RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	ISY1	Q9ULR0	285 aa	Known RBP	12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	COL15A1	P39059	1388 aa		12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	MEGF6	O75095	1541 aa		12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	LAMB4	A4D0S4	1761 aa		12.48	□□□□□ -0.41
PGAP2-231	ENST00000528216	NUCB2	P80303	420 aa		12.47	□□□□□ -0.41
PGAP2-231	ENST00000528216	NEXN	Q0ZGT2	675 aa		12.47	□□□□□ -0.41
PGAP2-231	ENST00000528216	RAB3GAP1	Q15042	981 aa		12.47	□□□□□ -0.41
PGAP2-231	ENST00000528216	POTEA	Q6S8J7	498 aa		12.47	□□□□□ -0.41
PGAP2-231	ENST00000528216	TRPC5	Q9UL62	973 aa	Predicted RBP	12.47	□□□□□ -0.41
PGAP2-231	ENST00000528216	MAP3K2	Q9Y2U5	619 aa		12.47	□□□□□ -0.41
PGAP2-231	ENST00000528216	BCL9L	Q86UU0	1499 aa		12.46	□□□□□ -0.41
PGAP2-231	ENST00000528216	SNRPA1	P09661	255 aa	Known RBP	12.46	□□□□□ -0.41
PGAP2-231	ENST00000528216	CHML	P26374	656 aa		12.46	□□□□□ -0.41
PGAP2-231	ENST00000528216	L1TD1	Q5T7N2	865 aa	Known RBP	12.46	□□□□□ -0.41
PGAP2-231	ENST00000528216	TTC5	Q8N0Z6	440 aa		12.46	□□□□□ -0.41
PGAP2-231	ENST00000528216	AK9	Q5TCS8	1911 aa		12.46	□□□□□ -0.41
PGAP2-231	ENST00000528216	SLIT2	O94813	1529 aa		12.46	□□□□□ -0.41
PGAP2-231	ENST00000528216	GRM8	O00222	908 aa		12.46	□□□□□ -0.42
PGAP2-231	ENST00000528216	GLRX3	O76003	335 aa	Known RBP	12.46	□□□□□ -0.42
PGAP2-231	ENST00000528216	FMNL2	Q96PY5	1086 aa		12.46	□□□□□ -0.42
PGAP2-231	ENST00000528216	C5	P01031	1676 aa		12.45	□□□□□ -0.42
PGAP2-231	ENST00000528216	COL14A1	Q05707	1796 aa	Known RBP	12.45	□□□□□ -0.42
PGAP2-231	ENST00000528216	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.45	□□□□□ -0.42
PGAP2-231	ENST00000528216	CNTROB	Q8N137	903 aa		12.45	□□□□□ -0.42
PGAP2-231	ENST00000528216	CLASRP	Q8N2M8	674 aa	Known RBP	12.45	□□□□□ -0.42
PGAP2-231	ENST00000528216	WDR17	Q8IZU2	1322 aa		12.44	□□□□□ -0.42
PGAP2-231	ENST00000528216	TRIM6-TRIM34	B2RNG4	842 aa		12.44	□□□□□ -0.42
PGAP2-231	ENST00000528216	GOLGA6L22	H0YM25	854 aa		12.44	□□□□□ -0.42
PGAP2-231	ENST00000528216	RXRB	P28702	533 aa		12.44	□□□□□ -0.42
PGAP2-231	ENST00000528216	VPS72	Q15906	364 aa		12.44	□□□□□ -0.42
PGAP2-231	ENST00000528216	TOM1L2	Q6ZVM7	507 aa		12.44	□□□□□ -0.42
PGAP2-231	ENST00000528216	PCDH11X	Q9BZA7	1347 aa		12.44	□□□□□ -0.42
PGAP2-231	ENST00000528216	PCDH11Y	Q9BZA8	1340 aa		12.44	□□□□□ -0.42
PGAP2-231	ENST00000528216	PDIA6	Q15084	440 aa		12.44	□□□□□ -0.42
PGAP2-231	ENST00000528216	RUFY2	Q8WXA3	655 aa		12.44	□□□□□ -0.42
PGAP2-231	ENST00000528216	GJD4	Q96KN9	370 aa	Predicted RBP	12.44	□□□□□ -0.42
PGAP2-231	ENST00000528216	ERVV-2	B6SEH9	535 aa		12.43	□□□□□ -0.42
PGAP2-231	ENST00000528216	METTL22	Q9BUU2	404 aa	Predicted RBP	12.43	□□□□□ -0.42
PGAP2-231	ENST00000528216	HIP1	O00291	1037 aa		12.42	□□□□□ -0.42
PGAP2-231	ENST00000528216	CABP4	P57796	275 aa		12.42	□□□□□ -0.42
PGAP2-231	ENST00000528216	RBM6	P78332	1123 aa	Known RBP	12.42	□□□□□ -0.42
PGAP2-231	ENST00000528216	OS9	Q13438	667 aa	Predicted RBP	12.42	□□□□□ -0.42
PGAP2-231	ENST00000528216	RIC3	Q7Z5B4	369 aa		12.42	□□□□□ -0.42
PGAP2-231	ENST00000528216	SPRYD3	Q8NCJ5	442 aa		12.42	□□□□□ -0.42
PGAP2-231	ENST00000528216	PI4K2B	Q8TCG2	481 aa		12.42	□□□□□ -0.42
PGAP2-231	ENST00000528216	NKX1-1	Q15270	411 aa	Predicted RBP	12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	NFATC2IP	Q8NCF5	419 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	TNPO1	Q92973	898 aa	Known RBP	12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	RILPL2	Q969X0	211 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	PLCH1	Q4KWH8	1693 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	UBR2	Q8IWV8	1755 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	PAPPA	Q13219	1627 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	COL5A2	P05997	1499 aa	Predicted RBP	12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	SPATA31A5	Q5VU36	1347 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	SPATA31A7	Q8IWB4	1347 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	ATRN	O75882	1429 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216		A0A0G2JS52	829 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	CYP27B1	O15528	508 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	TRAK2	O60296	914 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	CD2BP2	O95400	341 aa	Known RBP	12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	PROSER3	Q2NL68	480 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	TICAM2	Q86XR7	235 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	INTS4	Q96HW7	963 aa	Known RBP	12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	CARD10	Q9BWT7	1032 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	ECHDC1	Q9NTX5	307 aa		12.41	□□□□□ -0.42
PGAP2-231	ENST00000528216	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
PGAP2-231	ENST00000528216	ZCRB1	Q8TBF4	217 aa	Known RBP	12.4	□□□□□ -0.42
PGAP2-231	ENST00000528216	ZNF496	Q96IT1	587 aa	Predicted RBP	12.4	□□□□□ -0.42
PGAP2-231	ENST00000528216	RBM42	Q9BTD8	480 aa	Known RBP	12.4	□□□□□ -0.42
PGAP2-231	ENST00000528216	IL1RAPL2	Q9NP60	686 aa		12.4	□□□□□ -0.42
PGAP2-231	ENST00000528216	SPATA31A1	Q5TZJ5	1347 aa		12.4	□□□□□ -0.42
PGAP2-231	ENST00000528216	NEURL1B	A8MQ27	555 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	ANXA1	P04083	346 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	IFIT2	P09913	472 aa	Known RBP	12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	FAM98C	Q17RN3	349 aa	Known RBP	12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	ANKRD13D	Q6ZTN6	518 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	ANO2	Q9NQ90	1003 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	RAD50	Q92878	1312 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	SGSM2	O43147	1006 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	HSPA4	P34932	840 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	GCKR	Q14397	625 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	KIAA1211	Q6ZU35	1233 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	PLBD2	Q8NHP8	589 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	XAGE3	Q8WTP9	111 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	GLI3	P10071	1580 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	ARFGEF2	Q9Y6D5	1785 aa		12.39	□□□□□ -0.43
PGAP2-231	ENST00000528216	NWD2	Q9ULI1	1742 aa		12.38	□□□□□ -0.43
PGAP2-231	ENST00000528216	IGKV5-2	P06315	115 aa		12.38	□□□□□ -0.43
PGAP2-231	ENST00000528216	CUL4A	Q13619	759 aa		12.38	□□□□□ -0.43
PGAP2-231	ENST00000528216	LRP10	Q7Z4F1	713 aa		12.38	□□□□□ -0.43
PGAP2-231	ENST00000528216	NUTM1	Q86Y26	1132 aa		12.38	□□□□□ -0.43
PGAP2-231	ENST00000528216	EVI5L	Q96CN4	794 aa		12.38	□□□□□ -0.43
PGAP2-231	ENST00000528216	SUCLG2	Q96I99	432 aa		12.38	□□□□□ -0.43
PGAP2-231	ENST00000528216	BCL11A	Q9H165	835 aa		12.38	□□□□□ -0.43
PGAP2-231	ENST00000528216	AFDN	P55196	1824 aa	Known RBP	12.38	□□□□□ -0.43
PGAP2-231	ENST00000528216	RFX7	Q2KHR2	1363 aa		12.37	□□□□□ -0.43
PGAP2-231	ENST00000528216	CYP2E1	P05181	493 aa	Predicted RBP	12.37	□□□□□ -0.43
PGAP2-231	ENST00000528216	IL2RB	P14784	551 aa		12.37	□□□□□ -0.43
PGAP2-231	ENST00000528216	CWF19L2	Q2TBE0	894 aa	Known RBP	12.37	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms