RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 PPP1R42Q7Z4L9 355 aa13.58□□□□□ -0.24
SRPRA-205ENST00000531104 KAZALD1Q96I82 304 aa13.58□□□□□ -0.24
SRPRA-205ENST00000531104 NGLY1Q96IV0 654 aa13.58□□□□□ -0.24
SRPRA-205ENST00000531104 C8orf37Q96NL8 207 aa13.58□□□□□ -0.24
SRPRA-205ENST00000531104 SLC4A9Q96Q91 983 aa13.58□□□□□ -0.24
SRPRA-205ENST00000531104 HSPA1LP34931 641 aa13.57□□□□□ -0.24
SRPRA-205ENST00000531104 NEXNQ0ZGT2 675 aa13.57□□□□□ -0.24
SRPRA-205ENST00000531104 DNAJC10Q8IXB1 793 aa13.57□□□□□ -0.24
SRPRA-205ENST00000531104 MYD88Q99836 296 aa13.57□□□□□ -0.24
SRPRA-205ENST00000531104 C9orf78Q9NZ63 289 aaPredicted RBP13.57□□□□□ -0.24
SRPRA-205ENST00000531104 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
SRPRA-205ENST00000531104 SALL3Q9BXA9 1300 aa13.57□□□□□ -0.24
SRPRA-205ENST00000531104 RREB1Q92766 1687 aa13.56□□□□□ -0.24
SRPRA-205ENST00000531104 RAB11FIP3O75154 756 aa13.56□□□□□ -0.24
SRPRA-205ENST00000531104 CYP19A1P11511 503 aaPredicted RBP13.56□□□□□ -0.24
SRPRA-205ENST00000531104 TTLL7Q6ZT98 887 aa13.56□□□□□ -0.24
SRPRA-205ENST00000531104 SUCLG2Q96I99 432 aa13.56□□□□□ -0.24
SRPRA-205ENST00000531104 OSBPL3Q9H4L5 887 aa13.56□□□□□ -0.24
SRPRA-205ENST00000531104 ZNF831Q5JPB2 1677 aa13.56□□□□□ -0.24
SRPRA-205ENST00000531104 AFDNP55196 1824 aaKnown RBP13.55□□□□□ -0.24
SRPRA-205ENST00000531104 SMARCA5O60264 1052 aaPredicted RBP13.55□□□□□ -0.24
SRPRA-205ENST00000531104 SEC24BO95487 1268 aa13.55□□□□□ -0.24
SRPRA-205ENST00000531104 STARD3NLO95772 234 aa13.55□□□□□ -0.24
SRPRA-205ENST00000531104 CASP7P55210 303 aa13.55□□□□□ -0.24
SRPRA-205ENST00000531104 C16orf71Q8IYS4 520 aaPredicted RBP13.55□□□□□ -0.24
SRPRA-205ENST00000531104 EXOC6BQ9Y2D4 811 aa13.55□□□□□ -0.24
SRPRA-205ENST00000531104 CCDC9Q9Y3X0 531 aaKnown RBP13.55□□□□□ -0.24
SRPRA-205ENST00000531104 SRGAP3O43295 1099 aa13.54□□□□□ -0.24
SRPRA-205ENST00000531104 ANP32AP39687 249 aaKnown RBP13.54□□□□□ -0.24
SRPRA-205ENST00000531104 FAM98CQ17RN3 349 aaKnown RBP13.54□□□□□ -0.24
SRPRA-205ENST00000531104 LRRCC1Q9C099 1032 aa13.54□□□□□ -0.24
SRPRA-205ENST00000531104 USP21Q9UK80 565 aa13.54□□□□□ -0.24
SRPRA-205ENST00000531104 ATRNO75882 1429 aa13.54□□□□□ -0.24
SRPRA-205ENST00000531104 H7C1W4 665 aa13.53□□□□□ -0.24
SRPRA-205ENST00000531104 GSPT1P15170 499 aaKnown RBP13.53□□□□□ -0.24
SRPRA-205ENST00000531104 TTC22Q5TAA0 569 aa13.53□□□□□ -0.24
SRPRA-205ENST00000531104 OTUD7AQ8TE49 926 aaPredicted RBP13.53□□□□□ -0.24
SRPRA-205ENST00000531104 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
SRPRA-205ENST00000531104 ISCA1Q9BUE6 129 aa13.53□□□□□ -0.24
SRPRA-205ENST00000531104 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
SRPRA-205ENST00000531104 ONECUT3O60422 494 aaPredicted RBP13.52□□□□□ -0.25
SRPRA-205ENST00000531104 TRIM28Q13263 835 aaKnown RBP13.52□□□□□ -0.25
SRPRA-205ENST00000531104 RABL6Q3YEC7 729 aaPredicted RBP13.52□□□□□ -0.25
SRPRA-205ENST00000531104 HSP90AB4PQ58FF6 505 aa13.52□□□□□ -0.25
SRPRA-205ENST00000531104 IPO9Q96P70 1041 aaKnown RBP13.52□□□□□ -0.25
SRPRA-205ENST00000531104 BICC1Q9H694 974 aaKnown RBP13.52□□□□□ -0.25
SRPRA-205ENST00000531104 STAP2Q9UGK3 403 aa13.52□□□□□ -0.25
SRPRA-205ENST00000531104 TUBGCP6Q96RT7 1819 aa13.52□□□□□ -0.25
SRPRA-205ENST00000531104 AOX1Q06278 1338 aa13.51□□□□□ -0.25
SRPRA-205ENST00000531104 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
SRPRA-205ENST00000531104 PDE1AP54750 535 aa13.51□□□□□ -0.25
SRPRA-205ENST00000531104 EPHA10Q5JZY3 1008 aa13.51□□□□□ -0.25
SRPRA-205ENST00000531104 CCDC191Q8NCU4 936 aa13.51□□□□□ -0.25
SRPRA-205ENST00000531104 ATP5J2-PTCD1G3V325 749 aa13.5□□□□□ -0.25
SRPRA-205ENST00000531104 TCIRG1Q13488 830 aa13.5□□□□□ -0.25
SRPRA-205ENST00000531104 RHPN1Q8TCX5 695 aa13.5□□□□□ -0.25
SRPRA-205ENST00000531104 SMARCC1Q92922 1105 aaPredicted RBP13.5□□□□□ -0.25
SRPRA-205ENST00000531104 SYTL4Q96C24 671 aaPredicted RBP13.5□□□□□ -0.25
SRPRA-205ENST00000531104 KIF1BPQ96EK5 621 aa13.5□□□□□ -0.25
SRPRA-205ENST00000531104 ACSBG1Q96GR2 724 aa13.5□□□□□ -0.25
SRPRA-205ENST00000531104 AFF2P51816 1311 aa13.49□□□□□ -0.25
SRPRA-205ENST00000531104 MAP3K15Q6ZN16 1313 aa13.49□□□□□ -0.25
SRPRA-205ENST00000531104 USP42Q9H9J4 1324 aaKnown RBP13.49□□□□□ -0.25
SRPRA-205ENST00000531104 A0A087WZG4 1122 aa13.49□□□□□ -0.25
SRPRA-205ENST00000531104 APBB1O00213 710 aa13.49□□□□□ -0.25
SRPRA-205ENST00000531104 IL6STP40189 918 aaPredicted RBP13.49□□□□□ -0.25
SRPRA-205ENST00000531104 RFX5P48382 616 aaPredicted RBP13.49□□□□□ -0.25
SRPRA-205ENST00000531104 INTS5Q6P9B9 1019 aaKnown RBP13.49□□□□□ -0.25
SRPRA-205ENST00000531104 GJD4Q96KN9 370 aaPredicted RBP13.49□□□□□ -0.25
SRPRA-205ENST00000531104 ZBTB3Q9H5J0 574 aa13.49□□□□□ -0.25
SRPRA-205ENST00000531104 CWC25Q9NXE8 425 aaPredicted RBP13.49□□□□□ -0.25
SRPRA-205ENST00000531104 COL5A3P25940 1745 aaPredicted RBP13.49□□□□□ -0.25
SRPRA-205ENST00000531104 NHSQ6T4R5 1651 aa13.49□□□□□ -0.25
SRPRA-205ENST00000531104 PALLDQ8WX93 1383 aa13.48□□□□□ -0.25
SRPRA-205ENST00000531104 LOC102724428A0A0B4J2F2 783 aa13.48□□□□□ -0.25
SRPRA-205ENST00000531104 ERVV-1B6SEH8 477 aa13.48□□□□□ -0.25
SRPRA-205ENST00000531104 SIK1P57059 783 aa13.48□□□□□ -0.25
SRPRA-205ENST00000531104 FOXO4P98177 505 aa13.48□□□□□ -0.25
SRPRA-205ENST00000531104 GIGYF2Q6Y7W6 1299 aaKnown RBP13.48□□□□□ -0.25
SRPRA-205ENST00000531104 NPM2Q86SE8 214 aaKnown RBP13.48□□□□□ -0.25
SRPRA-205ENST00000531104 TBC1D32Q96NH3 1257 aa13.48□□□□□ -0.25
SRPRA-205ENST00000531104 ZBTB1Q9Y2K1 713 aa13.48□□□□□ -0.25
SRPRA-205ENST00000531104 ANKRD36CQ5JPF3 1778 aa13.48□□□□□ -0.25
SRPRA-205ENST00000531104 KCNQ2O43526 872 aa13.47□□□□□ -0.25
SRPRA-205ENST00000531104 CDC45O75419 566 aa13.47□□□□□ -0.25
SRPRA-205ENST00000531104 MX1P20591 662 aa13.47□□□□□ -0.25
SRPRA-205ENST00000531104 EIF5P55010 431 aaKnown RBP13.47□□□□□ -0.25
SRPRA-205ENST00000531104 ITPK1Q13572 414 aa13.47□□□□□ -0.25
SRPRA-205ENST00000531104 MEX3CQ5U5Q3 659 aaKnown RBP13.47□□□□□ -0.25
SRPRA-205ENST00000531104 KIF6Q6ZMV9 814 aa13.47□□□□□ -0.25
SRPRA-205ENST00000531104 TBC1D9Q6ZT07 1266 aa13.47□□□□□ -0.25
SRPRA-205ENST00000531104 UBE3BQ7Z3V4 1068 aa13.47□□□□□ -0.25
SRPRA-205ENST00000531104 ERC1Q8IUD2 1116 aa13.47□□□□□ -0.25
SRPRA-205ENST00000531104 COPRSQ9NQ92 184 aa13.47□□□□□ -0.25
SRPRA-205ENST00000531104 SDSP20132 328 aa13.46□□□□□ -0.25
SRPRA-205ENST00000531104 DDRGK1Q96HY6 314 aa13.46□□□□□ -0.25
SRPRA-205ENST00000531104 CCDC87Q9NVE4 849 aa13.46□□□□□ -0.25
SRPRA-205ENST00000531104 TRPC5Q9UL62 973 aaPredicted RBP13.46□□□□□ -0.25
SRPRA-205ENST00000531104 PA2G4Q9UQ80 394 aaKnown RBP13.46□□□□□ -0.25
SRPRA-205ENST00000531104 SASH1O94885 1247 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms