RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 PAPPAQ13219 1627 aa19.28■□□□□ 0.68
TM9SF1-208ENST00000529332 TUBGCP6Q96RT7 1819 aa19.28■□□□□ 0.68
TM9SF1-208ENST00000529332 GNAI3P08754 354 aa19.27■□□□□ 0.68
TM9SF1-208ENST00000529332 NUCB2P80303 420 aa19.27■□□□□ 0.68
TM9SF1-208ENST00000529332 ATP8B2P98198 1209 aa19.27■□□□□ 0.68
TM9SF1-208ENST00000529332 ZGPATQ8N5A5 531 aaKnown RBP19.27■□□□□ 0.68
TM9SF1-208ENST00000529332 GIGYF1O75420 1035 aaPredicted RBP19.27■□□□□ 0.67
TM9SF1-208ENST00000529332 BARGINQ6ZT62 677 aa19.27■□□□□ 0.67
TM9SF1-208ENST00000529332 FNBP4Q8N3X1 1017 aaPredicted RBP19.27■□□□□ 0.67
TM9SF1-208ENST00000529332 LRRCC1Q9C099 1032 aa19.27■□□□□ 0.67
TM9SF1-208ENST00000529332 BCL9LQ86UU0 1499 aa19.26■□□□□ 0.67
TM9SF1-208ENST00000529332 UBR2Q8IWV8 1755 aa19.26■□□□□ 0.67
TM9SF1-208ENST00000529332 KLHL40Q2TBA0 621 aa19.26■□□□□ 0.67
TM9SF1-208ENST00000529332 MEX3CQ5U5Q3 659 aaKnown RBP19.26■□□□□ 0.67
TM9SF1-208ENST00000529332 C5P01031 1676 aa19.26■□□□□ 0.67
TM9SF1-208ENST00000529332 IBTKQ9P2D0 1353 aaPredicted RBP19.26■□□□□ 0.67
TM9SF1-208ENST00000529332 SLC39A6Q13433 755 aa19.25■□□□□ 0.67
TM9SF1-208ENST00000529332 VPS72Q15906 364 aa19.25■□□□□ 0.67
TM9SF1-208ENST00000529332 ITGB4P16144 1822 aa19.25■□□□□ 0.67
TM9SF1-208ENST00000529332 EIF2S2P20042 333 aaKnown RBP19.25■□□□□ 0.67
TM9SF1-208ENST00000529332 CWC22Q9HCG8 908 aaKnown RBP19.25■□□□□ 0.67
TM9SF1-208ENST00000529332 DDX49Q9Y6V7 483 aaKnown RBP19.25■□□□□ 0.67
TM9SF1-208ENST00000529332 LAMB4A4D0S4 1761 aa19.25■□□□□ 0.67
TM9SF1-208ENST00000529332 MX1P20591 662 aa19.24■□□□□ 0.67
TM9SF1-208ENST00000529332 DDB1Q16531 1140 aa19.24■□□□□ 0.67
TM9SF1-208ENST00000529332 MCTP1Q6DN14 999 aa19.24■□□□□ 0.67
TM9SF1-208ENST00000529332 FMNL2Q96PY5 1086 aa19.24■□□□□ 0.67
TM9SF1-208ENST00000529332 LRRFIP2Q9Y608 721 aaKnown RBP19.24■□□□□ 0.67
TM9SF1-208ENST00000529332 ESYT1Q9BSJ8 1104 aa19.24■□□□□ 0.67
TM9SF1-208ENST00000529332 N4BP2Q86UW6 1770 aaPredicted RBP19.23■□□□□ 0.67
TM9SF1-208ENST00000529332 USP44Q9H0E7 712 aa19.23■□□□□ 0.67
TM9SF1-208ENST00000529332 TMOD3Q9NYL9 352 aa19.23■□□□□ 0.67
TM9SF1-208ENST00000529332 ZDHHC9Q9Y397 364 aa19.23■□□□□ 0.67
TM9SF1-208ENST00000529332 LMBRD1Q9NUN5 540 aa19.22■□□□□ 0.67
TM9SF1-208ENST00000529332 DBF4Q9UBU7 674 aaPredicted RBP19.22■□□□□ 0.67
TM9SF1-208ENST00000529332 USP21Q9UK80 565 aa19.22■□□□□ 0.67
TM9SF1-208ENST00000529332 ZNF496Q96IT1 587 aaPredicted RBP19.22■□□□□ 0.67
TM9SF1-208ENST00000529332 SNRPA1P09661 255 aaKnown RBP19.21■□□□□ 0.67
TM9SF1-208ENST00000529332 CLCN1P35523 988 aa19.21■□□□□ 0.67
TM9SF1-208ENST00000529332 CHPF2Q9P2E5 772 aa19.21■□□□□ 0.67
TM9SF1-208ENST00000529332 STAP2Q9UGK3 403 aa19.21■□□□□ 0.67
TM9SF1-208ENST00000529332 DOT1LQ8TEK3 1739 aa19.21■□□□□ 0.67
TM9SF1-208ENST00000529332 PXDNLA1KZ92 1463 aa19.21■□□□□ 0.67
TM9SF1-208ENST00000529332 CHMLP26374 656 aa19.21■□□□□ 0.67
TM9SF1-208ENST00000529332 GLI3P10071 1580 aa19.2■□□□□ 0.66
TM9SF1-208ENST00000529332 NEK4P51957 841 aa19.2■□□□□ 0.66
TM9SF1-208ENST00000529332 PHAXQ9H814 394 aaKnown RBP19.2■□□□□ 0.66
TM9SF1-208ENST00000529332 PALD1Q9ULE6 856 aa19.2■□□□□ 0.66
TM9SF1-208ENST00000529332 FBXO41Q8TF61 875 aa19.19■□□□□ 0.66
TM9SF1-208ENST00000529332 RILPL2Q969X0 211 aa19.19■□□□□ 0.66
TM9SF1-208ENST00000529332 ERBB4Q15303 1308 aa19.19■□□□□ 0.66
TM9SF1-208ENST00000529332 KCPQ6ZWJ8 1503 aa19.19■□□□□ 0.66
TM9SF1-208ENST00000529332 TRIM6-TRIM34B2RNG4 842 aa19.18■□□□□ 0.66
TM9SF1-208ENST00000529332 UBTFL1P0CB47 393 aaPredicted RBP19.18■□□□□ 0.66
TM9SF1-208ENST00000529332 TMX3Q96JJ7 454 aa19.18■□□□□ 0.66
TM9SF1-208ENST00000529332 HYPKQ9NX55 129 aa19.18■□□□□ 0.66
TM9SF1-208ENST00000529332 SSH3Q8TE77 659 aa19.17■□□□□ 0.66
TM9SF1-208ENST00000529332 CHAMP1Q96JM3 812 aa19.17■□□□□ 0.66
TM9SF1-208ENST00000529332 PRAMEF22A3QJZ6 481 aa19.16■□□□□ 0.66
TM9SF1-208ENST00000529332 FAM98CQ17RN3 349 aaKnown RBP19.16■□□□□ 0.66
TM9SF1-208ENST00000529332 CAVIN1Q6NZI2 390 aaKnown RBP19.16■□□□□ 0.66
TM9SF1-208ENST00000529332 SRCIN1Q9C0H9 1055 aa19.16■□□□□ 0.66
TM9SF1-208ENST00000529332 IL1RAPL2Q9NP60 686 aa19.16■□□□□ 0.66
TM9SF1-208ENST00000529332 ANO2Q9NQ90 1003 aa19.16■□□□□ 0.66
TM9SF1-208ENST00000529332 DDX21Q9NR30 783 aaKnown RBP eCLIP19.16■□□□□ 0.66
TM9SF1-208ENST00000529332 BCL9O00512 1426 aa19.16■□□□□ 0.66
TM9SF1-208ENST00000529332 ESPNB1AK53 854 aa19.16■□□□□ 0.66
TM9SF1-208ENST00000529332 ZNF445P59923 1031 aa19.16■□□□□ 0.66
TM9SF1-208ENST00000529332 AFF2P51816 1311 aa19.16■□□□□ 0.66
TM9SF1-208ENST00000529332 KAT6BQ8WYB5 2073 aa19.15■□□□□ 0.66
TM9SF1-208ENST00000529332 NCLP19338 710 aaKnown RBP19.15■□□□□ 0.66
TM9SF1-208ENST00000529332 IL25Q9H293 177 aa19.15■□□□□ 0.66
TM9SF1-208ENST00000529332 THSD7AQ9UPZ6 1657 aa19.15■□□□□ 0.66
TM9SF1-208ENST00000529332 PRPF40AO75400 957 aaKnown RBP19.15■□□□□ 0.66
TM9SF1-208ENST00000529332 NASPP49321 788 aaPredicted RBP19.15■□□□□ 0.66
TM9SF1-208ENST00000529332 ZSCAN23Q3MJ62 389 aa19.15■□□□□ 0.66
TM9SF1-208ENST00000529332 PIGBQ92521 554 aa19.15■□□□□ 0.66
TM9SF1-208ENST00000529332 AOX1Q06278 1338 aa19.15■□□□□ 0.66
TM9SF1-208ENST00000529332 MCCP23508 829 aa19.14■□□□□ 0.65
TM9SF1-208ENST00000529332 ANAPC15P60006 121 aa19.14■□□□□ 0.65
TM9SF1-208ENST00000529332 POLA2Q14181 598 aa19.14■□□□□ 0.65
TM9SF1-208ENST00000529332 PPP1R42Q7Z4L9 355 aa19.14■□□□□ 0.65
TM9SF1-208ENST00000529332 NUTM1Q86Y26 1132 aa19.14■□□□□ 0.65
TM9SF1-208ENST00000529332 GPT2Q8TD30 523 aa19.14■□□□□ 0.65
TM9SF1-208ENST00000529332 MCM2P49736 904 aa19.13■□□□□ 0.65
TM9SF1-208ENST00000529332 CUL4AQ13619 759 aa19.13■□□□□ 0.65
TM9SF1-208ENST00000529332 DDX58O95786 925 aaKnown RBP19.13■□□□□ 0.65
TM9SF1-208ENST00000529332 MARCH10Q8NA82 808 aaPredicted RBP19.13■□□□□ 0.65
TM9SF1-208ENST00000529332 TRIM44Q96DX7 344 aaPredicted RBP19.13■□□□□ 0.65
TM9SF1-208ENST00000529332 IL17RAQ96F46 866 aa19.13■□□□□ 0.65
TM9SF1-208ENST00000529332 A0A0G2JS52 829 aa19.12■□□□□ 0.65
TM9SF1-208ENST00000529332 SYTL4Q96C24 671 aaPredicted RBP19.12■□□□□ 0.65
TM9SF1-208ENST00000529332 PPP1R9BQ96SB3 815 aa19.12■□□□□ 0.65
TM9SF1-208ENST00000529332 ATRNO75882 1429 aa19.12■□□□□ 0.65
TM9SF1-208ENST00000529332 PTCD1O75127 700 aaKnown RBP19.12■□□□□ 0.65
TM9SF1-208ENST00000529332 SURF6O75683 361 aaKnown RBP19.12■□□□□ 0.65
TM9SF1-208ENST00000529332 ANXA1P04083 346 aa19.12■□□□□ 0.65
TM9SF1-208ENST00000529332 CCDC173Q0VFZ6 552 aa19.12■□□□□ 0.65
TM9SF1-208ENST00000529332 FOXD4L5Q5VV16 416 aaPredicted RBP19.12■□□□□ 0.65
TM9SF1-208ENST00000529332 FOXD4L4Q8WXT5 416 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms