RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 ATP10DQ9P241 1426 aa29.13■■■□□ 2.25
BEST1-207ENST00000533521 TTLL6Q8N841 843 aa29.13■■■□□ 2.25
BEST1-207ENST00000533521 ST5P78524 1137 aa29.12■■■□□ 2.25
BEST1-207ENST00000533521 MAP3K15Q6ZN16 1313 aa29.12■■■□□ 2.25
BEST1-207ENST00000533521 NUP98P52948 1817 aa29.11■■■□□ 2.25
BEST1-207ENST00000533521 CFAP44Q96MT7 982 aa29.11■■■□□ 2.25
BEST1-207ENST00000533521 HOXB7P09629 217 aa29.1■■■□□ 2.25
BEST1-207ENST00000533521 CALD1Q05682 793 aaKnown RBP29.1■■■□□ 2.25
BEST1-207ENST00000533521 TPTE2Q6XPS3 522 aa29.1■■■□□ 2.25
BEST1-207ENST00000533521 NIP7Q9Y221 180 aaKnown RBP eCLIP29.1■■■□□ 2.25
BEST1-207ENST00000533521 KIF6Q6ZMV9 814 aa29.09■■■□□ 2.25
BEST1-207ENST00000533521 LRP10Q7Z4F1 713 aa29.09■■■□□ 2.25
BEST1-207ENST00000533521 NBPF5PQ86XG9 351 aaPredicted RBP29.09■■■□□ 2.25
BEST1-207ENST00000533521 PDIA6Q15084 440 aa29.08■■■□□ 2.25
BEST1-207ENST00000533521 HLFQ16534 295 aa29.08■■■□□ 2.25
BEST1-207ENST00000533521 APAF1O14727 1248 aa29.07■■■□□ 2.24
BEST1-207ENST00000533521 NPHP1O15259 732 aa29.07■■■□□ 2.24
BEST1-207ENST00000533521 SBF1O95248 1867 aa29.06■■■□□ 2.24
BEST1-207ENST00000533521 KLRG2A4D1S0 409 aaPredicted RBP29.06■■■□□ 2.24
BEST1-207ENST00000533521 ANP32CO43423 234 aa29.06■■■□□ 2.24
BEST1-207ENST00000533521 MYL6BP14649 208 aa29.06■■■□□ 2.24
BEST1-207ENST00000533521 STYK1Q6J9G0 422 aa29.06■■■□□ 2.24
BEST1-207ENST00000533521 COL11A2P13942 1736 aaPredicted RBP29.06■■■□□ 2.24
BEST1-207ENST00000533521 IBTKQ9P2D0 1353 aaPredicted RBP29.05■■■□□ 2.24
BEST1-207ENST00000533521 ZNF853P0CG23 659 aa29.05■■■□□ 2.24
BEST1-207ENST00000533521 SRGNP10124 158 aa29.05■■■□□ 2.24
BEST1-207ENST00000533521 NCBP3Q53F19 620 aaKnown RBP29.05■■■□□ 2.24
BEST1-207ENST00000533521 TTLL7Q6ZT98 887 aa29.05■■■□□ 2.24
BEST1-207ENST00000533521 GIGYF2Q6Y7W6 1299 aaKnown RBP29.04■■■□□ 2.24
BEST1-207ENST00000533521 NYXQ9GZU5 481 aa29.04■■■□□ 2.24
BEST1-207ENST00000533521 GPBP1L1Q9HC44 474 aaPredicted RBP29.04■■■□□ 2.24
BEST1-207ENST00000533521 ARFGEF2Q9Y6D5 1785 aa29.03■■■□□ 2.24
BEST1-207ENST00000533521 EIF2S2P20042 333 aaKnown RBP29.03■■■□□ 2.24
BEST1-207ENST00000533521 NGEFQ8N5V2 710 aa29.03■■■□□ 2.24
BEST1-207ENST00000533521 CNKSR1Q969H4 720 aa29.03■■■□□ 2.24
BEST1-207ENST00000533521 IFT57Q9NWB7 429 aa29.03■■■□□ 2.24
BEST1-207ENST00000533521 MASTLQ96GX5 879 aa29.02■■■□□ 2.24
BEST1-207ENST00000533521 DDX21Q9NR30 783 aaKnown RBP eCLIP29.02■■■□□ 2.24
BEST1-207ENST00000533521 C1QTNF8P60827 252 aa29.01■■■□□ 2.23
BEST1-207ENST00000533521 GNAI1P63096 354 aa29.01■■■□□ 2.23
BEST1-207ENST00000533521 CCDC184Q52MB2 194 aa29.01■■■□□ 2.23
BEST1-207ENST00000533521 ZNF622Q969S3 477 aaKnown RBP eCLIP29.01■■■□□ 2.23
BEST1-207ENST00000533521 LAS1LQ9Y4W2 734 aaKnown RBP29.01■■■□□ 2.23
BEST1-207ENST00000533521 RIC1Q4ADV7 1423 aa29.01■■■□□ 2.23
BEST1-207ENST00000533521 ZC3H4Q9UPT8 1303 aaKnown RBP29■■■□□ 2.23
BEST1-207ENST00000533521 CCDC27Q2M243 656 aa29■■■□□ 2.23
BEST1-207ENST00000533521 C9orf131Q5VYM1 1079 aa29■■■□□ 2.23
BEST1-207ENST00000533521 ZNF34Q8IZ26 560 aa29■■■□□ 2.23
BEST1-207ENST00000533521 CCDC24Q8N4L8 307 aa28.99■■■□□ 2.23
BEST1-207ENST00000533521 NPR1P16066 1061 aa28.98■■■□□ 2.23
BEST1-207ENST00000533521 ZBTB3Q9H5J0 574 aa28.98■■■□□ 2.23
BEST1-207ENST00000533521 MBIPQ9NS73 344 aa28.98■■■□□ 2.23
BEST1-207ENST00000533521 PARP10Q53GL7 1025 aa28.97■■■□□ 2.23
BEST1-207ENST00000533521 SOGA3Q5TF21 947 aa28.97■■■□□ 2.23
BEST1-207ENST00000533521 FER1L6Q2WGJ9 1857 aa28.96■■■□□ 2.23
BEST1-207ENST00000533521 KRT24Q2M2I5 525 aa28.96■■■□□ 2.23
BEST1-207ENST00000533521 PROSER3Q2NL68 480 aa28.96■■■□□ 2.23
BEST1-207ENST00000533521 MRS2Q9HD23 443 aa28.96■■■□□ 2.23
BEST1-207ENST00000533521 LTBP3Q9NS15 1303 aa28.95■■■□□ 2.23
BEST1-207ENST00000533521 SLX4Q8IY92 1834 aa28.95■■■□□ 2.23
BEST1-207ENST00000533521 LMNB1P20700 586 aa28.95■■■□□ 2.22
BEST1-207ENST00000533521 GTF2E1P29083 439 aaPredicted RBP28.95■■■□□ 2.22
BEST1-207ENST00000533521 HSP90AB3PQ58FF7 597 aa28.95■■■□□ 2.22
BEST1-207ENST00000533521 HDGFL1Q5TGJ6 251 aa28.95■■■□□ 2.22
BEST1-207ENST00000533521 CHMP4AQ9BY43 222 aa28.95■■■□□ 2.22
BEST1-207ENST00000533521 DBF4Q9UBU7 674 aaPredicted RBP28.95■■■□□ 2.22
BEST1-207ENST00000533521 RNF123Q5XPI4 1314 aa28.94■■■□□ 2.22
BEST1-207ENST00000533521 UBN2Q6ZU65 1347 aa28.94■■■□□ 2.22
BEST1-207ENST00000533521 CRY2Q49AN0 593 aa28.94■■■□□ 2.22
BEST1-207ENST00000533521 COPS6Q7L5N1 327 aa28.94■■■□□ 2.22
BEST1-207ENST00000533521 PPP1R42Q7Z4L9 355 aa28.94■■■□□ 2.22
BEST1-207ENST00000533521 RNF181Q9P0P0 153 aa28.94■■■□□ 2.22
BEST1-207ENST00000533521 ANKRD36CQ5JPF3 1778 aa28.93■■■□□ 2.22
BEST1-207ENST00000533521 DUSP27Q5VZP5 1158 aa28.93■■■□□ 2.22
BEST1-207ENST00000533521 PRPF40BQ6NWY9 871 aaKnown RBP28.93■■■□□ 2.22
BEST1-207ENST00000533521 NFKBIEO00221 500 aa28.92■■■□□ 2.22
BEST1-207ENST00000533521 CCDC88AQ3V6T2 1871 aa28.91■■■□□ 2.22
BEST1-207ENST00000533521 C21orf2O43822 256 aa28.91■■■□□ 2.22
BEST1-207ENST00000533521 ANXA1P04083 346 aa28.91■■■□□ 2.22
BEST1-207ENST00000533521 ALDH1B1P30837 517 aa28.91■■■□□ 2.22
BEST1-207ENST00000533521 SUSD4Q5VX71 490 aa28.91■■■□□ 2.22
BEST1-207ENST00000533521 XAGE3Q8WTP9 111 aa28.91■■■□□ 2.22
BEST1-207ENST00000533521 C7orf43Q8WVR3 580 aa28.91■■■□□ 2.22
BEST1-207ENST00000533521 HYPKQ9NX55 129 aa28.91■■■□□ 2.22
BEST1-207ENST00000533521 CHPF2Q9P2E5 772 aa28.91■■■□□ 2.22
BEST1-207ENST00000533521 CACNA1SQ13698 1873 aa28.91■■■□□ 2.22
BEST1-207ENST00000533521 NTSR2O95665 410 aa28.9■■■□□ 2.22
BEST1-207ENST00000533521 GPTP24298 496 aa28.9■■■□□ 2.22
BEST1-207ENST00000533521 ZNF526Q8TF50 670 aaPredicted RBP28.9■■■□□ 2.22
BEST1-207ENST00000533521 DICER1Q9UPY3 1922 aaKnown RBP28.9■■■□□ 2.22
BEST1-207ENST00000533521 FAM177BA6PVY3 158 aa28.89■■■□□ 2.22
BEST1-207ENST00000533521 RASSF7Q02833 373 aa28.89■■■□□ 2.22
BEST1-207ENST00000533521 NECTIN2Q92692 538 aa28.89■■■□□ 2.22
BEST1-207ENST00000533521 IL16Q14005 1332 aa28.89■■■□□ 2.21
BEST1-207ENST00000533521 ABCC12Q96J65 1359 aa28.88■■■□□ 2.21
BEST1-207ENST00000533521 KIF3CO14782 793 aa28.88■■■□□ 2.21
BEST1-207ENST00000533521 HOXA10P31260 410 aaPredicted RBP28.88■■■□□ 2.21
BEST1-207ENST00000533521 TCIRG1Q13488 830 aa28.88■■■□□ 2.21
BEST1-207ENST00000533521 ERFEQ4G0M1 354 aa28.88■■■□□ 2.21
BEST1-207ENST00000533521 SLC10A5Q5PT55 438 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms