ENST00000533727 APBA3O96018 575 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 RXRBP28702 533 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 EPS15P42566 896 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 SUPT20HQ8NEM7 779 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 FEZ1Q99689 392 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 TRAK2O60296 914 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 HMGN5P82970 282 aaKnown RBP13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 STK38Q15208 465 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 CCDC70Q6NSX1 233 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 CWC27Q6UX04 472 aaKnown RBP13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 DDX21Q9NR30 783 aaKnown RBP eCLIP13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 CUL5Q93034 780 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 MINDY4BA8MYZ0 360 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 FOSBP53539 338 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 ATP2B3Q16720 1220 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 HOMER1Q86YM7 354 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 BOLA2Q9H3K6 86 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 BMP2KQ9NSY1 1161 aaPredicted RBP13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 SHROOM2Q13796 1616 aa13.24□□□□□ -0.29
AMBRA1-211ENST00000533727 ERCC6L2Q5T890 1561 aa13.23□□□□□ -0.29
AMBRA1-211ENST00000533727 SDF4Q9BRK5 362 aa13.23□□□□□ -0.29
AMBRA1-211ENST00000533727 PDRG1Q9NUG6 133 aa13.23□□□□□ -0.29
AMBRA1-211ENST00000533727 QTRT2Q9H974 415 aaKnown RBP13.23□□□□□ -0.29
AMBRA1-211ENST00000533727 PDE6BP35913 854 aa13.22□□□□□ -0.29
AMBRA1-211ENST00000533727 FAM196AQ6ZSG2 479 aa13.22□□□□□ -0.29
AMBRA1-211ENST00000533727 ABCC3O15438 1527 aa13.22□□□□□ -0.29
AMBRA1-211ENST00000533727 ZNF213O14771 459 aa13.22□□□□□ -0.29
AMBRA1-211ENST00000533727 MAP4K4O95819 1239 aaPredicted RBP13.22□□□□□ -0.29
AMBRA1-211ENST00000533727 ZNF790Q6PG37 636 aa13.22□□□□□ -0.29
AMBRA1-211ENST00000533727 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
AMBRA1-211ENST00000533727 IRS4O14654 1257 aaPredicted RBP13.22□□□□□ -0.29
AMBRA1-211ENST00000533727 KINO60870 393 aaKnown RBP13.22□□□□□ -0.29
AMBRA1-211ENST00000533727 TRIM27P14373 513 aa13.22□□□□□ -0.29
AMBRA1-211ENST00000533727 FBLN1P23142 703 aa13.22□□□□□ -0.29
AMBRA1-211ENST00000533727 LETM1O95202 739 aaPredicted RBP13.21□□□□□ -0.29
AMBRA1-211ENST00000533727 ATP2B1P20020 1258 aa13.21□□□□□ -0.29
AMBRA1-211ENST00000533727 CCDC184Q52MB2 194 aa13.21□□□□□ -0.29
AMBRA1-211ENST00000533727 CCDC12Q8WUD4 166 aaPredicted RBP13.21□□□□□ -0.29
AMBRA1-211ENST00000533727 JAKMIP1Q96N16 626 aaKnown RBP13.21□□□□□ -0.29
AMBRA1-211ENST00000533727 SLC52A2Q9HAB3 445 aa13.21□□□□□ -0.29
AMBRA1-211ENST00000533727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.297e-7■■□□□ 12.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms