RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 PRAMEF22A3QJZ6 481 aa10.04□□□□□ -0.8
SSBP3-211ENST00000528787 NBPF26B4DH59 902 aa10.04□□□□□ -0.8
SSBP3-211ENST00000528787 PDE3AQ14432 1141 aa10.04□□□□□ -0.8
SSBP3-211ENST00000528787 PDIA6Q15084 440 aa10.04□□□□□ -0.8
SSBP3-211ENST00000528787 NBPF10Q6P3W6 841 aaKnown RBP10.04□□□□□ -0.8
SSBP3-211ENST00000528787 GIGYF2Q6Y7W6 1299 aaKnown RBP10.04□□□□□ -0.8
SSBP3-211ENST00000528787 PPP1R42Q7Z4L9 355 aa10.04□□□□□ -0.8
SSBP3-211ENST00000528787 MRPL50Q8N5N7 158 aaKnown RBP10.04□□□□□ -0.8
SSBP3-211ENST00000528787 NBPF15Q8N660 670 aa10.04□□□□□ -0.8
SSBP3-211ENST00000528787 XAGE3Q8WTP9 111 aa10.04□□□□□ -0.8
SSBP3-211ENST00000528787 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
SSBP3-211ENST00000528787 NUP98P52948 1817 aa10.04□□□□□ -0.8
SSBP3-211ENST00000528787 USP42Q9H9J4 1324 aaKnown RBP10.04□□□□□ -0.8
SSBP3-211ENST00000528787 ANKRD36CQ5JPF3 1778 aa10.03□□□□□ -0.8
SSBP3-211ENST00000528787 BCORQ6W2J9 1755 aa10.03□□□□□ -0.8
SSBP3-211ENST00000528787 SCN7AQ01118 1682 aa10.03□□□□□ -0.8
SSBP3-211ENST00000528787 NPHP1O15259 732 aa10.03□□□□□ -0.8
SSBP3-211ENST00000528787 ALDH1L1O75891 902 aa10.03□□□□□ -0.8
SSBP3-211ENST00000528787 PHF14O94880 888 aa10.03□□□□□ -0.8
SSBP3-211ENST00000528787 C4AP0C0L4 1744 aa10.03□□□□□ -0.8
SSBP3-211ENST00000528787 POLD1P28340 1107 aa10.03□□□□□ -0.8
SSBP3-211ENST00000528787 AIMP1Q12904 312 aaKnown RBP10.03□□□□□ -0.8
SSBP3-211ENST00000528787 ATF7IPQ6VMQ6 1270 aa10.03□□□□□ -0.8
SSBP3-211ENST00000528787 DNAAF4Q8WXU2 420 aa10.03□□□□□ -0.8
SSBP3-211ENST00000528787 ARHGEF1Q92888 912 aaKnown RBP10.03□□□□□ -0.8
SSBP3-211ENST00000528787 SETDB2Q96T68 719 aa10.03□□□□□ -0.8
SSBP3-211ENST00000528787 PDZRN3Q9UPQ7 1066 aa10.03□□□□□ -0.8
SSBP3-211ENST00000528787 ATP10DQ9P241 1426 aa10.02□□□□□ -0.81
SSBP3-211ENST00000528787 ARFGEF2Q9Y6D5 1785 aa10.02□□□□□ -0.81
SSBP3-211ENST00000528787 NEFLP07196 543 aa10.02□□□□□ -0.81
SSBP3-211ENST00000528787 KCNQ4P56696 695 aa10.02□□□□□ -0.81
SSBP3-211ENST00000528787 TRIM28Q13263 835 aaKnown RBP10.02□□□□□ -0.81
SSBP3-211ENST00000528787 TCIRG1Q13488 830 aa10.02□□□□□ -0.81
SSBP3-211ENST00000528787 TPTE2Q6XPS3 522 aa10.02□□□□□ -0.81
SSBP3-211ENST00000528787 CCDC191Q8NCU4 936 aa10.02□□□□□ -0.81
SSBP3-211ENST00000528787 LINS1Q8NG48 757 aa10.02□□□□□ -0.81
SSBP3-211ENST00000528787 FRAT1Q92837 279 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-211ENST00000528787 MTFR1LQ9H019 292 aa10.02□□□□□ -0.81
SSBP3-211ENST00000528787 NOB1Q9ULX3 412 aaKnown RBP10.02□□□□□ -0.81
SSBP3-211ENST00000528787 TUBGCP6Q96RT7 1819 aa10.02□□□□□ -0.81
SSBP3-211ENST00000528787 PNPLA7Q6ZV29 1317 aa10.02□□□□□ -0.81
SSBP3-211ENST00000528787 CARMIL3Q8ND23 1372 aa10.01□□□□□ -0.81
SSBP3-211ENST00000528787 N4BP2Q86UW6 1770 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-211ENST00000528787 PI4KAP2A4QPH2 592 aa10.01□□□□□ -0.81
SSBP3-211ENST00000528787 GTF2E1P29083 439 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-211ENST00000528787 ZNF827Q17R98 1081 aa10.01□□□□□ -0.81
SSBP3-211ENST00000528787 DZIP1LQ8IYY4 767 aaKnown RBP10.01□□□□□ -0.81
SSBP3-211ENST00000528787 PI4KAP1Q8N8J0 262 aa10.01□□□□□ -0.81
SSBP3-211ENST00000528787 METTL22Q9BUU2 404 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-211ENST00000528787 SRCIN1Q9C0H9 1055 aa10.01□□□□□ -0.81
SSBP3-211ENST00000528787 TBC1D2BQ9UPU7 963 aa10.01□□□□□ -0.81
SSBP3-211ENST00000528787 MAP3K2Q9Y2U5 619 aa10.01□□□□□ -0.81
SSBP3-211ENST00000528787 PARP3Q9Y6F1 533 aa10.01□□□□□ -0.81
SSBP3-211ENST00000528787 AFDNP55196 1824 aaKnown RBP10□□□□□ -0.81
SSBP3-211ENST00000528787 CAMTA2O94983 1202 aa10□□□□□ -0.81
SSBP3-211ENST00000528787 PROSER3Q2NL68 480 aa10□□□□□ -0.81
SSBP3-211ENST00000528787 USPL1Q5W0Q7 1092 aa10□□□□□ -0.81
SSBP3-211ENST00000528787 SLC4A10Q6U841 1118 aa10□□□□□ -0.81
SSBP3-211ENST00000528787 LRP10Q7Z4F1 713 aa10□□□□□ -0.81
SSBP3-211ENST00000528787 COL23A1Q86Y22 540 aaPredicted RBP10□□□□□ -0.81
SSBP3-211ENST00000528787 BCL2L13Q9BXK5 485 aa10□□□□□ -0.81
SSBP3-211ENST00000528787 ZBTB3Q9H5J0 574 aa10□□□□□ -0.81
SSBP3-211ENST00000528787 PHAXQ9H814 394 aaKnown RBP10□□□□□ -0.81
SSBP3-211ENST00000528787 CWC25Q9NXE8 425 aaPredicted RBP10□□□□□ -0.81
SSBP3-211ENST00000528787 DDX19BQ9UMR2 479 aa10□□□□□ -0.81
SSBP3-211ENST00000528787 NIP7Q9Y221 180 aaKnown RBP eCLIP10□□□□□ -0.81
SSBP3-211ENST00000528787 BCAR3O75815 825 aa9.99□□□□□ -0.81
SSBP3-211ENST00000528787 GNAI3P08754 354 aa9.99□□□□□ -0.81
SSBP3-211ENST00000528787 RRP1P56182 461 aaKnown RBP9.99□□□□□ -0.81
SSBP3-211ENST00000528787 ST5P78524 1137 aa9.99□□□□□ -0.81
SSBP3-211ENST00000528787 UTP14AQ9BVJ6 771 aaKnown RBP9.99□□□□□ -0.81
SSBP3-211ENST00000528787 C9orf78Q9NZ63 289 aaPredicted RBP9.99□□□□□ -0.81
SSBP3-211ENST00000528787 ANXA1P04083 346 aa9.98□□□□□ -0.81
SSBP3-211ENST00000528787 GYS1P13807 737 aa9.98□□□□□ -0.81
SSBP3-211ENST00000528787 TRIM27P14373 513 aa9.98□□□□□ -0.81
SSBP3-211ENST00000528787 R3HDM1Q15032 1099 aaKnown RBP9.98□□□□□ -0.81
SSBP3-211ENST00000528787 INTS3Q68E01 1043 aaKnown RBP9.98□□□□□ -0.81
SSBP3-211ENST00000528787 TTLL7Q6ZT98 887 aa9.98□□□□□ -0.81
SSBP3-211ENST00000528787 NBPF5PQ86XG9 351 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-211ENST00000528787 ZNF34Q8IZ26 560 aa9.98□□□□□ -0.81
SSBP3-211ENST00000528787 SPON1Q9HCB6 807 aa9.98□□□□□ -0.81
SSBP3-211ENST00000528787 ANO8Q9HCE9 1232 aaPredicted RBP9.98□□□□□ -0.81
SSBP3-211ENST00000528787 ABCC4O15439 1325 aa9.98□□□□□ -0.81
SSBP3-211ENST00000528787 ADCY9O60503 1353 aa9.98□□□□□ -0.81
SSBP3-211ENST00000528787 CASZ1Q86V15 1759 aa9.97□□□□□ -0.81
SSBP3-211ENST00000528787 TCERG1O14776 1098 aaKnown RBP9.97□□□□□ -0.81
SSBP3-211ENST00000528787 PIP4K2AP48426 406 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-211ENST00000528787 G2E3Q7L622 706 aa9.97□□□□□ -0.81
SSBP3-211ENST00000528787 CNBD1Q8NA66 436 aa9.97□□□□□ -0.81
SSBP3-211ENST00000528787 ZBTB38Q8NAP3 1195 aaPredicted RBP9.97□□□□□ -0.81
SSBP3-211ENST00000528787 MYD88Q99836 296 aa9.97□□□□□ -0.81
SSBP3-211ENST00000528787 ISCA1Q9BUE6 129 aa9.97□□□□□ -0.81
SSBP3-211ENST00000528787 SH3TC1Q8TE82 1336 aa9.97□□□□□ -0.81
SSBP3-211ENST00000528787 PCCAP05165 728 aaPredicted RBP9.96□□□□□ -0.82
SSBP3-211ENST00000528787 PDE6BP35913 854 aa9.96□□□□□ -0.82
SSBP3-211ENST00000528787 GCKRQ14397 625 aa9.96□□□□□ -0.82
SSBP3-211ENST00000528787 BEND3Q5T5X7 828 aa9.96□□□□□ -0.82
SSBP3-211ENST00000528787 ITPRIPQ8IWB1 547 aa9.96□□□□□ -0.82
SSBP3-211ENST00000528787 TRMT112Q9UI30 125 aaKnown RBP9.96□□□□□ -0.82
SSBP3-211ENST00000528787 CDHR2Q9BYE9 1310 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms