RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 HDGFL1Q5TGJ6 251 aa4.11□□□□□ -1.75
CD44-212ENST00000524922 CD163Q86VB7 1156 aa4.11□□□□□ -1.75
CD44-212ENST00000524922 TPCN2Q8NHX9 752 aa4.11□□□□□ -1.75
CD44-212ENST00000524922 TSPAN10Q9H1Z9 355 aaPredicted RBP4.11□□□□□ -1.75
CD44-212ENST00000524922 STARD13Q9Y3M8 1113 aa4.11□□□□□ -1.75
CD44-212ENST00000524922 GPC6Q9Y625 555 aaPredicted RBP4.11□□□□□ -1.75
CD44-212ENST00000524922 ADARB2-AS1A8MUL3 147 aa4.1□□□□□ -1.75
CD44-212ENST00000524922 C1QTNF9BB2RNN3 333 aa4.1□□□□□ -1.75
CD44-212ENST00000524922 BAG6P46379 1132 aa4.1□□□□□ -1.75
CD44-212ENST00000524922 KCNQ4P56696 695 aa4.1□□□□□ -1.75
CD44-212ENST00000524922 FLIIQ13045 1269 aa4.1□□□□□ -1.75
CD44-212ENST00000524922 C1orf53Q5VUE5 145 aa4.1□□□□□ -1.75
CD44-212ENST00000524922 CCDC102BQ68D86 513 aa4.1□□□□□ -1.75
CD44-212ENST00000524922 LARGE2Q8N3Y3 721 aa4.1□□□□□ -1.75
CD44-212ENST00000524922 SLC30A3Q99726 388 aa4.1□□□□□ -1.75
CD44-212ENST00000524922 MARK1Q9P0L2 795 aa4.1□□□□□ -1.75
CD44-212ENST00000524922 SIN3BO75182 1162 aa4.09□□□□□ -1.75
CD44-212ENST00000524922 GRNP28799 593 aaKnown RBP4.09□□□□□ -1.75
CD44-212ENST00000524922 LRRC69Q6ZNQ3 347 aa4.09□□□□□ -1.75
CD44-212ENST00000524922 ILDR2Q71H61 639 aa4.09□□□□□ -1.75
CD44-212ENST00000524922 TRIM50Q86XT4 487 aa4.09□□□□□ -1.75
CD44-212ENST00000524922 OGFOD1Q8N543 542 aa4.09□□□□□ -1.75
CD44-212ENST00000524922 TSEN2Q8NCE0 465 aaKnown RBP4.09□□□□□ -1.75
CD44-212ENST00000524922 ZNF280CQ8ND82 737 aa4.09□□□□□ -1.75
CD44-212ENST00000524922 CLUAP1Q96AJ1 413 aa4.09□□□□□ -1.75
CD44-212ENST00000524922 RRAGCQ9HB90 399 aa4.09□□□□□ -1.75
CD44-212ENST00000524922 MAFBQ9Y5Q3 323 aaPredicted RBP4.09□□□□□ -1.75
CD44-212ENST00000524922 ELOA3CA0A087WX78 387 aaPredicted RBP4.08□□□□□ -1.76
CD44-212ENST00000524922 SERTM1A2A2V5 107 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 PALM3A6NDB9 673 aaPredicted RBP4.08□□□□□ -1.76
CD44-212ENST00000524922 ELOA3DA6NLF2 546 aaPredicted RBP4.08□□□□□ -1.76
CD44-212ENST00000524922 SFI1A8K8P3 1242 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 UBTFP17480 764 aaKnown RBP4.08□□□□□ -1.76
CD44-212ENST00000524922 AMPD1P23109 780 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 PSMA6P60900 246 aaKnown RBP4.08□□□□□ -1.76
CD44-212ENST00000524922 PSME1Q06323 249 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 TYRO3Q06418 890 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 ELOA3BQ3SY89 546 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 XP32Q5T750 250 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 KANK4Q5T7N3 995 aaPredicted RBP4.08□□□□□ -1.76
CD44-212ENST00000524922 C20orf204Q6ZNR8 217 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 SYT9Q86SS6 491 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 STAG2Q8N3U4 1231 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 ELOA3Q8NG57 546 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 TNFRSF25Q93038 417 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 HSH2DQ96JZ2 352 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 C2orf49Q9BVC5 232 aaPredicted RBP4.08□□□□□ -1.76
CD44-212ENST00000524922 PRDM6Q9NQX0 595 aa4.08□□□□□ -1.76
CD44-212ENST00000524922 MKRN1Q9UHC7 482 aaKnown RBP4.08□□□□□ -1.76
CD44-212ENST00000524922 RAD21O60216 631 aa4.07□□□□□ -1.76
CD44-212ENST00000524922 FURINP09958 794 aa4.07□□□□□ -1.76
CD44-212ENST00000524922 ATP1A2P50993 1020 aa4.07□□□□□ -1.76
CD44-212ENST00000524922 BICDL1Q6ZP65 573 aa4.07□□□□□ -1.76
CD44-212ENST00000524922 GLMNQ92990 594 aa4.07□□□□□ -1.76
CD44-212ENST00000524922 PHACTR1Q9C0D0 580 aa4.07□□□□□ -1.76
CD44-212ENST00000524922 DMGDHQ9UI17 866 aaKnown RBP4.07□□□□□ -1.76
CD44-212ENST00000524922 BCS1LQ9Y276 419 aa4.07□□□□□ -1.76
CD44-212ENST00000524922 K7ELQ4 463 aaPredicted RBP4.06□□□□□ -1.76
CD44-212ENST00000524922 ALBP02768 609 aa4.06□□□□□ -1.76
CD44-212ENST00000524922 NID1P14543 1247 aa4.06□□□□□ -1.76
CD44-212ENST00000524922 SPEM2Q0P670 501 aa4.06□□□□□ -1.76
CD44-212ENST00000524922 PTK7Q13308 1070 aa4.06□□□□□ -1.76
CD44-212ENST00000524922 CRTC2Q53ET0 693 aaPredicted RBP4.06□□□□□ -1.76
CD44-212ENST00000524922 C8orf86Q6ZUL3 223 aa4.06□□□□□ -1.76
CD44-212ENST00000524922 ZNF594Q96JF6 807 aaPredicted RBP4.06□□□□□ -1.76
CD44-212ENST00000524922 SUSD3Q96L08 255 aa4.06□□□□□ -1.76
CD44-212ENST00000524922 ARXQ96QS3 562 aa4.06□□□□□ -1.76
CD44-212ENST00000524922 PLVAPQ9BX97 442 aa4.06□□□□□ -1.76
CD44-212ENST00000524922 NOP53Q9NZM5 478 aaKnown RBP4.06□□□□□ -1.76
CD44-212ENST00000524922 TFIP11Q9UBB9 837 aaKnown RBP4.06□□□□□ -1.76
CD44-212ENST00000524922 ZNF232Q9UNY5 417 aa4.06□□□□□ -1.76
CD44-212ENST00000524922 HCN4Q9Y3Q4 1203 aa4.06□□□□□ -1.76
CD44-212ENST00000524922 RAB44Q7Z6P3 723 aaPredicted RBP4.05□□□□□ -1.76
CD44-212ENST00000524922 PROSER2Q86WR7 435 aaPredicted RBP4.05□□□□□ -1.76
CD44-212ENST00000524922 ALDH16A1Q8IZ83 802 aa4.05□□□□□ -1.76
CD44-212ENST00000524922 MICALL1Q8N3F8 863 aa4.05□□□□□ -1.76
CD44-212ENST00000524922 RHPN1Q8TCX5 695 aa4.05□□□□□ -1.76
CD44-212ENST00000524922 BRD7Q9NPI1 651 aa4.05□□□□□ -1.76
CD44-212ENST00000524922 PRR12Q9ULL5 1215 aa4.05□□□□□ -1.76
CD44-212ENST00000524922 ATAD2Q6PL18 1390 aa4.04□□□□□ -1.76
CD44-212ENST00000524922 A6NJR5 290 aa4.04□□□□□ -1.76
CD44-212ENST00000524922 SPATA31C1P0DKV0 1188 aa4.04□□□□□ -1.76
CD44-212ENST00000524922 BTLAQ7Z6A9 289 aa4.04□□□□□ -1.76
CD44-212ENST00000524922 WWC1Q8IX03 1113 aa4.04□□□□□ -1.76
CD44-212ENST00000524922 GAS2L2Q8NHY3 880 aa4.04□□□□□ -1.76
CD44-212ENST00000524922 PPP1R12CQ9BZL4 782 aa4.04□□□□□ -1.76
CD44-212ENST00000524922 GJA3Q9Y6H8 435 aa4.04□□□□□ -1.76
CD44-212ENST00000524922 M0R082 166 aa4.03□□□□□ -1.76
CD44-212ENST00000524922 PIK3R2O00459 728 aa4.03□□□□□ -1.76
CD44-212ENST00000524922 PPP1R12BO60237 982 aaPredicted RBP4.03□□□□□ -1.76
CD44-212ENST00000524922 ADH7P40394 386 aa4.03□□□□□ -1.76
CD44-212ENST00000524922 SEC13P55735 322 aa4.03□□□□□ -1.76
CD44-212ENST00000524922 TMEM132AQ24JP5 1023 aa4.03□□□□□ -1.76
CD44-212ENST00000524922 RSPO4Q2I0M5 234 aaPredicted RBP4.03□□□□□ -1.76
CD44-212ENST00000524922 FOXD4L6Q3SYB3 417 aaPredicted RBP4.03□□□□□ -1.76
CD44-212ENST00000524922 NKAPLQ5M9Q1 402 aa4.03□□□□□ -1.76
CD44-212ENST00000524922 IER5Q5VY09 327 aa4.03□□□□□ -1.76
CD44-212ENST00000524922 FOXD4L3Q6VB84 417 aaPredicted RBP4.03□□□□□ -1.76
CD44-212ENST00000524922 ZNF417Q8TAU3 575 aa4.03□□□□□ -1.76
CD44-212ENST00000524922 ZNF587Q96SQ5 575 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms