RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 CARMIL3Q8ND23 1372 aa20.27■□□□□ 0.84
DEPDC7-204ENST00000532078 BICDL1Q6ZP65 573 aa20.27■□□□□ 0.84
DEPDC7-204ENST00000532078 TOMM70O94826 608 aa20.26■□□□□ 0.83
DEPDC7-204ENST00000532078 NMRK2Q9NPI5 230 aa20.26■□□□□ 0.83
DEPDC7-204ENST00000532078 SBF1O95248 1867 aa20.26■□□□□ 0.83
DEPDC7-204ENST00000532078 BCORQ6W2J9 1755 aa20.26■□□□□ 0.83
DEPDC7-204ENST00000532078 H0YIN7 160 aa20.25■□□□□ 0.83
DEPDC7-204ENST00000532078 TBC1D9BQ66K14 1250 aa20.25■□□□□ 0.83
DEPDC7-204ENST00000532078 C2CD5Q86YS7 1000 aa20.25■□□□□ 0.83
DEPDC7-204ENST00000532078 TTLL6Q8N841 843 aa20.25■□□□□ 0.83
DEPDC7-204ENST00000532078 TBC1D2BQ9UPU7 963 aa20.25■□□□□ 0.83
DEPDC7-204ENST00000532078 KDM2BQ8NHM5 1336 aa20.25■□□□□ 0.83
DEPDC7-204ENST00000532078 TNRC6CQ9HCJ0 1690 aaKnown RBP20.24■□□□□ 0.83
DEPDC7-204ENST00000532078 KCNQ3O43525 872 aa20.24■□□□□ 0.83
DEPDC7-204ENST00000532078 A1BGP04217 495 aa20.24■□□□□ 0.83
DEPDC7-204ENST00000532078 ANKRD31Q8N7Z5 1873 aa20.24■□□□□ 0.83
DEPDC7-204ENST00000532078 EVX2Q03828 476 aa20.23■□□□□ 0.83
DEPDC7-204ENST00000532078 MCM10Q7L590 875 aa20.23■□□□□ 0.83
DEPDC7-204ENST00000532078 PDZRN3Q9UPQ7 1066 aa20.23■□□□□ 0.83
DEPDC7-204ENST00000532078 ZC3H4Q9UPT8 1303 aaKnown RBP20.23■□□□□ 0.83
DEPDC7-204ENST00000532078 HTATSF1O43719 755 aaKnown RBP20.22■□□□□ 0.83
DEPDC7-204ENST00000532078 RASSF7Q02833 373 aa20.22■□□□□ 0.83
DEPDC7-204ENST00000532078 C16orf71Q8IYS4 520 aaPredicted RBP20.22■□□□□ 0.83
DEPDC7-204ENST00000532078 COL11A2P13942 1736 aaPredicted RBP20.22■□□□□ 0.83
DEPDC7-204ENST00000532078 CAMTA2O94983 1202 aa20.21■□□□□ 0.83
DEPDC7-204ENST00000532078 SNRPA1P09661 255 aaKnown RBP20.21■□□□□ 0.83
DEPDC7-204ENST00000532078 PDE6BP35913 854 aa20.21■□□□□ 0.83
DEPDC7-204ENST00000532078 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
DEPDC7-204ENST00000532078 BRIP1Q9BX63 1249 aa20.21■□□□□ 0.83
DEPDC7-204ENST00000532078 NEFMP07197 916 aa20.2■□□□□ 0.82
DEPDC7-204ENST00000532078 LMNB1P20700 586 aa20.2■□□□□ 0.82
DEPDC7-204ENST00000532078 APLP1P51693 650 aa20.2■□□□□ 0.82
DEPDC7-204ENST00000532078 PRR5LQ6MZQ0 368 aa20.2■□□□□ 0.82
DEPDC7-204ENST00000532078 CNBD1Q8NA66 436 aa20.2■□□□□ 0.82
DEPDC7-204ENST00000532078 RBM46Q8TBY0 533 aaKnown RBP20.2■□□□□ 0.82
DEPDC7-204ENST00000532078 SETDB2Q96T68 719 aa20.2■□□□□ 0.82
DEPDC7-204ENST00000532078 TIAM2Q8IVF5 1701 aa20.19■□□□□ 0.82
DEPDC7-204ENST00000532078 NPHP1O15259 732 aa20.19■□□□□ 0.82
DEPDC7-204ENST00000532078 USP16Q9Y5T5 823 aa20.19■□□□□ 0.82
DEPDC7-204ENST00000532078 LAMB4A4D0S4 1761 aa20.18■□□□□ 0.82
DEPDC7-204ENST00000532078 DCTN1Q14203 1278 aa20.18■□□□□ 0.82
DEPDC7-204ENST00000532078 IFNLR1Q8IU57 520 aaPredicted RBP20.18■□□□□ 0.82
DEPDC7-204ENST00000532078 PRAMEF22A3QJZ6 481 aa20.17■□□□□ 0.82
DEPDC7-204ENST00000532078 ST5P78524 1137 aa20.17■□□□□ 0.82
DEPDC7-204ENST00000532078 ZNF622Q969S3 477 aaKnown RBP eCLIP20.17■□□□□ 0.82
DEPDC7-204ENST00000532078 ZNF652Q9Y2D9 606 aa20.17■□□□□ 0.82
DEPDC7-204ENST00000532078 PIP4K2AP48426 406 aaPredicted RBP20.16■□□□□ 0.82
DEPDC7-204ENST00000532078 TAF7Q15545 349 aaPredicted RBP20.16■□□□□ 0.82
DEPDC7-204ENST00000532078 CLEC4GQ6UXB4 293 aa20.16■□□□□ 0.82
DEPDC7-204ENST00000532078 SP7Q8TDD2 431 aaPredicted RBP20.16■□□□□ 0.82
DEPDC7-204ENST00000532078 DLG5Q8TDM6 1919 aa20.15■□□□□ 0.82
DEPDC7-204ENST00000532078 NFKBIEO00221 500 aa20.15■□□□□ 0.82
DEPDC7-204ENST00000532078 CCDC24Q8N4L8 307 aa20.15■□□□□ 0.82
DEPDC7-204ENST00000532078 KDM3BQ7LBC6 1761 aa20.14■□□□□ 0.81
DEPDC7-204ENST00000532078 ARFGEF2Q9Y6D5 1785 aa20.14■□□□□ 0.81
DEPDC7-204ENST00000532078 WDR90Q96KV7 1748 aa20.14■□□□□ 0.81
DEPDC7-204ENST00000532078 RGL2O15211 777 aa20.14■□□□□ 0.81
DEPDC7-204ENST00000532078 FSTL1Q12841 308 aa20.14■□□□□ 0.81
DEPDC7-204ENST00000532078 RRAGCQ9HB90 399 aa20.14■□□□□ 0.81
DEPDC7-204ENST00000532078 CCDC88AQ3V6T2 1871 aa20.13■□□□□ 0.81
DEPDC7-204ENST00000532078 PRELPP51888 382 aa20.13■□□□□ 0.81
DEPDC7-204ENST00000532078 NBPF5PQ86XG9 351 aaPredicted RBP20.13■□□□□ 0.81
DEPDC7-204ENST00000532078 PNISRQ8TF01 805 aaKnown RBP20.13■□□□□ 0.81
DEPDC7-204ENST00000532078 FER1L6Q2WGJ9 1857 aa20.13■□□□□ 0.81
DEPDC7-204ENST00000532078 C21orf2O43822 256 aa20.12■□□□□ 0.81
DEPDC7-204ENST00000532078 STYK1Q6J9G0 422 aa20.12■□□□□ 0.81
DEPDC7-204ENST00000532078 CNKSR1Q969H4 720 aa20.12■□□□□ 0.81
DEPDC7-204ENST00000532078 CACNA1SQ13698 1873 aa20.11■□□□□ 0.81
DEPDC7-204ENST00000532078 GLTPD2A6NH11 291 aa20.11■□□□□ 0.81
DEPDC7-204ENST00000532078 NBPF26B4DH59 902 aa20.11■□□□□ 0.81
DEPDC7-204ENST00000532078 SRGNP10124 158 aa20.11■□□□□ 0.81
DEPDC7-204ENST00000532078 NUBP1P53384 320 aa20.11■□□□□ 0.81
DEPDC7-204ENST00000532078 NBPF10Q6P3W6 841 aaKnown RBP20.11■□□□□ 0.81
DEPDC7-204ENST00000532078 NBPF15Q8N660 670 aa20.11■□□□□ 0.81
DEPDC7-204ENST00000532078 PNNQ9H307 717 aaKnown RBP20.11■□□□□ 0.81
DEPDC7-204ENST00000532078 LTBP3Q9NS15 1303 aa20.1■□□□□ 0.81
DEPDC7-204ENST00000532078 MAPK8IP3Q9UPT6 1336 aa20.1■□□□□ 0.81
DEPDC7-204ENST00000532078 NFE2L2Q16236 605 aa20.1■□□□□ 0.81
DEPDC7-204ENST00000532078 SOGA3Q5TF21 947 aa20.1■□□□□ 0.81
DEPDC7-204ENST00000532078 PRPF40BQ6NWY9 871 aaKnown RBP20.1■□□□□ 0.81
DEPDC7-204ENST00000532078 MASTLQ96GX5 879 aa20.1■□□□□ 0.81
DEPDC7-204ENST00000532078 PLEKHF1Q96S99 279 aa20.1■□□□□ 0.81
DEPDC7-204ENST00000532078 MIS18AQ9NYP9 233 aa20.1■□□□□ 0.81
DEPDC7-204ENST00000532078 DICER1Q9UPY3 1922 aaKnown RBP20.1■□□□□ 0.81
DEPDC7-204ENST00000532078 SLX4Q8IY92 1834 aa20.09■□□□□ 0.81
DEPDC7-204ENST00000532078 RASEFQ8IZ41 740 aa20.09■□□□□ 0.81
DEPDC7-204ENST00000532078 SMC1BQ8NDV3 1235 aa20.09■□□□□ 0.81
DEPDC7-204ENST00000532078 NIP7Q9Y221 180 aaKnown RBP eCLIP20.09■□□□□ 0.81
DEPDC7-204ENST00000532078 VEGFAP15692 232 aaPredicted RBP20.08■□□□□ 0.81
DEPDC7-204ENST00000532078 TSPYL2Q9H2G4 693 aaPredicted RBP20.08■□□□□ 0.81
DEPDC7-204ENST00000532078 TAOK3Q9H2K8 898 aa20.08■□□□□ 0.81
DEPDC7-204ENST00000532078 TPTE2Q6XPS3 522 aa20.07■□□□□ 0.8
DEPDC7-204ENST00000532078 NPR1P16066 1061 aa20.06■□□□□ 0.8
DEPDC7-204ENST00000532078 ERFEQ4G0M1 354 aa20.06■□□□□ 0.8
DEPDC7-204ENST00000532078 DPY19L2Q6NUT2 758 aa20.06■□□□□ 0.8
DEPDC7-204ENST00000532078 DNAJC5GQ8N7S2 189 aa20.06■□□□□ 0.8
DEPDC7-204ENST00000532078 KLRG2A4D1S0 409 aaPredicted RBP20.04■□□□□ 0.8
DEPDC7-204ENST00000532078 EIF4A1P60842 406 aaKnown RBP20.04■□□□□ 0.8
DEPDC7-204ENST00000532078 RALBP1Q15311 655 aa20.04■□□□□ 0.8
DEPDC7-204ENST00000532078 SPOCK2Q92563 424 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms