RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 HSPA6P17066 643 aa23.31■■□□□ 1.32
CMTM1-213ENST00000529506 C16orf71Q8IYS4 520 aaPredicted RBP23.31■■□□□ 1.32
CMTM1-213ENST00000529506 MASTLQ96GX5 879 aa23.31■■□□□ 1.32
CMTM1-213ENST00000529506 DLEC1Q9Y238 1755 aa23.31■■□□□ 1.32
CMTM1-213ENST00000529506 SBF1O95248 1867 aa23.3■■□□□ 1.32
CMTM1-213ENST00000529506 ERVV-1B6SEH8 477 aa23.3■■□□□ 1.32
CMTM1-213ENST00000529506 TMPOP42166 694 aaKnown RBP23.3■■□□□ 1.32
CMTM1-213ENST00000529506 WDR43Q15061 677 aaKnown RBP eCLIP23.3■■□□□ 1.32
CMTM1-213ENST00000529506 SOGA3Q5TF21 947 aa23.3■■□□□ 1.32
CMTM1-213ENST00000529506 CCDC24Q8N4L8 307 aa23.3■■□□□ 1.32
CMTM1-213ENST00000529506 THUMPD2Q9BTF0 503 aaKnown RBP23.3■■□□□ 1.32
CMTM1-213ENST00000529506 TSPYL4Q9UJ04 414 aa23.3■■□□□ 1.32
CMTM1-213ENST00000529506 RRP7AQ9Y3A4 280 aaKnown RBP23.3■■□□□ 1.32
CMTM1-213ENST00000529506 SRGNP10124 158 aa23.29■■□□□ 1.32
CMTM1-213ENST00000529506 GTF2E1P29083 439 aaPredicted RBP23.29■■□□□ 1.32
CMTM1-213ENST00000529506 ERBB4Q15303 1308 aa23.29■■□□□ 1.32
CMTM1-213ENST00000529506 KIF6Q6ZMV9 814 aa23.28■■□□□ 1.32
CMTM1-213ENST00000529506 NMRK2Q9NPI5 230 aa23.28■■□□□ 1.32
CMTM1-213ENST00000529506 BCORQ6W2J9 1755 aa23.27■■□□□ 1.32
CMTM1-213ENST00000529506 C21orf2O43822 256 aa23.27■■□□□ 1.32
CMTM1-213ENST00000529506 NGEFQ8N5V2 710 aa23.27■■□□□ 1.32
CMTM1-213ENST00000529506 NYXQ9GZU5 481 aa23.27■■□□□ 1.32
CMTM1-213ENST00000529506 KDM3BQ7LBC6 1761 aa23.27■■□□□ 1.32
CMTM1-213ENST00000529506 ANKRD31Q8N7Z5 1873 aa23.26■■□□□ 1.31
CMTM1-213ENST00000529506 RASSF7Q02833 373 aa23.26■■□□□ 1.31
CMTM1-213ENST00000529506 RUNDC1Q96C34 613 aa23.26■■□□□ 1.31
CMTM1-213ENST00000529506 NPR1P16066 1061 aa23.25■■□□□ 1.31
CMTM1-213ENST00000529506 DPY19L2Q6NUT2 758 aa23.25■■□□□ 1.31
CMTM1-213ENST00000529506 RBM46Q8TBY0 533 aaKnown RBP23.25■■□□□ 1.31
CMTM1-213ENST00000529506 KLRG2A4D1S0 409 aaPredicted RBP23.24■■□□□ 1.31
CMTM1-213ENST00000529506 MYL6BP14649 208 aa23.24■■□□□ 1.31
CMTM1-213ENST00000529506 HLFQ16534 295 aa23.24■■□□□ 1.31
CMTM1-213ENST00000529506 RRAGCQ9HB90 399 aa23.24■■□□□ 1.31
CMTM1-213ENST00000529506 MAP3K15Q6ZN16 1313 aa23.24■■□□□ 1.31
CMTM1-213ENST00000529506 LAMB4A4D0S4 1761 aa23.24■■□□□ 1.31
CMTM1-213ENST00000529506 GLTPD2A6NH11 291 aa23.23■■□□□ 1.31
CMTM1-213ENST00000529506 NFKBIEO00221 500 aa23.23■■□□□ 1.31
CMTM1-213ENST00000529506 ALDH1B1P30837 517 aa23.23■■□□□ 1.31
CMTM1-213ENST00000529506 NEUROD2Q15784 382 aa23.23■■□□□ 1.31
CMTM1-213ENST00000529506 ZNF219Q9P2Y4 722 aaPredicted RBP23.23■■□□□ 1.31
CMTM1-213ENST00000529506 FAM177BA6PVY3 158 aa23.22■■□□□ 1.31
CMTM1-213ENST00000529506 PRPF40BQ6NWY9 871 aaKnown RBP23.22■■□□□ 1.31
CMTM1-213ENST00000529506 PRKRIP1Q9H875 184 aaPredicted RBP23.22■■□□□ 1.31
CMTM1-213ENST00000529506 EIF2S2P20042 333 aaKnown RBP23.21■■□□□ 1.31
CMTM1-213ENST00000529506 APLP1P51693 650 aa23.21■■□□□ 1.31
CMTM1-213ENST00000529506 FSTL1Q12841 308 aa23.21■■□□□ 1.31
CMTM1-213ENST00000529506 TAOK3Q9H2K8 898 aa23.21■■□□□ 1.31
CMTM1-213ENST00000529506 LTBP3Q9NS15 1303 aa23.21■■□□□ 1.31
CMTM1-213ENST00000529506 CCDC88AQ3V6T2 1871 aa23.21■■□□□ 1.31
CMTM1-213ENST00000529506 VEGFAP15692 232 aaPredicted RBP23.2■■□□□ 1.3
CMTM1-213ENST00000529506 ERFEQ4G0M1 354 aa23.2■■□□□ 1.3
CMTM1-213ENST00000529506 TTLL7Q6ZT98 887 aa23.2■■□□□ 1.3
CMTM1-213ENST00000529506 CCDC146Q8IYE0 955 aa23.2■■□□□ 1.3
CMTM1-213ENST00000529506 ADAMTS8Q9UP79 889 aa23.2■■□□□ 1.3
CMTM1-213ENST00000529506 ZEB1P37275 1124 aaPredicted RBP23.19■■□□□ 1.3
CMTM1-213ENST00000529506 CHL1O00533 1208 aa23.18■■□□□ 1.3
CMTM1-213ENST00000529506 GIGYF2Q6Y7W6 1299 aaKnown RBP23.18■■□□□ 1.3
CMTM1-213ENST00000529506 NUP98P52948 1817 aa23.17■■□□□ 1.3
CMTM1-213ENST00000529506 PRELPP51888 382 aa23.17■■□□□ 1.3
CMTM1-213ENST00000529506 PARP10Q53GL7 1025 aa23.17■■□□□ 1.3
CMTM1-213ENST00000529506 CCDC93Q567U6 631 aa23.17■■□□□ 1.3
CMTM1-213ENST00000529506 PPP1R42Q7Z4L9 355 aa23.17■■□□□ 1.3
CMTM1-213ENST00000529506 RTKN2Q8IZC4 609 aa23.17■■□□□ 1.3
CMTM1-213ENST00000529506 ZBTB3Q9H5J0 574 aa23.17■■□□□ 1.3
CMTM1-213ENST00000529506 SLX4Q8IY92 1834 aa23.17■■□□□ 1.3
CMTM1-213ENST00000529506 FER1L6Q2WGJ9 1857 aa23.16■■□□□ 1.3
CMTM1-213ENST00000529506 C7orf43Q8WVR3 580 aa23.16■■□□□ 1.3
CMTM1-213ENST00000529506 LAS1LQ9Y4W2 734 aaKnown RBP23.16■■□□□ 1.3
CMTM1-213ENST00000529506 ZNF34Q8IZ26 560 aa23.15■■□□□ 1.3
CMTM1-213ENST00000529506 SMC1BQ8NDV3 1235 aa23.15■■□□□ 1.3
CMTM1-213ENST00000529506 COL11A2P13942 1736 aaPredicted RBP23.15■■□□□ 1.3
CMTM1-213ENST00000529506 TNRC6CQ9HCJ0 1690 aaKnown RBP23.14■■□□□ 1.29
CMTM1-213ENST00000529506 GPTP24298 496 aa23.14■■□□□ 1.29
CMTM1-213ENST00000529506 PDIA6Q15084 440 aa23.14■■□□□ 1.29
CMTM1-213ENST00000529506 HSP90AB3PQ58FF7 597 aa23.14■■□□□ 1.29
CMTM1-213ENST00000529506 TRIM35Q9UPQ4 493 aa23.14■■□□□ 1.29
CMTM1-213ENST00000529506 IBTKQ9P2D0 1353 aaPredicted RBP23.14■■□□□ 1.29
CMTM1-213ENST00000529506 GRIPAP1Q4V328 841 aa23.13■■□□□ 1.29
CMTM1-213ENST00000529506 CC2D2BQ6DHV5 1058 aa23.13■■□□□ 1.29
CMTM1-213ENST00000529506 DICER1Q9UPY3 1922 aaKnown RBP23.13■■□□□ 1.29
CMTM1-213ENST00000529506 HOXB7P09629 217 aa23.12■■□□□ 1.29
CMTM1-213ENST00000529506 CALD1Q05682 793 aaKnown RBP23.12■■□□□ 1.29
CMTM1-213ENST00000529506 CRY2Q49AN0 593 aa23.12■■□□□ 1.29
CMTM1-213ENST00000529506 SUSD4Q5VX71 490 aa23.12■■□□□ 1.29
CMTM1-213ENST00000529506 NUTM1Q86Y26 1132 aa23.12■■□□□ 1.29
CMTM1-213ENST00000529506 RPGRQ92834 1020 aaKnown RBP23.12■■□□□ 1.29
CMTM1-213ENST00000529506 DDX21Q9NR30 783 aaKnown RBP eCLIP23.12■■□□□ 1.29
CMTM1-213ENST00000529506 ARFGEF2Q9Y6D5 1785 aa23.12■■□□□ 1.29
CMTM1-213ENST00000529506 FKBP4Q02790 459 aaKnown RBP eCLIP23.11■■□□□ 1.29
CMTM1-213ENST00000529506 CFAP44Q96MT7 982 aa23.11■■□□□ 1.29
CMTM1-213ENST00000529506 COPS6Q7L5N1 327 aa23.1■■□□□ 1.29
CMTM1-213ENST00000529506 LRP10Q7Z4F1 713 aa23.1■■□□□ 1.29
CMTM1-213ENST00000529506 RBM17Q96I25 401 aaKnown RBP23.1■■□□□ 1.29
CMTM1-213ENST00000529506 NLRP3Q96P20 1036 aa23.1■■□□□ 1.29
CMTM1-213ENST00000529506 UTP14AQ9BVJ6 771 aaKnown RBP23.1■■□□□ 1.29
CMTM1-213ENST00000529506 CACNA1SQ13698 1873 aa23.1■■□□□ 1.29
CMTM1-213ENST00000529506 HOXA10P31260 410 aaPredicted RBP23.09■■□□□ 1.29
CMTM1-213ENST00000529506 TMX4Q9H1E5 349 aaPredicted RBP23.09■■□□□ 1.29
CMTM1-213ENST00000529506 RNF123Q5XPI4 1314 aa23.08■■□□□ 1.29
CMTM1-213ENST00000529506 UBN2Q6ZU65 1347 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms