RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 TTLL7Q6ZT98 887 aa18.6■□□□□ 0.57
CAPN1-216ENST00000528739 ZBTB3Q9H5J0 574 aa18.6■□□□□ 0.57
CAPN1-216ENST00000528739 UTRNP46939 3433 aa18.6■□□□□ 0.57
CAPN1-216ENST00000528739 N4BP2Q86UW6 1770 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-216ENST00000528739 ANXA1P04083 346 aa18.59■□□□□ 0.57
CAPN1-216ENST00000528739 AIMP1Q12904 312 aaKnown RBP18.59■□□□□ 0.57
CAPN1-216ENST00000528739 TPTE2Q6XPS3 522 aa18.59■□□□□ 0.57
CAPN1-216ENST00000528739 CFAP44Q96MT7 982 aa18.59■□□□□ 0.57
CAPN1-216ENST00000528739 BRIP1Q9BX63 1249 aa18.59■□□□□ 0.57
CAPN1-216ENST00000528739 KDM3BQ7LBC6 1761 aa18.58■□□□□ 0.57
CAPN1-216ENST00000528739 TTLL6Q8N841 843 aa18.58■□□□□ 0.56
CAPN1-216ENST00000528739 ZNF526Q8TF50 670 aaPredicted RBP18.58■□□□□ 0.56
CAPN1-216ENST00000528739 SALL2Q9Y467 1007 aaPredicted RBP18.58■□□□□ 0.56
CAPN1-216ENST00000528739 ERBB4Q15303 1308 aa18.57■□□□□ 0.56
CAPN1-216ENST00000528739 MAP3K15Q6ZN16 1313 aa18.57■□□□□ 0.56
CAPN1-216ENST00000528739 ERVV-1B6SEH8 477 aa18.57■□□□□ 0.56
CAPN1-216ENST00000528739 GNAI1P63096 354 aa18.57■□□□□ 0.56
CAPN1-216ENST00000528739 ZNF219Q9P2Y4 722 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-216ENST00000528739 GPTP24298 496 aa18.56■□□□□ 0.56
CAPN1-216ENST00000528739 HDGFL1Q5TGJ6 251 aa18.56■□□□□ 0.56
CAPN1-216ENST00000528739 FAM9BQ8IZU0 186 aa18.56■□□□□ 0.56
CAPN1-216ENST00000528739 MBIPQ9NS73 344 aa18.56■□□□□ 0.56
CAPN1-216ENST00000528739 CHD4Q14839 1912 aa18.56■□□□□ 0.56
CAPN1-216ENST00000528739 KIF13BQ9NQT8 1826 aa18.56■□□□□ 0.56
CAPN1-216ENST00000528739 ELL2O00472 640 aaPredicted RBP18.55■□□□□ 0.56
CAPN1-216ENST00000528739 IFT57Q9NWB7 429 aa18.55■□□□□ 0.56
CAPN1-216ENST00000528739 PDZRN3Q9UPQ7 1066 aa18.55■□□□□ 0.56
CAPN1-216ENST00000528739 GOLGB1Q14789 3259 aaKnown RBP18.55■□□□□ 0.56
CAPN1-216ENST00000528739 SCN7AQ01118 1682 aa18.54■□□□□ 0.56
CAPN1-216ENST00000528739 PROSER3Q2NL68 480 aa18.54■□□□□ 0.56
CAPN1-216ENST00000528739 DUSP27Q5VZP5 1158 aa18.54■□□□□ 0.56
CAPN1-216ENST00000528739 COPS6Q7L5N1 327 aa18.54■□□□□ 0.56
CAPN1-216ENST00000528739 NYXQ9GZU5 481 aa18.54■□□□□ 0.56
CAPN1-216ENST00000528739 RGL2O15211 777 aa18.53■□□□□ 0.56
CAPN1-216ENST00000528739 PDIA6Q15084 440 aa18.53■□□□□ 0.56
CAPN1-216ENST00000528739 XAGE3Q8WTP9 111 aa18.53■□□□□ 0.56
CAPN1-216ENST00000528739 CHPF2Q9P2E5 772 aa18.53■□□□□ 0.56
CAPN1-216ENST00000528739 LAMB4A4D0S4 1761 aa18.53■□□□□ 0.56
CAPN1-216ENST00000528739 AFDNP55196 1824 aaKnown RBP18.52■□□□□ 0.56
CAPN1-216ENST00000528739 GPBP1L1Q9HC44 474 aaPredicted RBP18.52■□□□□ 0.56
CAPN1-216ENST00000528739 DDX21Q9NR30 783 aaKnown RBP eCLIP18.52■□□□□ 0.56
CAPN1-216ENST00000528739 ATP10DQ9P241 1426 aa18.51■□□□□ 0.55
CAPN1-216ENST00000528739 C9orf131Q5VYM1 1079 aa18.51■□□□□ 0.55
CAPN1-216ENST00000528739 GIGYF2Q6Y7W6 1299 aaKnown RBP18.51■□□□□ 0.55
CAPN1-216ENST00000528739 NUTM1Q86Y26 1132 aa18.51■□□□□ 0.55
CAPN1-216ENST00000528739 CNKSR1Q969H4 720 aa18.51■□□□□ 0.55
CAPN1-216ENST00000528739 MASTLQ96GX5 879 aa18.51■□□□□ 0.55
CAPN1-216ENST00000528739 KIAA1551Q9HCM1 1747 aa18.51■□□□□ 0.55
CAPN1-216ENST00000528739 C21orf2O43822 256 aa18.5■□□□□ 0.55
CAPN1-216ENST00000528739 HOXB7P09629 217 aa18.5■□□□□ 0.55
CAPN1-216ENST00000528739 ZNF853P0CG23 659 aa18.5■□□□□ 0.55
CAPN1-216ENST00000528739 PPP1R42Q7Z4L9 355 aa18.5■□□□□ 0.55
CAPN1-216ENST00000528739 RNF181Q9P0P0 153 aa18.5■□□□□ 0.55
CAPN1-216ENST00000528739 DBF4Q9UBU7 674 aaPredicted RBP18.5■□□□□ 0.55
CAPN1-216ENST00000528739 SRGNP10124 158 aa18.49■□□□□ 0.55
CAPN1-216ENST00000528739 SUSD4Q5VX71 490 aa18.49■□□□□ 0.55
CAPN1-216ENST00000528739 STYK1Q6J9G0 422 aa18.49■□□□□ 0.55
CAPN1-216ENST00000528739 WWC1Q8IX03 1113 aa18.49■□□□□ 0.55
CAPN1-216ENST00000528739 NRXN2Q9P2S2 1712 aa18.49■□□□□ 0.55
CAPN1-216ENST00000528739 BCORQ6W2J9 1755 aa18.48■□□□□ 0.55
CAPN1-216ENST00000528739 RASSF7Q02833 373 aa18.48■□□□□ 0.55
CAPN1-216ENST00000528739 ERFEQ4G0M1 354 aa18.48■□□□□ 0.55
CAPN1-216ENST00000528739 HSP90AB3PQ58FF7 597 aa18.48■□□□□ 0.55
CAPN1-216ENST00000528739 NPR1P16066 1061 aa18.47■□□□□ 0.55
CAPN1-216ENST00000528739 PARP10Q53GL7 1025 aa18.47■□□□□ 0.55
CAPN1-216ENST00000528739 LRP10Q7Z4F1 713 aa18.47■□□□□ 0.55
CAPN1-216ENST00000528739 ZNF34Q8IZ26 560 aa18.47■□□□□ 0.55
CAPN1-216ENST00000528739 TSR2Q969E8 191 aaKnown RBP18.47■□□□□ 0.55
CAPN1-216ENST00000528739 HYPKQ9NX55 129 aa18.47■□□□□ 0.55
CAPN1-216ENST00000528739 UBN2Q6ZU65 1347 aa18.47■□□□□ 0.55
CAPN1-216ENST00000528739 CCDC27Q2M243 656 aa18.46■□□□□ 0.55
CAPN1-216ENST00000528739 PRPF40BQ6NWY9 871 aaKnown RBP18.46■□□□□ 0.55
CAPN1-216ENST00000528739 C8orf58Q8NAV2 365 aa18.46■□□□□ 0.55
CAPN1-216ENST00000528739 ZNF428Q96B54 188 aa18.46■□□□□ 0.55
CAPN1-216ENST00000528739 UTP14AQ9BVJ6 771 aaKnown RBP18.46■□□□□ 0.55
CAPN1-216ENST00000528739 ANKRD13DQ6ZTN6 518 aa18.45■□□□□ 0.54
CAPN1-216ENST00000528739 RPGRQ92834 1020 aaKnown RBP18.45■□□□□ 0.54
CAPN1-216ENST00000528739 CHMP4AQ9BY43 222 aa18.45■□□□□ 0.54
CAPN1-216ENST00000528739 ALDH1B1P30837 517 aa18.44■□□□□ 0.54
CAPN1-216ENST00000528739 TCIRG1Q13488 830 aa18.44■□□□□ 0.54
CAPN1-216ENST00000528739 CCDC30Q5VVM6 783 aa18.44■□□□□ 0.54
CAPN1-216ENST00000528739 RIC3Q7Z5B4 369 aa18.44■□□□□ 0.54
CAPN1-216ENST00000528739 LMNB1P20700 586 aa18.43■□□□□ 0.54
CAPN1-216ENST00000528739 GOLGA2Q08379 1002 aa18.43■□□□□ 0.54
CAPN1-216ENST00000528739 SOGA3Q5TF21 947 aa18.43■□□□□ 0.54
CAPN1-216ENST00000528739 PLBD2Q8NHP8 589 aa18.43■□□□□ 0.54
CAPN1-216ENST00000528739 NLRP3Q96P20 1036 aa18.43■□□□□ 0.54
CAPN1-216ENST00000528739 TRMT112Q9UI30 125 aaKnown RBP18.43■□□□□ 0.54
CAPN1-216ENST00000528739 ADCY9O60503 1353 aa18.42■□□□□ 0.54
CAPN1-216ENST00000528739 TCERG1O14776 1098 aaKnown RBP18.42■□□□□ 0.54
CAPN1-216ENST00000528739 NTSR2O95665 410 aa18.42■□□□□ 0.54
CAPN1-216ENST00000528739 TSPYL6Q8N831 410 aa18.42■□□□□ 0.54
CAPN1-216ENST00000528739 ABCC12Q96J65 1359 aa18.42■□□□□ 0.54
CAPN1-216ENST00000528739 BRCA1P38398 1863 aaKnown RBP18.41■□□□□ 0.54
CAPN1-216ENST00000528739 ATP5J2-PTCD1G3V325 749 aa18.41■□□□□ 0.54
CAPN1-216ENST00000528739 C1QTNF8P60827 252 aa18.41■□□□□ 0.54
CAPN1-216ENST00000528739 NLRP10Q86W26 655 aa18.41■□□□□ 0.54
CAPN1-216ENST00000528739 RBM17Q96I25 401 aaKnown RBP18.41■□□□□ 0.54
CAPN1-216ENST00000528739 STK31Q9BXU1 1019 aa18.41■□□□□ 0.54
CAPN1-216ENST00000528739 PHAXQ9H814 394 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms