RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 ARHGEF1Q92888 912 aaKnown RBP19■□□□□ 0.63
SRPRA-204ENST00000530680 CEP350Q5VT06 3117 aa19■□□□□ 0.63
SRPRA-204ENST00000530680 VAMP4O75379 141 aa18.99■□□□□ 0.63
SRPRA-204ENST00000530680 EIF5P55010 431 aaKnown RBP18.99■□□□□ 0.63
SRPRA-204ENST00000530680 AIMP1Q12904 312 aaKnown RBP18.99■□□□□ 0.63
SRPRA-204ENST00000530680 TRMT2AQ8IZ69 625 aaKnown RBP18.99■□□□□ 0.63
SRPRA-204ENST00000530680 ZNF652Q9Y2D9 606 aa18.99■□□□□ 0.63
SRPRA-204ENST00000530680 YBX3P16989 372 aaKnown RBP eCLIP18.98■□□□□ 0.63
SRPRA-204ENST00000530680 PROSER3Q2NL68 480 aa18.98■□□□□ 0.63
SRPRA-204ENST00000530680 AMIGO3Q86WK7 504 aa18.98■□□□□ 0.63
SRPRA-204ENST00000530680 ZNF428Q96B54 188 aa18.98■□□□□ 0.63
SRPRA-204ENST00000530680 TBC1D2BQ9UPU7 963 aa18.98■□□□□ 0.63
SRPRA-204ENST00000530680 USP42Q9H9J4 1324 aaKnown RBP18.98■□□□□ 0.63
SRPRA-204ENST00000530680 NARFQ9UHQ1 456 aa18.97■□□□□ 0.63
SRPRA-204ENST00000530680 ARFGEF2Q9Y6D5 1785 aa18.96■□□□□ 0.63
SRPRA-204ENST00000530680 NUP98P52948 1817 aa18.96■□□□□ 0.63
SRPRA-204ENST00000530680 DDX58O95786 925 aaKnown RBP18.96■□□□□ 0.63
SRPRA-204ENST00000530680 SLC4A2P04920 1241 aa18.96■□□□□ 0.63
SRPRA-204ENST00000530680 MSL1Q68DK7 614 aa18.96■□□□□ 0.63
SRPRA-204ENST00000530680 XAGE3Q8WTP9 111 aa18.96■□□□□ 0.63
SRPRA-204ENST00000530680 SMC4Q9NTJ3 1288 aa18.96■□□□□ 0.63
SRPRA-204ENST00000530680 SRP68Q9UHB9 627 aaKnown RBP18.96■□□□□ 0.63
SRPRA-204ENST00000530680 ANKRD36CQ5JPF3 1778 aa18.96■□□□□ 0.63
SRPRA-204ENST00000530680 PDIA6Q15084 440 aa18.95■□□□□ 0.62
SRPRA-204ENST00000530680 IFFO2Q5TF58 517 aa18.95■□□□□ 0.62
SRPRA-204ENST00000530680 USPL1Q5W0Q7 1092 aa18.95■□□□□ 0.62
SRPRA-204ENST00000530680 ZBTB3Q9H5J0 574 aa18.95■□□□□ 0.62
SRPRA-204ENST00000530680 COPS6Q7L5N1 327 aa18.94■□□□□ 0.62
SRPRA-204ENST00000530680 MAP3K15Q6ZN16 1313 aa18.94■□□□□ 0.62
SRPRA-204ENST00000530680 ATP10DQ9P241 1426 aa18.93■□□□□ 0.62
SRPRA-204ENST00000530680 ALDH1L2Q3SY69 923 aa18.93■□□□□ 0.62
SRPRA-204ENST00000530680 TTLL7Q6ZT98 887 aa18.93■□□□□ 0.62
SRPRA-204ENST00000530680 BCL2L13Q9BXK5 485 aa18.93■□□□□ 0.62
SRPRA-204ENST00000530680 NPHP1O15259 732 aa18.92■□□□□ 0.62
SRPRA-204ENST00000530680 FKBP5Q13451 457 aaPredicted RBP18.92■□□□□ 0.62
SRPRA-204ENST00000530680 RIC3Q7Z5B4 369 aa18.92■□□□□ 0.62
SRPRA-204ENST00000530680 NLGN1Q8N2Q7 840 aa18.92■□□□□ 0.62
SRPRA-204ENST00000530680 PHAXQ9H814 394 aaKnown RBP18.92■□□□□ 0.62
SRPRA-204ENST00000530680 AFDNP55196 1824 aaKnown RBP18.92■□□□□ 0.62
SRPRA-204ENST00000530680 CAMTA2O94983 1202 aa18.91■□□□□ 0.62
SRPRA-204ENST00000530680 GYS1P13807 737 aa18.91■□□□□ 0.62
SRPRA-204ENST00000530680 FLIIQ13045 1269 aa18.91■□□□□ 0.62
SRPRA-204ENST00000530680 ERVV-1B6SEH8 477 aa18.9■□□□□ 0.62
SRPRA-204ENST00000530680 HSP90AB3PQ58FF7 597 aa18.9■□□□□ 0.62
SRPRA-204ENST00000530680 BICDL1Q6ZP65 573 aa18.9■□□□□ 0.62
SRPRA-204ENST00000530680 SSH1Q8WYL5 1049 aa18.9■□□□□ 0.62
SRPRA-204ENST00000530680 CD2APQ9Y5K6 639 aa18.9■□□□□ 0.62
SRPRA-204ENST00000530680 FKBP8Q14318 412 aa18.89■□□□□ 0.61
SRPRA-204ENST00000530680 ANKRD13DQ6ZTN6 518 aa18.89■□□□□ 0.61
SRPRA-204ENST00000530680 PLBD2Q8NHP8 589 aa18.89■□□□□ 0.61
SRPRA-204ENST00000530680 KIF16BQ96L93 1317 aa18.89■□□□□ 0.61
SRPRA-204ENST00000530680 CLEC4GQ6UXB4 293 aa18.88■□□□□ 0.61
SRPRA-204ENST00000530680 LRP10Q7Z4F1 713 aa18.88■□□□□ 0.61
SRPRA-204ENST00000530680 GPBP1L1Q9HC44 474 aaPredicted RBP18.88■□□□□ 0.61
SRPRA-204ENST00000530680 PARP3Q9Y6F1 533 aa18.88■□□□□ 0.61
SRPRA-204ENST00000530680 RGL2O15211 777 aa18.87■□□□□ 0.61
SRPRA-204ENST00000530680 MMP10P09238 476 aa18.87■□□□□ 0.61
SRPRA-204ENST00000530680 RARSP54136 660 aaKnown RBP18.87■□□□□ 0.61
SRPRA-204ENST00000530680 NEXNQ0ZGT2 675 aa18.87■□□□□ 0.61
SRPRA-204ENST00000530680 G2E3Q7L622 706 aa18.87■□□□□ 0.61
SRPRA-204ENST00000530680 MRPL50Q8N5N7 158 aaKnown RBP18.87■□□□□ 0.61
SRPRA-204ENST00000530680 CARMIL3Q8ND23 1372 aa18.87■□□□□ 0.61
SRPRA-204ENST00000530680 SETDB2Q96T68 719 aa18.87■□□□□ 0.61
SRPRA-204ENST00000530680 NIP7Q9Y221 180 aaKnown RBP eCLIP18.87■□□□□ 0.61
SRPRA-204ENST00000530680 ADCY9O60503 1353 aa18.86■□□□□ 0.61
SRPRA-204ENST00000530680 PTPRCP08575 1304 aa18.86■□□□□ 0.61
SRPRA-204ENST00000530680 HLFQ16534 295 aa18.86■□□□□ 0.61
SRPRA-204ENST00000530680 GIGYF2Q6Y7W6 1299 aaKnown RBP18.86■□□□□ 0.61
SRPRA-204ENST00000530680 MAP3K2Q9Y2U5 619 aa18.86■□□□□ 0.61
SRPRA-204ENST00000530680 PI4KAP2A4QPH2 592 aa18.85■□□□□ 0.61
SRPRA-204ENST00000530680 GPTP24298 496 aa18.85■□□□□ 0.61
SRPRA-204ENST00000530680 TBC1D9BQ66K14 1250 aa18.85■□□□□ 0.61
SRPRA-204ENST00000530680 KSR2Q6VAB6 950 aa18.85■□□□□ 0.61
SRPRA-204ENST00000530680 PI4KAP1Q8N8J0 262 aa18.85■□□□□ 0.61
SRPRA-204ENST00000530680 FRAT1Q92837 279 aaPredicted RBP18.85■□□□□ 0.61
SRPRA-204ENST00000530680 BCL2L12Q9HB09 334 aa18.85■□□□□ 0.61
SRPRA-204ENST00000530680 GTF2E1P29083 439 aaPredicted RBP18.84■□□□□ 0.61
SRPRA-204ENST00000530680 NFIXQ14938 502 aa18.84■□□□□ 0.61
SRPRA-204ENST00000530680 MYD88Q99836 296 aa18.84■□□□□ 0.61
SRPRA-204ENST00000530680 RCAN3Q9UKA8 241 aa18.84■□□□□ 0.61
SRPRA-204ENST00000530680 FAM177BA6PVY3 158 aa18.83■□□□□ 0.6
SRPRA-204ENST00000530680 IPO8O15397 1037 aaKnown RBP18.83■□□□□ 0.6
SRPRA-204ENST00000530680 SLC4A10Q6U841 1118 aa18.83■□□□□ 0.6
SRPRA-204ENST00000530680 NBPF5PQ86XG9 351 aaPredicted RBP18.83■□□□□ 0.6
SRPRA-204ENST00000530680 PARP10Q53GL7 1025 aa18.82■□□□□ 0.6
SRPRA-204ENST00000530680 DNAAF4Q8WXU2 420 aa18.82■□□□□ 0.6
SRPRA-204ENST00000530680 NYXQ9GZU5 481 aa18.82■□□□□ 0.6
SRPRA-204ENST00000530680 N4BP2Q86UW6 1770 aaPredicted RBP18.81■□□□□ 0.6
SRPRA-204ENST00000530680 BCAR3O75815 825 aa18.81■□□□□ 0.6
SRPRA-204ENST00000530680 HSPA6P17066 643 aa18.81■□□□□ 0.6
SRPRA-204ENST00000530680 ST5P78524 1137 aa18.81■□□□□ 0.6
SRPRA-204ENST00000530680 TCIRG1Q13488 830 aa18.81■□□□□ 0.6
SRPRA-204ENST00000530680 PPP1R42Q7Z4L9 355 aa18.81■□□□□ 0.6
SRPRA-204ENST00000530680 CNBD1Q8NA66 436 aa18.81■□□□□ 0.6
SRPRA-204ENST00000530680 ZNF526Q8TF50 670 aaPredicted RBP18.81■□□□□ 0.6
SRPRA-204ENST00000530680 METTL22Q9BUU2 404 aaPredicted RBP18.81■□□□□ 0.6
SRPRA-204ENST00000530680 API5Q9BZZ5 524 aaKnown RBP18.81■□□□□ 0.6
SRPRA-204ENST00000530680 NOB1Q9ULX3 412 aaKnown RBP18.81■□□□□ 0.6
SRPRA-204ENST00000530680 PXDNLA1KZ92 1463 aa18.8■□□□□ 0.6
SRPRA-204ENST00000530680 ATP5J2-PTCD1G3V325 749 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms