RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 PLCD3Q8N3E9 789 aa12.71□□□□□ -0.37
ERGIC1-211ENST00000523215 SPRYD3Q8NCJ5 442 aa12.71□□□□□ -0.37
ERGIC1-211ENST00000523215 ESYT1Q9BSJ8 1104 aa12.71□□□□□ -0.37
ERGIC1-211ENST00000523215 DCCP43146 1447 aa12.71□□□□□ -0.37
ERGIC1-211ENST00000523215 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.38
ERGIC1-211ENST00000523215 OTUD7AQ8TE49 926 aaPredicted RBP12.71□□□□□ -0.38
ERGIC1-211ENST00000523215 PTMAP06454 111 aaKnown RBP12.7□□□□□ -0.38
ERGIC1-211ENST00000523215 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
ERGIC1-211ENST00000523215 C16orf71Q8IYS4 520 aaPredicted RBP12.7□□□□□ -0.38
ERGIC1-211ENST00000523215 PXDNQ92626 1479 aa12.7□□□□□ -0.38
ERGIC1-211ENST00000523215 MED23Q9ULK4 1368 aa12.7□□□□□ -0.38
ERGIC1-211ENST00000523215 KCPQ6ZWJ8 1503 aa12.7□□□□□ -0.38
ERGIC1-211ENST00000523215 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
ERGIC1-211ENST00000523215 RAD50Q92878 1312 aa12.7□□□□□ -0.38
ERGIC1-211ENST00000523215 ERC2O15083 957 aa12.69□□□□□ -0.38
ERGIC1-211ENST00000523215 FBXL16Q8N461 479 aa12.69□□□□□ -0.38
ERGIC1-211ENST00000523215 ADCY9O60503 1353 aa12.69□□□□□ -0.38
ERGIC1-211ENST00000523215 SLC26A8Q96RN1 970 aa12.69□□□□□ -0.38
ERGIC1-211ENST00000523215 ELP1O95163 1332 aa12.69□□□□□ -0.38
ERGIC1-211ENST00000523215 NUTM2FA1L443 756 aa12.68□□□□□ -0.38
ERGIC1-211ENST00000523215 CHMLP26374 656 aa12.68□□□□□ -0.38
ERGIC1-211ENST00000523215 G2E3Q7L622 706 aa12.68□□□□□ -0.38
ERGIC1-211ENST00000523215 MYH3P11055 1940 aa12.68□□□□□ -0.38
ERGIC1-211ENST00000523215 RAB11FIP3O75154 756 aa12.68□□□□□ -0.38
ERGIC1-211ENST00000523215 GIGYF1O75420 1035 aaPredicted RBP12.68□□□□□ -0.38
ERGIC1-211ENST00000523215 HSP90AA2PQ14568 343 aaPredicted RBP12.68□□□□□ -0.38
ERGIC1-211ENST00000523215 MEIS3Q99687 375 aa12.68□□□□□ -0.38
ERGIC1-211ENST00000523215 PHLPP1O60346 1717 aa12.68□□□□□ -0.38
ERGIC1-211ENST00000523215 REC8O95072 547 aa12.68□□□□□ -0.38
ERGIC1-211ENST00000523215 AMOTL2Q9Y2J4 779 aa12.68□□□□□ -0.38
ERGIC1-211ENST00000523215 MBD3O95983 291 aa12.67□□□□□ -0.38
ERGIC1-211ENST00000523215 ZKSCAN5Q9Y2L8 839 aa12.67□□□□□ -0.38
ERGIC1-211ENST00000523215 TTC41PQ6P2S7 1318 aa12.67□□□□□ -0.38
ERGIC1-211ENST00000523215 EYA1Q99502 592 aa12.67□□□□□ -0.38
ERGIC1-211ENST00000523215 LSG1Q9H089 658 aaKnown RBP12.67□□□□□ -0.38
ERGIC1-211ENST00000523215 RBSNQ9H1K0 784 aa12.67□□□□□ -0.38
ERGIC1-211ENST00000523215 MIS18AQ9NYP9 233 aa12.67□□□□□ -0.38
ERGIC1-211ENST00000523215 CHD4Q14839 1912 aa12.66□□□□□ -0.38
ERGIC1-211ENST00000523215 AKAP11Q9UKA4 1901 aa12.66□□□□□ -0.38
ERGIC1-211ENST00000523215 CLGNO14967 610 aa12.66□□□□□ -0.38
ERGIC1-211ENST00000523215 PHF14O94880 888 aa12.66□□□□□ -0.38
ERGIC1-211ENST00000523215 HDGFP51858 240 aaKnown RBP12.66□□□□□ -0.38
ERGIC1-211ENST00000523215 PDCL3Q9H2J4 239 aa12.66□□□□□ -0.38
ERGIC1-211ENST00000523215 TMEM63CQ9P1W3 806 aa12.66□□□□□ -0.38
ERGIC1-211ENST00000523215 FAM53CQ9NYF3 392 aa12.66□□□□□ -0.38
ERGIC1-211ENST00000523215 SYCP1Q15431 976 aa12.66□□□□□ -0.38
ERGIC1-211ENST00000523215 LRP10Q7Z4F1 713 aa12.65□□□□□ -0.38
ERGIC1-211ENST00000523215 USP25Q9UHP3 1055 aa12.65□□□□□ -0.38
ERGIC1-211ENST00000523215 TNS2Q63HR2 1409 aa12.65□□□□□ -0.38
ERGIC1-211ENST00000523215 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
ERGIC1-211ENST00000523215 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.38
ERGIC1-211ENST00000523215 ZNF622Q969S3 477 aaKnown RBP eCLIP12.65□□□□□ -0.38
ERGIC1-211ENST00000523215 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
ERGIC1-211ENST00000523215 PKP1Q13835 747 aa12.64□□□□□ -0.39
ERGIC1-211ENST00000523215 SMARCA5O60264 1052 aaPredicted RBP12.63□□□□□ -0.39
ERGIC1-211ENST00000523215 ZNF526Q8TF50 670 aaPredicted RBP12.63□□□□□ -0.39
ERGIC1-211ENST00000523215 MAP7D2Q96T17 732 aa12.63□□□□□ -0.39
ERGIC1-211ENST00000523215 TMX3Q96JJ7 454 aa12.63□□□□□ -0.39
ERGIC1-211ENST00000523215 USP44Q9H0E7 712 aa12.63□□□□□ -0.39
ERGIC1-211ENST00000523215 SGSM2O43147 1006 aa12.62□□□□□ -0.39
ERGIC1-211ENST00000523215 CARMIL3Q8ND23 1372 aa12.62□□□□□ -0.39
ERGIC1-211ENST00000523215 MYCNP04198 464 aaPredicted RBP12.62□□□□□ -0.39
ERGIC1-211ENST00000523215 NASPP49321 788 aaPredicted RBP12.62□□□□□ -0.39
ERGIC1-211ENST00000523215 GPATCH11Q8N954 259 aa12.62□□□□□ -0.39
ERGIC1-211ENST00000523215 CTIFO43310 598 aaKnown RBP12.62□□□□□ -0.39
ERGIC1-211ENST00000523215 HOXC9P31274 260 aa12.62□□□□□ -0.39
ERGIC1-211ENST00000523215 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.62□□□□□ -0.39
ERGIC1-211ENST00000523215 F6X3S4 739 aa12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 IL25Q9H293 177 aa12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 MYO5AQ9Y4I1 1855 aaKnown RBP12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 THEMISQ8N1K5 641 aaPredicted RBP12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 PATL2C9JE40 543 aaKnown RBP12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 GNAI3P08754 354 aa12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 BEND3Q5T5X7 828 aa12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 MTERF4Q7Z6M4 381 aaKnown RBP12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 IL17REQ8NFR9 667 aa12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 SGSM3Q96HU1 749 aa12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 AGXT2Q9BYV1 514 aa12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 BCL9LQ86UU0 1499 aa12.61□□□□□ -0.39
ERGIC1-211ENST00000523215 ST18O60284 1047 aa12.6□□□□□ -0.39
ERGIC1-211ENST00000523215 HMGN5P82970 282 aaKnown RBP12.6□□□□□ -0.39
ERGIC1-211ENST00000523215 SOX12O15370 315 aa12.6□□□□□ -0.39
ERGIC1-211ENST00000523215 LETM1O95202 739 aaPredicted RBP12.6□□□□□ -0.39
ERGIC1-211ENST00000523215 GNAI2P04899 355 aa12.6□□□□□ -0.39
ERGIC1-211ENST00000523215 KCNA6P17658 529 aa12.6□□□□□ -0.39
ERGIC1-211ENST00000523215 ZSWIM6Q9HCJ5 1215 aa12.6□□□□□ -0.39
ERGIC1-211ENST00000523215 NSFL1CQ9UNZ2 370 aaKnown RBP12.6□□□□□ -0.39
ERGIC1-211ENST00000523215 MAST2Q6P0Q8 1798 aa12.59□□□□□ -0.39
ERGIC1-211ENST00000523215 ATRNO75882 1429 aa12.59□□□□□ -0.39
ERGIC1-211ENST00000523215 NID2Q14112 1375 aa12.59□□□□□ -0.39
ERGIC1-211ENST00000523215 HMMRO75330 724 aa12.59□□□□□ -0.39
ERGIC1-211ENST00000523215 HDAC5Q9UQL6 1122 aa12.59□□□□□ -0.39
ERGIC1-211ENST00000523215 SH3BP1Q9Y3L3 701 aa12.59□□□□□ -0.39
ERGIC1-211ENST00000523215 PRIM1P49642 420 aaKnown RBP12.59□□□□□ -0.39
ERGIC1-211ENST00000523215 OS9Q13438 667 aaPredicted RBP12.59□□□□□ -0.39
ERGIC1-211ENST00000523215 ZGPATQ8N5A5 531 aaKnown RBP12.59□□□□□ -0.39
ERGIC1-211ENST00000523215 ITGB4P16144 1822 aa12.59□□□□□ -0.39
ERGIC1-211ENST00000523215 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 1004.8 ms