RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ERVV-1B6SEH8 477 aa15.47■□□□□ 0.07
SSBP3-214ENST00000533209 POLRMTO00411 1230 aaKnown RBP15.47■□□□□ 0.07
SSBP3-214ENST00000533209 RGL2O15211 777 aa15.47■□□□□ 0.07
SSBP3-214ENST00000533209 VAMP4O75379 141 aa15.47■□□□□ 0.07
SSBP3-214ENST00000533209 HLFQ16534 295 aa15.47■□□□□ 0.07
SSBP3-214ENST00000533209 CCDC30Q5VVM6 783 aa15.47■□□□□ 0.07
SSBP3-214ENST00000533209 CLEC4GQ6UXB4 293 aa15.47■□□□□ 0.07
SSBP3-214ENST00000533209 COPS6Q7L5N1 327 aa15.47■□□□□ 0.07
SSBP3-214ENST00000533209 XAGE3Q8WTP9 111 aa15.47■□□□□ 0.07
SSBP3-214ENST00000533209 AIMP1Q12904 312 aaKnown RBP15.46■□□□□ 0.07
SSBP3-214ENST00000533209 KIF6Q6ZMV9 814 aa15.46■□□□□ 0.07
SSBP3-214ENST00000533209 BICDL1Q6ZP65 573 aa15.46■□□□□ 0.07
SSBP3-214ENST00000533209 TRMT2AQ8IZ69 625 aaKnown RBP15.46■□□□□ 0.07
SSBP3-214ENST00000533209 CHMP4AQ9BY43 222 aa15.46■□□□□ 0.07
SSBP3-214ENST00000533209 HYPKQ9NX55 129 aa15.46■□□□□ 0.07
SSBP3-214ENST00000533209 PARP3Q9Y6F1 533 aa15.46■□□□□ 0.07
SSBP3-214ENST00000533209 BCORQ6W2J9 1755 aa15.45■□□□□ 0.06
SSBP3-214ENST00000533209 SYT17Q9BSW7 474 aa15.45■□□□□ 0.06
SSBP3-214ENST00000533209 ZBTB3Q9H5J0 574 aa15.45■□□□□ 0.06
SSBP3-214ENST00000533209 ZNF652Q9Y2D9 606 aa15.45■□□□□ 0.06
SSBP3-214ENST00000533209 TCERG1O14776 1098 aaKnown RBP15.44■□□□□ 0.06
SSBP3-214ENST00000533209 KLHL34Q8N239 644 aa15.44■□□□□ 0.06
SSBP3-214ENST00000533209 PHAXQ9H814 394 aaKnown RBP15.44■□□□□ 0.06
SSBP3-214ENST00000533209 SERPINB2P05120 415 aa15.43■□□□□ 0.06
SSBP3-214ENST00000533209 GIGYF2Q6Y7W6 1299 aaKnown RBP15.43■□□□□ 0.06
SSBP3-214ENST00000533209 CD2APQ9Y5K6 639 aa15.43■□□□□ 0.06
SSBP3-214ENST00000533209 C10orf71Q711Q0 1435 aa15.43■□□□□ 0.06
SSBP3-214ENST00000533209 CARMIL3Q8ND23 1372 aa15.42■□□□□ 0.06
SSBP3-214ENST00000533209 NLGN2Q8NFZ4 835 aa15.42■□□□□ 0.06
SSBP3-214ENST00000533209 SETDB2Q96T68 719 aa15.42■□□□□ 0.06
SSBP3-214ENST00000533209 STK31Q9BXU1 1019 aa15.42■□□□□ 0.06
SSBP3-214ENST00000533209 ATP10DQ9P241 1426 aa15.42■□□□□ 0.06
SSBP3-214ENST00000533209 ANKRD13DQ6ZTN6 518 aa15.41■□□□□ 0.06
SSBP3-214ENST00000533209 PLBD2Q8NHP8 589 aa15.41■□□□□ 0.06
SSBP3-214ENST00000533209 NIP7Q9Y221 180 aaKnown RBP eCLIP15.41■□□□□ 0.06
SSBP3-214ENST00000533209 ZBED9Q6R2W3 1325 aa15.41■□□□□ 0.06
SSBP3-214ENST00000533209 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
SSBP3-214ENST00000533209 G2E3Q7L622 706 aa15.4■□□□□ 0.06
SSBP3-214ENST00000533209 ZNF34Q8IZ26 560 aa15.4■□□□□ 0.06
SSBP3-214ENST00000533209 GPTP24298 496 aa15.39■□□□□ 0.05
SSBP3-214ENST00000533209 TCIRG1Q13488 830 aa15.39■□□□□ 0.05
SSBP3-214ENST00000533209 PRR5LQ6MZQ0 368 aa15.39■□□□□ 0.05
SSBP3-214ENST00000533209 NRXN2Q9P2S2 1712 aa15.39■□□□□ 0.05
SSBP3-214ENST00000533209 UBN2Q6ZU65 1347 aa15.39■□□□□ 0.05
SSBP3-214ENST00000533209 NBPF5PQ86XG9 351 aaPredicted RBP15.38■□□□□ 0.05
SSBP3-214ENST00000533209 FAM177BA6PVY3 158 aa15.37■□□□□ 0.05
SSBP3-214ENST00000533209 FLIIQ13045 1269 aa15.37■□□□□ 0.05
SSBP3-214ENST00000533209 HSP90AB3PQ58FF7 597 aa15.37■□□□□ 0.05
SSBP3-214ENST00000533209 RIC3Q7Z5B4 369 aa15.37■□□□□ 0.05
SSBP3-214ENST00000533209 CCDC24Q8N4L8 307 aa15.37■□□□□ 0.05
SSBP3-214ENST00000533209 CNBD1Q8NA66 436 aa15.37■□□□□ 0.05
SSBP3-214ENST00000533209 NUP98P52948 1817 aa15.37■□□□□ 0.05
SSBP3-214ENST00000533209 PXDNLA1KZ92 1463 aa15.37■□□□□ 0.05
SSBP3-214ENST00000533209 AFDNP55196 1824 aaKnown RBP15.36■□□□□ 0.05
SSBP3-214ENST00000533209 DDX58O95786 925 aaKnown RBP15.36■□□□□ 0.05
SSBP3-214ENST00000533209 CT47B1P0C2W7 299 aaPredicted RBP15.36■□□□□ 0.05
SSBP3-214ENST00000533209 TGFB2P61812 414 aa15.36■□□□□ 0.05
SSBP3-214ENST00000533209 PARP10Q53GL7 1025 aa15.36■□□□□ 0.05
SSBP3-214ENST00000533209 SUSD4Q5VX71 490 aa15.36■□□□□ 0.05
SSBP3-214ENST00000533209 KIF13BQ9NQT8 1826 aa15.36■□□□□ 0.05
SSBP3-214ENST00000533209 ADCY9O60503 1353 aa15.36■□□□□ 0.05
SSBP3-214ENST00000533209 PI4KAP2A4QPH2 592 aa15.35■□□□□ 0.05
SSBP3-214ENST00000533209 NTSR2O95665 410 aa15.35■□□□□ 0.05
SSBP3-214ENST00000533209 DPEP1P16444 411 aa15.35■□□□□ 0.05
SSBP3-214ENST00000533209 KSR2Q6VAB6 950 aa15.35■□□□□ 0.05
SSBP3-214ENST00000533209 TPTE2Q6XPS3 522 aa15.35■□□□□ 0.05
SSBP3-214ENST00000533209 NLRP10Q86W26 655 aa15.35■□□□□ 0.05
SSBP3-214ENST00000533209 PI4KAP1Q8N8J0 262 aa15.35■□□□□ 0.05
SSBP3-214ENST00000533209 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
SSBP3-214ENST00000533209 ISCA1Q9BUE6 129 aa15.35■□□□□ 0.05
SSBP3-214ENST00000533209 MAP3K2Q9Y2U5 619 aa15.35■□□□□ 0.05
SSBP3-214ENST00000533209 IBTKQ9P2D0 1353 aaPredicted RBP15.35■□□□□ 0.05
SSBP3-214ENST00000533209 A0A0G2JLW4 131 aa15.34■□□□□ 0.05
SSBP3-214ENST00000533209 ATP5J2-PTCD1G3V325 749 aa15.34■□□□□ 0.05
SSBP3-214ENST00000533209 NPHP1O15259 732 aa15.34■□□□□ 0.05
SSBP3-214ENST00000533209 KCNA3P22001 575 aa15.34■□□□□ 0.05
SSBP3-214ENST00000533209 ST5P78524 1137 aa15.34■□□□□ 0.05
SSBP3-214ENST00000533209 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
SSBP3-214ENST00000533209 SSH1Q8WYL5 1049 aa15.34■□□□□ 0.05
SSBP3-214ENST00000533209 METTL22Q9BUU2 404 aaPredicted RBP15.34■□□□□ 0.05
SSBP3-214ENST00000533209 BRIP1Q9BX63 1249 aa15.34■□□□□ 0.05
SSBP3-214ENST00000533209 NYXQ9GZU5 481 aa15.34■□□□□ 0.05
SSBP3-214ENST00000533209 KIAA1551Q9HCM1 1747 aa15.34■□□□□ 0.05
SSBP3-214ENST00000533209 CHRNA5P30532 468 aa15.33■□□□□ 0.04
SSBP3-214ENST00000533209 TRIM28Q13263 835 aaKnown RBP15.33■□□□□ 0.04
SSBP3-214ENST00000533209 FKBP5Q13451 457 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-214ENST00000533209 ALDH1L2Q3SY69 923 aa15.33■□□□□ 0.04
SSBP3-214ENST00000533209 PPP1R42Q7Z4L9 355 aa15.33■□□□□ 0.04
SSBP3-214ENST00000533209 NUTM1Q86Y26 1132 aa15.33■□□□□ 0.04
SSBP3-214ENST00000533209 MYD88Q99836 296 aa15.33■□□□□ 0.04
SSBP3-214ENST00000533209 ERFEQ4G0M1 354 aa15.32■□□□□ 0.04
SSBP3-214ENST00000533209 UTP14AQ9BVJ6 771 aaKnown RBP15.32■□□□□ 0.04
SSBP3-214ENST00000533209 ABCC12Q96J65 1359 aa15.32■□□□□ 0.04
SSBP3-214ENST00000533209 ARFGEF2Q9Y6D5 1785 aa15.31■□□□□ 0.04
SSBP3-214ENST00000533209 KLRG2A4D1S0 409 aaPredicted RBP15.31■□□□□ 0.04
SSBP3-214ENST00000533209 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
SSBP3-214ENST00000533209 PDE6BP35913 854 aa15.31■□□□□ 0.04
SSBP3-214ENST00000533209 BCL2L13Q9BXK5 485 aa15.31■□□□□ 0.04
SSBP3-214ENST00000533209 IGKV5-2P06315 115 aa15.3■□□□□ 0.04
SSBP3-214ENST00000533209 RARSP54136 660 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms