RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 RGPD1P0DJD0 1748 aa14.36□□□□□ -0.11
PTPRK-216ENST00000524481 ERC2O15083 957 aa14.36□□□□□ -0.11
PTPRK-216ENST00000524481 PIGBQ92521 554 aa14.36□□□□□ -0.11
PTPRK-216ENST00000524481 EDC3Q96F86 508 aaKnown RBP14.36□□□□□ -0.11
PTPRK-216ENST00000524481 ZNF594Q96JF6 807 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-216ENST00000524481 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-216ENST00000524481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.36□□□□□ -0.111e-9■■□□□ 13.8
PTPRK-216ENST00000524481 REC8O95072 547 aa14.35□□□□□ -0.11
PTPRK-216ENST00000524481 SYNE4Q8N205 404 aa14.35□□□□□ -0.11
PTPRK-216ENST00000524481 FAM89AQ96GI7 184 aa14.35□□□□□ -0.11
PTPRK-216ENST00000524481 DNAJC2Q99543 621 aaKnown RBP14.35□□□□□ -0.11
PTPRK-216ENST00000524481 TAF7LQ5H9L4 462 aa14.35□□□□□ -0.11
PTPRK-216ENST00000524481 KIAA1211Q6ZU35 1233 aa14.35□□□□□ -0.11
PTPRK-216ENST00000524481 METTL22Q9BUU2 404 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-216ENST00000524481 TAOK2Q9UL54 1235 aa14.35□□□□□ -0.11
PTPRK-216ENST00000524481 SMIM5Q71RC9 77 aa14.34□□□□□ -0.11
PTPRK-216ENST00000524481 DIAPH3Q9NSV4 1193 aa14.34□□□□□ -0.11
PTPRK-216ENST00000524481 STRCP1A6NGW2 1772 aa14.34□□□□□ -0.11
PTPRK-216ENST00000524481 TLR7Q9NYK1 1049 aaKnown RBP14.34□□□□□ -0.11
PTPRK-216ENST00000524481 ALDH1L1O75891 902 aa14.34□□□□□ -0.11
PTPRK-216ENST00000524481 USP26Q9BXU7 913 aa14.33□□□□□ -0.12
PTPRK-216ENST00000524481 HSP90AB4PQ58FF6 505 aa14.33□□□□□ -0.12
PTPRK-216ENST00000524481 IBTKQ9P2D0 1353 aaPredicted RBP14.33□□□□□ -0.12
PTPRK-216ENST00000524481 FAM98CQ17RN3 349 aaKnown RBP14.32□□□□□ -0.12
PTPRK-216ENST00000524481 EAF2Q96CJ1 260 aaPredicted RBP14.32□□□□□ -0.12
PTPRK-216ENST00000524481 KAZALD1Q96I82 304 aa14.32□□□□□ -0.12
PTPRK-216ENST00000524481 CAMTA1Q9Y6Y1 1673 aa14.32□□□□□ -0.12
PTPRK-216ENST00000524481 DDB1Q16531 1140 aa14.32□□□□□ -0.12
PTPRK-216ENST00000524481 TIMM10P62072 90 aa14.32□□□□□ -0.12
PTPRK-216ENST00000524481 HDAC5Q9UQL6 1122 aa14.32□□□□□ -0.12
PTPRK-216ENST00000524481 RAB11FIP3O75154 756 aa14.31□□□□□ -0.12
PTPRK-216ENST00000524481 GORABQ5T7V8 394 aa14.31□□□□□ -0.12
PTPRK-216ENST00000524481 IL25Q9H293 177 aa14.31□□□□□ -0.12
PTPRK-216ENST00000524481 NCLP19338 710 aaKnown RBP14.31□□□□□ -0.12
PTPRK-216ENST00000524481 CHMLP26374 656 aa14.31□□□□□ -0.12
PTPRK-216ENST00000524481 TFCP2Q12800 502 aa14.31□□□□□ -0.12
PTPRK-216ENST00000524481 CNTROBQ8N137 903 aa14.31□□□□□ -0.12
PTPRK-216ENST00000524481 GPATCH3Q96I76 525 aa14.31□□□□□ -0.12
PTPRK-216ENST00000524481 CPA1P15085 419 aa14.3□□□□□ -0.12
PTPRK-216ENST00000524481 FSD1Q9BTV5 496 aa14.3□□□□□ -0.12
PTPRK-216ENST00000524481 MARF1Q9Y4F3 1742 aaKnown RBP14.3□□□□□ -0.12
PTPRK-216ENST00000524481 GOLGB1Q14789 3259 aaKnown RBP14.3□□□□□ -0.12
PTPRK-216ENST00000524481 SASH1O94885 1247 aa14.3□□□□□ -0.12
PTPRK-216ENST00000524481 STARD3NLO95772 234 aa14.3□□□□□ -0.12
PTPRK-216ENST00000524481 BICDL1Q6ZP65 573 aa14.3□□□□□ -0.12
PTPRK-216ENST00000524481 ESYT1Q9BSJ8 1104 aa14.3□□□□□ -0.12
PTPRK-216ENST00000524481 PALD1Q9ULE6 856 aa14.3□□□□□ -0.12
PTPRK-216ENST00000524481 ERVV-2B6SEH9 535 aa14.3□□□□□ -0.12
PTPRK-216ENST00000524481 RBM25P49756 843 aaKnown RBP14.3□□□□□ -0.12
PTPRK-216ENST00000524481 KIF6Q6ZMV9 814 aa14.3□□□□□ -0.12
PTPRK-216ENST00000524481 CWC25Q9NXE8 425 aaPredicted RBP14.3□□□□□ -0.12
PTPRK-216ENST00000524481 DCCP43146 1447 aa14.29□□□□□ -0.12
PTPRK-216ENST00000524481 CHGBP05060 677 aa14.29□□□□□ -0.12
PTPRK-216ENST00000524481 MCCP23508 829 aa14.29□□□□□ -0.12
PTPRK-216ENST00000524481 PLBD2Q8NHP8 589 aa14.29□□□□□ -0.12
PTPRK-216ENST00000524481 KIF2CQ99661 725 aa14.29□□□□□ -0.12
PTPRK-216ENST00000524481 SNRKQ9NRH2 765 aa14.29□□□□□ -0.12
PTPRK-216ENST00000524481 ECHDC1Q9NTX5 307 aa14.29□□□□□ -0.12
PTPRK-216ENST00000524481 TOM1O60784 492 aa14.29□□□□□ -0.12
PTPRK-216ENST00000524481 SLIT3O75094 1523 aa14.29□□□□□ -0.12
PTPRK-216ENST00000524481 K7ELQ4 463 aaPredicted RBP14.28□□□□□ -0.12
PTPRK-216ENST00000524481 KCNQ2O43526 872 aa14.28□□□□□ -0.12
PTPRK-216ENST00000524481 ST18O60284 1047 aa14.28□□□□□ -0.12
PTPRK-216ENST00000524481 POLA2Q14181 598 aa14.28□□□□□ -0.12
PTPRK-216ENST00000524481 ATG3Q9NT62 314 aa14.28□□□□□ -0.12
PTPRK-216ENST00000524481 HEG1Q9ULI3 1381 aa14.28□□□□□ -0.12
PTPRK-216ENST00000524481 ATP6V1AP38606 617 aa14.28□□□□□ -0.12
PTPRK-216ENST00000524481 CHMP5Q9NZZ3 219 aa14.28□□□□□ -0.12
PTPRK-216ENST00000524481 ZBTB1Q9Y2K1 713 aa14.28□□□□□ -0.12
PTPRK-216ENST00000524481 HLFQ16534 295 aa14.27□□□□□ -0.12
PTPRK-216ENST00000524481 SLFNL1Q499Z3 407 aa14.27□□□□□ -0.12
PTPRK-216ENST00000524481 DDX46Q7L014 1031 aaKnown RBP14.27□□□□□ -0.12
PTPRK-216ENST00000524481 TCEANC2Q96MN5 208 aa14.27□□□□□ -0.12
PTPRK-216ENST00000524481 GLRX3O76003 335 aaKnown RBP14.27□□□□□ -0.13
PTPRK-216ENST00000524481 CHAMP1Q96JM3 812 aa14.27□□□□□ -0.13
PTPRK-216ENST00000524481 FAM227BQ96M60 508 aa14.27□□□□□ -0.13
PTPRK-216ENST00000524481 PUS3Q9BZE2 481 aaKnown RBP14.27□□□□□ -0.13
PTPRK-216ENST00000524481 CPDO75976 1380 aa14.27□□□□□ -0.13
PTPRK-216ENST00000524481 FKBP4Q02790 459 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTPRK-216ENST00000524481 CCDC57Q2TAC2 916 aa14.26□□□□□ -0.13
PTPRK-216ENST00000524481 ZGPATQ8N5A5 531 aaKnown RBP14.26□□□□□ -0.13
PTPRK-216ENST00000524481 LRRC24Q50LG9 513 aa14.26□□□□□ -0.13
PTPRK-216ENST00000524481 MEX3CQ5U5Q3 659 aaKnown RBP14.26□□□□□ -0.13
PTPRK-216ENST00000524481 CCDC24Q8N4L8 307 aa14.26□□□□□ -0.13
PTPRK-216ENST00000524481 DBNDD2Q9BQY9 259 aa14.26□□□□□ -0.13
PTPRK-216ENST00000524481 TRMT112Q9UI30 125 aaKnown RBP14.26□□□□□ -0.13
PTPRK-216ENST00000524481 NAP1L2Q9ULW6 460 aaPredicted RBP14.26□□□□□ -0.13
PTPRK-216ENST00000524481 NPHP1O15259 732 aa14.26□□□□□ -0.13
PTPRK-216ENST00000524481 ERC1Q8IUD2 1116 aa14.26□□□□□ -0.13
PTPRK-216ENST00000524481 HELBQ8NG08 1087 aaPredicted RBP14.26□□□□□ -0.13
PTPRK-216ENST00000524481 NCAPD2Q15021 1401 aa14.25□□□□□ -0.13
PTPRK-216ENST00000524481 COL5A2P05997 1499 aaPredicted RBP14.25□□□□□ -0.13
PTPRK-216ENST00000524481 RABEP1Q15276 862 aa14.25□□□□□ -0.13
PTPRK-216ENST00000524481 PRPF40BQ6NWY9 871 aaKnown RBP14.25□□□□□ -0.13
PTPRK-216ENST00000524481 PI4K2BQ8TCG2 481 aa14.25□□□□□ -0.13
PTPRK-216ENST00000524481 GTF2E1P29083 439 aaPredicted RBP14.24□□□□□ -0.13
PTPRK-216ENST00000524481 NCOA3Q9Y6Q9 1424 aa14.24□□□□□ -0.13
PTPRK-216ENST00000524481 SSFA2P28290 1259 aa14.24□□□□□ -0.13
PTPRK-216ENST00000524481 AEBP2Q6ZN18 517 aaPredicted RBP14.24□□□□□ -0.13
PTPRK-216ENST00000524481 HCLS1P14317 486 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms