RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 SRGNP10124 158 aa14.71□□□□□ -0.05
CTSB-212ENST00000526645 DEFB115Q30KQ5 88 aa14.71□□□□□ -0.05
CTSB-212ENST00000526645 CCDC93Q567U6 631 aa14.71□□□□□ -0.05
CTSB-212ENST00000526645 EAPPQ56P03 285 aaPredicted RBP14.71□□□□□ -0.05
CTSB-212ENST00000526645 IL6STP40189 918 aaPredicted RBP14.7□□□□□ -0.06
CTSB-212ENST00000526645 MLLT1Q03111 559 aaPredicted RBP14.7□□□□□ -0.06
CTSB-212ENST00000526645 NPM2Q86SE8 214 aaKnown RBP14.7□□□□□ -0.06
CTSB-212ENST00000526645 SETDB2Q96T68 719 aa14.7□□□□□ -0.06
CTSB-212ENST00000526645 POLR3GLQ9BT43 218 aa14.7□□□□□ -0.06
CTSB-212ENST00000526645 WDR33Q9C0J8 1336 aaKnown RBP14.69□□□□□ -0.06
CTSB-212ENST00000526645 EPHX2P34913 555 aa14.69□□□□□ -0.06
CTSB-212ENST00000526645 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
CTSB-212ENST00000526645 HEG1Q9ULI3 1381 aa14.69□□□□□ -0.06
CTSB-212ENST00000526645 RGS19P49795 217 aa14.68□□□□□ -0.06
CTSB-212ENST00000526645 FKBP4Q02790 459 aaKnown RBP eCLIP14.68□□□□□ -0.06
CTSB-212ENST00000526645 PANK3Q9H999 370 aa14.68□□□□□ -0.06
CTSB-212ENST00000526645 ZNF541Q9H0D2 1346 aa14.67□□□□□ -0.06
CTSB-212ENST00000526645 CNTROBQ8N137 903 aa14.67□□□□□ -0.06
CTSB-212ENST00000526645 CCDC24Q8N4L8 307 aa14.67□□□□□ -0.06
CTSB-212ENST00000526645 C7orf43Q8WVR3 580 aa14.67□□□□□ -0.06
CTSB-212ENST00000526645 BEGAINQ9BUH8 593 aa14.67□□□□□ -0.06
CTSB-212ENST00000526645 ABT1Q9ULW3 272 aaKnown RBP14.67□□□□□ -0.06
CTSB-212ENST00000526645 TIMELESSQ9UNS1 1208 aa14.67□□□□□ -0.06
CTSB-212ENST00000526645 TBC1D2BQ9UPU7 963 aa14.67□□□□□ -0.06
CTSB-212ENST00000526645 ZNF330Q9Y3S2 320 aaPredicted RBP14.67□□□□□ -0.06
CTSB-212ENST00000526645 SIPA1L3O60292 1781 aaPredicted RBP14.66□□□□□ -0.06
CTSB-212ENST00000526645 NPR1P16066 1061 aa14.66□□□□□ -0.06
CTSB-212ENST00000526645 ECE1P42892 770 aa14.66□□□□□ -0.06
CTSB-212ENST00000526645 RTKN2Q8IZC4 609 aa14.66□□□□□ -0.06
CTSB-212ENST00000526645 CAMTA2O94983 1202 aa14.65□□□□□ -0.06
CTSB-212ENST00000526645 MTHFSDQ2M296 383 aaKnown RBP14.65□□□□□ -0.06
CTSB-212ENST00000526645 MAP1SQ66K74 1059 aaPredicted RBP14.65□□□□□ -0.06
CTSB-212ENST00000526645 ZNF790Q6PG37 636 aa14.65□□□□□ -0.06
CTSB-212ENST00000526645 GPC2Q8N158 579 aa14.65□□□□□ -0.06
CTSB-212ENST00000526645 ZNF496Q96IT1 587 aaPredicted RBP14.65□□□□□ -0.06
CTSB-212ENST00000526645 RNF123Q5XPI4 1314 aa14.65□□□□□ -0.06
CTSB-212ENST00000526645 CCDC85CA6NKD9 419 aa14.64□□□□□ -0.07
CTSB-212ENST00000526645 FZD9O00144 591 aa14.64□□□□□ -0.07
CTSB-212ENST00000526645 TEFQ10587 303 aa14.64□□□□□ -0.07
CTSB-212ENST00000526645 DDX21Q9NR30 783 aaKnown RBP eCLIP14.64□□□□□ -0.07
CTSB-212ENST00000526645 ZNF652Q9Y2D9 606 aa14.64□□□□□ -0.07
CTSB-212ENST00000526645 KLRG2A4D1S0 409 aaPredicted RBP14.63□□□□□ -0.07
CTSB-212ENST00000526645 RGL2O15211 777 aa14.63□□□□□ -0.07
CTSB-212ENST00000526645 HMOX1P09601 288 aa14.63□□□□□ -0.07
CTSB-212ENST00000526645 IARSP41252 1262 aaKnown RBP14.63□□□□□ -0.07
CTSB-212ENST00000526645 CLEC4GQ6UXB4 293 aa14.63□□□□□ -0.07
CTSB-212ENST00000526645 NBPF5PQ86XG9 351 aaPredicted RBP14.63□□□□□ -0.07
CTSB-212ENST00000526645 FMNL2Q96PY5 1086 aa14.63□□□□□ -0.07
CTSB-212ENST00000526645 ZNF277Q9NRM2 450 aaPredicted RBP14.63□□□□□ -0.07
CTSB-212ENST00000526645 KNSTRNQ9Y448 316 aa14.63□□□□□ -0.07
CTSB-212ENST00000526645 LTBP1Q14766 1721 aa14.62□□□□□ -0.07
CTSB-212ENST00000526645 DZIP3Q86Y13 1208 aaKnown RBP14.62□□□□□ -0.07
CTSB-212ENST00000526645 CAPNS2Q96L46 248 aa14.62□□□□□ -0.07
CTSB-212ENST00000526645 CA12O43570 354 aa14.61□□□□□ -0.07
CTSB-212ENST00000526645 LMOD1P29536 600 aaPredicted RBP14.61□□□□□ -0.07
CTSB-212ENST00000526645 JDP2Q8WYK2 163 aa14.61□□□□□ -0.07
CTSB-212ENST00000526645 TRPM7Q96QT4 1865 aa14.61□□□□□ -0.07
CTSB-212ENST00000526645 ALDH1B1P30837 517 aa14.6□□□□□ -0.07
CTSB-212ENST00000526645 MAP2K2P36507 400 aa14.6□□□□□ -0.07
CTSB-212ENST00000526645 PAXIP1Q6ZW49 1069 aaPredicted RBP14.6□□□□□ -0.07
CTSB-212ENST00000526645 GPR101Q96P66 508 aaPredicted RBP14.6□□□□□ -0.07
CTSB-212ENST00000526645 PSMD1Q99460 953 aa14.6□□□□□ -0.07
CTSB-212ENST00000526645 SNED1Q8TER0 1413 aa14.59□□□□□ -0.07
CTSB-212ENST00000526645 GNAT3A8MTJ3 354 aa14.59□□□□□ -0.07
CTSB-212ENST00000526645 DIAPH1O60610 1272 aaKnown RBP14.59□□□□□ -0.07
CTSB-212ENST00000526645 A1BGP04217 495 aa14.59□□□□□ -0.07
CTSB-212ENST00000526645 EIF6P56537 245 aaKnown RBP14.59□□□□□ -0.07
CTSB-212ENST00000526645 EIF4G2P78344 907 aaKnown RBP eCLIP14.59□□□□□ -0.07
CTSB-212ENST00000526645 CC2D2BQ6DHV5 1058 aa14.59□□□□□ -0.07
CTSB-212ENST00000526645 TPTE2Q6XPS3 522 aa14.59□□□□□ -0.07
CTSB-212ENST00000526645 GAS2L2Q8NHY3 880 aa14.59□□□□□ -0.07
CTSB-212ENST00000526645 GRIPAP1Q4V328 841 aa14.58□□□□□ -0.08
CTSB-212ENST00000526645 USP50Q70EL3 339 aaPredicted RBP14.58□□□□□ -0.08
CTSB-212ENST00000526645 SYNE4Q8N205 404 aa14.58□□□□□ -0.08
CTSB-212ENST00000526645 TLL2Q9Y6L7 1015 aa14.58□□□□□ -0.08
CTSB-212ENST00000526645 CEMIPQ8WUJ3 1361 aa14.58□□□□□ -0.08
CTSB-212ENST00000526645 CYP4F22Q6NT55 531 aa14.57□□□□□ -0.08
CTSB-212ENST00000526645 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
CTSB-212ENST00000526645 IL17REQ8NFR9 667 aa14.56□□□□□ -0.08
CTSB-212ENST00000526645 HHIPL1Q96JK4 782 aa14.56□□□□□ -0.08
CTSB-212ENST00000526645 SCNN1DP51172 638 aa14.55□□□□□ -0.08
CTSB-212ENST00000526645 GRM1Q13255 1194 aa14.55□□□□□ -0.08
CTSB-212ENST00000526645 OLFM4Q6UX06 510 aa14.55□□□□□ -0.08
CTSB-212ENST00000526645 MCOLN1Q9GZU1 580 aa14.55□□□□□ -0.08
CTSB-212ENST00000526645 NIP7Q9Y221 180 aaKnown RBP eCLIP14.55□□□□□ -0.083e-7■■■■□ 21.9
CTSB-212ENST00000526645 GJA3Q9Y6H8 435 aa14.55□□□□□ -0.08
CTSB-212ENST00000526645 RIC1Q4ADV7 1423 aa14.55□□□□□ -0.08
CTSB-212ENST00000526645 BTBD11A6QL63 1104 aa14.54□□□□□ -0.08
CTSB-212ENST00000526645 BRPF1P55201 1214 aaPredicted RBP14.54□□□□□ -0.08
CTSB-212ENST00000526645 CRY2Q49AN0 593 aa14.54□□□□□ -0.08
CTSB-212ENST00000526645 CFAP44Q96MT7 982 aa14.54□□□□□ -0.08
CTSB-212ENST00000526645 COL4A5P29400 1685 aa14.54□□□□□ -0.08
CTSB-212ENST00000526645 COL3A1P02461 1466 aaPredicted RBP14.53□□□□□ -0.08
CTSB-212ENST00000526645 HSPA5P11021 654 aaKnown RBP14.53□□□□□ -0.08
CTSB-212ENST00000526645 GTF2E1P29083 439 aaPredicted RBP14.53□□□□□ -0.08
CTSB-212ENST00000526645 CST9Q5W186 159 aa14.53□□□□□ -0.08
CTSB-212ENST00000526645 CLSPNQ9HAW4 1339 aa14.52□□□□□ -0.08
CTSB-212ENST00000526645 SNRPA1P09661 255 aaKnown RBP14.52□□□□□ -0.09
CTSB-212ENST00000526645 EPS15P42566 896 aa14.52□□□□□ -0.09
CTSB-212ENST00000526645 SAPCD2Q86UD0 394 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms